EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000025041 (Gene tree)
Gene ID: 110260809
Gene Symbol: -
Alias: -
Full Name: rab-like protein 2A
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 15411 bases
Position: chr5:104510587-104525997
Accession: 110260809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000055882	MMR_HSR1	PF01926.23	5.2e-05	1	1
ENSSSCP00000025171	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000023480	-	1339	XM_021092818	ENSSSCP00000025171	170 (aa)	XP_020948477	I3LM50
ENSSSCT00000052906	-	1468	-	ENSSSCP00000055882	153 (aa)	-	A0A287BH71

Gene Model

Click here to download ENSSSCG00000025041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000025041	-	86	35.714	ENSSSCG00000011615	RAB7A	74	35.714
ENSSSCG00000025041	-	70	30.075	ENSSSCG00000035258	RABL3	60	30.075
ENSSSCG00000025041	-	86	35.256	ENSSSCG00000032672	RAB9B	77	35.256
ENSSSCG00000025041	-	83	35.811	ENSSSCG00000012658	RAB33A	53	35.811
ENSSSCG00000025041	-	75	31.304	ENSSSCG00000014828	RAB6A	55	31.304
ENSSSCG00000025041	-	87	34.868	ENSSSCG00000037653	RAB5A	71	34.868
ENSSSCG00000025041	-	87	30.921	ENSSSCG00000014900	RAB30	75	30.921
ENSSSCG00000025041	-	85	33.557	ENSSSCG00000006232	RAB2A	79	33.557
ENSSSCG00000025041	-	67	30.476	ENSSSCG00000027443	MRAS	70	30.822
ENSSSCG00000025041	-	93	31.902	ENSSSCG00000038026	RAB12	67	31.902
ENSSSCG00000025041	-	85	30.872	ENSSSCG00000036503	RAB6B	72	30.872
ENSSSCG00000025041	-	85	33.775	ENSSSCG00000020711	RAB33B	64	34.459
ENSSSCG00000025041	-	82	38.889	ENSSSCG00000028655	RAB18	70	38.889
ENSSSCG00000025041	-	85	35.570	ENSSSCG00000008359	RAB1A	76	35.570
ENSSSCG00000025041	-	75	37.288	ENSSSCG00000007513	RAB22A	60	40.000
ENSSSCG00000025041	-	76	31.356	ENSSSCG00000006564	-	58	31.356
ENSSSCG00000025041	-	89	33.333	ENSSSCG00000005514	RAB14	73	33.333
ENSSSCG00000025041	-	85	36.424	ENSSSCG00000032312	RAB11A	69	36.424
ENSSSCG00000025041	-	85	32.215	ENSSSCG00000029544	RAB2B	77	32.215
ENSSSCG00000025041	-	85	36.424	ENSSSCG00000013600	RAB11B	68	36.424
ENSSSCG00000025041	-	85	37.226	ENSSSCG00000012954	RAB1B	81	36.242
ENSSSCG00000025041	-	85	30.201	ENSSSCG00000002280	RAB15	70	30.201
ENSSSCG00000025041	-	86	35.256	ENSSSCG00000012123	RAB9A	77	35.256
ENSSSCG00000025041	-	75	31.624	ENSSSCG00000024233	RAB39B	55	31.624
ENSSSCG00000025041	-	85	31.757	ENSSSCG00000033876	RAB35	74	31.757
ENSSSCG00000025041	-	85	30.872	ENSSSCG00000039186	RAB25	70	30.872
ENSSSCG00000025041	-	87	35.526	ENSSSCG00000032467	RAB5C	70	35.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025041	-	100	90.588	ENSG00000079974	RABL2B	100	91.919	Homo_sapiens
ENSSSCG00000025041	-	100	90.588	ENSG00000144134	RABL2A	98	92.929	Homo_sapiens
ENSSSCG00000025041	-	100	80.000	ENSAPOG00000023708	rabl2	76	80.000	Acanthochromis_polyacanthus
ENSSSCG00000025041	-	100	90.805	ENSAMEG00000003173	-	77	90.805	Ailuropoda_melanoleuca
ENSSSCG00000025041	-	100	76.471	ENSACIG00000000670	rabl2	77	76.471	Amphilophus_citrinellus
ENSSSCG00000025041	-	100	80.588	ENSAOCG00000008069	rabl2	76	80.588	Amphiprion_ocellaris
ENSSSCG00000025041	-	100	80.000	ENSAPEG00000003164	rabl2	76	80.000	Amphiprion_percula
ENSSSCG00000025041	-	100	80.588	ENSATEG00000001111	rabl2	77	80.588	Anabas_testudineus
ENSSSCG00000025041	-	95	86.957	ENSACAG00000000418	-	91	86.957	Anolis_carolinensis
ENSSSCG00000025041	-	100	90.588	ENSANAG00000021001	-	74	90.588	Aotus_nancymaae
ENSSSCG00000025041	-	100	78.824	ENSACLG00000025632	rabl2	77	78.824	Astatotilapia_calliptera
ENSSSCG00000025041	-	100	80.000	ENSAMXG00000040611	rabl2	77	80.000	Astyanax_mexicanus
ENSSSCG00000025041	-	100	94.706	ENSBTAG00000004876	RABL2B	75	94.706	Bos_taurus
ENSSSCG00000025041	-	100	90.000	ENSCJAG00000018414	-	74	90.000	Callithrix_jacchus
ENSSSCG00000025041	-	100	91.765	ENSCAFG00020006938	-	76	91.765	Canis_lupus_dingo
ENSSSCG00000025041	-	100	94.118	ENSCHIG00000000591	-	74	94.118	Capra_hircus
ENSSSCG00000025041	-	100	87.059	ENSTSYG00000004323	-	74	87.059	Carlito_syrichta
ENSSSCG00000025041	-	100	89.412	ENSCPOG00000026899	-	77	89.412	Cavia_porcellus
ENSSSCG00000025041	-	100	91.765	ENSCCAG00000025944	-	74	91.765	Cebus_capucinus
ENSSSCG00000025041	-	100	88.824	ENSCATG00000034307	-	74	88.824	Cercocebus_atys
ENSSSCG00000025041	-	100	90.588	ENSCLAG00000017218	-	76	90.588	Chinchilla_lanigera
ENSSSCG00000025041	-	100	90.000	ENSCSAG00000004698	-	74	90.000	Chlorocebus_sabaeus
ENSSSCG00000025041	-	100	83.237	ENSCPBG00000011715	-	77	83.237	Chrysemys_picta_bellii
ENSSSCG00000025041	-	89	67.550	ENSCING00000004961	-	71	67.550	Ciona_intestinalis
ENSSSCG00000025041	-	92	66.879	ENSCSAVG00000006042	-	75	66.879	Ciona_savignyi
ENSSSCG00000025041	-	100	88.235	ENSCANG00000030879	-	74	88.235	Colobus_angolensis_palliatus
ENSSSCG00000025041	-	100	90.588	ENSCGRG00001021894	Rabl2	76	90.588	Cricetulus_griseus_chok1gshd
ENSSSCG00000025041	-	100	78.235	ENSCSEG00000005479	rabl2	76	78.235	Cynoglossus_semilaevis
ENSSSCG00000025041	-	95	81.366	ENSCVAG00000011432	rabl2	74	81.366	Cyprinodon_variegatus
ENSSSCG00000025041	-	95	79.630	ENSDARG00000063321	rabl2	74	79.630	Danio_rerio
ENSSSCG00000025041	-	100	91.765	ENSDNOG00000035151	-	77	91.765	Dasypus_novemcinctus
ENSSSCG00000025041	-	100	89.412	ENSDORG00000000003	Rabl2	76	89.412	Dipodomys_ordii
ENSSSCG00000025041	-	100	93.529	ENSEASG00005008239	-	76	93.529	Equus_asinus_asinus
ENSSSCG00000025041	-	100	93.529	ENSECAG00000026942	-	76	93.529	Equus_caballus
ENSSSCG00000025041	-	100	94.706	ENSFCAG00000033642	-	76	94.706	Felis_catus
ENSSSCG00000025041	-	100	90.000	ENSFDAG00000002113	-	76	90.000	Fukomys_damarensis
ENSSSCG00000025041	-	100	80.588	ENSFHEG00000015015	rabl2	64	80.588	Fundulus_heteroclitus
ENSSSCG00000025041	-	100	77.059	ENSGMOG00000018928	rabl2	86	77.059	Gadus_morhua
ENSSSCG00000025041	-	100	80.588	ENSGALG00000032458	RABL2B	76	80.588	Gallus_gallus
ENSSSCG00000025041	-	95	81.366	ENSGAFG00000005188	rabl2	72	81.366	Gambusia_affinis
ENSSSCG00000025041	-	100	77.647	ENSGACG00000012474	rabl2	77	77.647	Gasterosteus_aculeatus
ENSSSCG00000025041	-	100	78.824	ENSHBUG00000010964	rabl2	77	78.824	Haplochromis_burtoni
ENSSSCG00000025041	-	100	90.588	ENSHGLG00000005750	-	76	90.588	Heterocephalus_glaber_female
ENSSSCG00000025041	-	100	90.588	ENSHGLG00100016281	-	76	90.588	Heterocephalus_glaber_male
ENSSSCG00000025041	-	100	91.176	ENSSTOG00000002723	-	76	91.176	Ictidomys_tridecemlineatus
ENSSSCG00000025041	-	100	89.412	ENSJJAG00000010792	Rabl2	76	89.412	Jaculus_jaculus
ENSSSCG00000025041	-	100	78.824	ENSKMAG00000012723	rabl2	76	78.824	Kryptolebias_marmoratus
ENSSSCG00000025041	-	100	80.000	ENSLBEG00000003644	rabl2	76	80.000	Labrus_bergylta
ENSSSCG00000025041	-	100	80.588	ENSLACG00000003722	rabl2	76	80.588	Latimeria_chalumnae
ENSSSCG00000025041	-	100	81.176	ENSLOCG00000016767	rabl2	75	81.176	Lepisosteus_oculatus
ENSSSCG00000025041	-	100	90.000	ENSMFAG00000044775	-	74	90.000	Macaca_fascicularis
ENSSSCG00000025041	-	100	90.000	ENSMMUG00000022914	RABL2B	74	90.000	Macaca_mulatta
ENSSSCG00000025041	-	100	89.412	ENSMNEG00000028460	-	74	89.412	Macaca_nemestrina
ENSSSCG00000025041	-	100	88.235	ENSMLEG00000032621	-	74	88.235	Mandrillus_leucophaeus
ENSSSCG00000025041	-	100	79.412	ENSMAMG00000008168	rabl2	76	79.412	Mastacembelus_armatus
ENSSSCG00000025041	-	100	78.824	ENSMZEG00005019758	rabl2	79	78.824	Maylandia_zebra
ENSSSCG00000025041	-	100	90.588	ENSMAUG00000010955	Rabl2	77	90.588	Mesocricetus_auratus
ENSSSCG00000025041	-	100	92.353	ENSMICG00000031301	-	74	92.353	Microcebus_murinus
ENSSSCG00000025041	-	100	90.000	ENSMOCG00000002775	Rabl2	76	90.000	Microtus_ochrogaster
ENSSSCG00000025041	-	95	91.304	ENSMODG00000010838	-	74	91.304	Monodelphis_domestica
ENSSSCG00000025041	-	100	78.824	ENSMALG00000005944	rabl2	76	78.824	Monopterus_albus
ENSSSCG00000025041	-	100	89.412	MGP_CAROLIEiJ_G0020176	Rabl2	75	89.412	Mus_caroli
ENSSSCG00000025041	-	100	88.235	ENSMUSG00000022621	Rabl2	76	88.235	Mus_musculus
ENSSSCG00000025041	-	100	88.824	MGP_PahariEiJ_G0020181	Rabl2	76	88.824	Mus_pahari
ENSSSCG00000025041	-	100	88.235	MGP_SPRETEiJ_G0021073	Rabl2	76	88.235	Mus_spretus
ENSSSCG00000025041	-	100	92.941	ENSMPUG00000001806	-	76	92.941	Mustela_putorius_furo
ENSSSCG00000025041	-	100	88.824	ENSNGAG00000012843	Rabl2	74	88.824	Nannospalax_galili
ENSSSCG00000025041	-	100	78.824	ENSNBRG00000000489	rabl2	77	78.824	Neolamprologus_brichardi
ENSSSCG00000025041	-	100	89.412	ENSNLEG00000030435	-	74	89.412	Nomascus_leucogenys
ENSSSCG00000025041	-	100	88.824	ENSODEG00000015650	-	76	88.824	Octodon_degus
ENSSSCG00000025041	-	100	78.824	ENSONIG00000014885	rabl2	77	78.824	Oreochromis_niloticus
ENSSSCG00000025041	-	100	77.059	ENSORLG00000009874	rabl2	75	77.059	Oryzias_latipes
ENSSSCG00000025041	-	100	77.059	ENSORLG00020001721	rabl2	75	77.059	Oryzias_latipes_hni
ENSSSCG00000025041	-	100	77.059	ENSORLG00015014268	rabl2	75	77.059	Oryzias_latipes_hsok
ENSSSCG00000025041	-	100	78.235	ENSOMEG00000008576	rabl2	78	78.235	Oryzias_melastigma
ENSSSCG00000025041	-	100	93.529	ENSOGAG00000009123	-	74	93.529	Otolemur_garnettii
ENSSSCG00000025041	-	100	94.706	ENSPPRG00000014642	-	74	94.706	Panthera_pardus
ENSSSCG00000025041	-	100	94.706	ENSPTIG00000018747	-	76	94.706	Panthera_tigris_altaica
ENSSSCG00000025041	-	100	90.000	ENSPTRG00000014555	-	71	90.000	Pan_troglodytes
ENSSSCG00000025041	-	100	89.412	ENSPANG00000036121	-	71	89.412	Papio_anubis
ENSSSCG00000025041	-	95	82.609	ENSPKIG00000025372	rabl2	72	82.609	Paramormyrops_kingsleyae
ENSSSCG00000025041	-	100	84.393	ENSPSIG00000014041	-	77	84.393	Pelodiscus_sinensis
ENSSSCG00000025041	-	100	77.059	ENSPMGG00000012946	rabl2	83	77.059	Periophthalmus_magnuspinnatus
ENSSSCG00000025041	-	100	90.588	ENSPEMG00000024045	Rabl2	76	90.588	Peromyscus_maniculatus_bairdii
ENSSSCG00000025041	-	95	89.441	ENSPCIG00000012436	-	68	87.879	Phascolarctos_cinereus
ENSSSCG00000025041	-	95	81.595	ENSPFOG00000017960	rabl2	73	81.595	Poecilia_formosa
ENSSSCG00000025041	-	95	82.609	ENSPLAG00000015685	rabl2	73	82.609	Poecilia_latipinna
ENSSSCG00000025041	-	95	82.609	ENSPMEG00000004703	rabl2	73	82.609	Poecilia_mexicana
ENSSSCG00000025041	-	98	79.641	ENSPREG00000014761	rabl2	82	79.641	Poecilia_reticulata
ENSSSCG00000025041	-	100	89.412	ENSPPYG00000012000	-	74	89.412	Pongo_abelii
ENSSSCG00000025041	-	100	93.529	ENSPCOG00000024865	-	74	93.529	Propithecus_coquereli
ENSSSCG00000025041	-	100	91.176	ENSPVAG00000004539	-	71	91.176	Pteropus_vampyrus
ENSSSCG00000025041	-	100	78.824	ENSPNYG00000004845	rabl2	77	78.824	Pundamilia_nyererei
ENSSSCG00000025041	-	100	80.000	ENSPNAG00000024254	rabl2	76	80.000	Pygocentrus_nattereri
ENSSSCG00000025041	-	100	89.412	ENSRNOG00000013947	Rabl2	68	89.412	Rattus_norvegicus
ENSSSCG00000025041	-	100	89.412	ENSRBIG00000033607	-	74	89.412	Rhinopithecus_bieti
ENSSSCG00000025041	-	100	90.000	ENSRROG00000031130	-	74	90.000	Rhinopithecus_roxellana
ENSSSCG00000025041	-	100	91.765	ENSSBOG00000033266	-	74	91.765	Saimiri_boliviensis_boliviensis
ENSSSCG00000025041	-	100	79.412	ENSSFOG00015020738	rabl2	76	79.412	Scleropages_formosus
ENSSSCG00000025041	-	100	79.412	ENSSMAG00000004606	rabl2	76	79.412	Scophthalmus_maximus
ENSSSCG00000025041	-	100	79.412	ENSSDUG00000014765	rabl2	76	79.412	Seriola_dumerili
ENSSSCG00000025041	-	91	83.766	ENSTGUG00000016028	-	74	83.766	Taeniopygia_guttata
ENSSSCG00000025041	-	100	78.824	ENSTRUG00000012454	rabl2	76	78.824	Takifugu_rubripes
ENSSSCG00000025041	-	100	78.235	ENSTNIG00000017951	rabl2	76	78.235	Tetraodon_nigroviridis
ENSSSCG00000025041	-	100	92.941	ENSUAMG00000015761	-	76	92.941	Ursus_americanus
ENSSSCG00000025041	-	100	93.529	ENSUMAG00000017116	-	76	93.529	Ursus_maritimus
ENSSSCG00000025041	-	100	91.765	ENSVVUG00000025761	-	76	91.765	Vulpes_vulpes
ENSSSCG00000025041	-	100	80.588	ENSXETG00000015712	rabl2b	76	80.588	Xenopus_tropicalis
ENSSSCG00000025041	-	95	82.609	ENSXMAG00000004569	rabl2	72	82.609	Xiphophorus_maculatus