EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000025305 (Gene tree)
Gene ID: 100626539
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 10120 bases
Position: chr3:131268911-131279030
Accession: 100626539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027507	RNase_H	PF00075.24	1.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000027102	RNASEH1-201	3440	XM_005662770	ENSSSCP00000027507	287 (aa)	XP_005662827	I3LTQ9

Gene Model

Click here to download ENSSSCG00000025305's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025305	RNASEH1	99	78.521	ENSG00000171865	RNASEH1	92	81.439	Homo_sapiens
ENSSSCG00000025305	RNASEH1	99	52.901	ENSAPOG00000000412	rnaseh1	89	55.805	Acanthochromis_polyacanthus
ENSSSCG00000025305	RNASEH1	93	80.075	ENSAMEG00000018433	RNASEH1	99	78.521	Ailuropoda_melanoleuca
ENSSSCG00000025305	RNASEH1	99	52.881	ENSACIG00000014666	rnaseh1	87	55.970	Amphilophus_citrinellus
ENSSSCG00000025305	RNASEH1	99	54.266	ENSAOCG00000015210	rnaseh1	89	57.143	Amphiprion_ocellaris
ENSSSCG00000025305	RNASEH1	99	54.608	ENSAPEG00000014104	rnaseh1	89	57.519	Amphiprion_percula
ENSSSCG00000025305	RNASEH1	99	53.061	ENSATEG00000000598	rnaseh1	94	55.805	Anabas_testudineus
ENSSSCG00000025305	RNASEH1	85	58.915	ENSAPLG00000001961	RNASEH1	100	58.915	Anas_platyrhynchos
ENSSSCG00000025305	RNASEH1	89	51.827	ENSACAG00000016857	rnaseh1	91	51.827	Anolis_carolinensis
ENSSSCG00000025305	RNASEH1	99	77.817	ENSANAG00000024055	RNASEH1	99	77.817	Aotus_nancymaae
ENSSSCG00000025305	RNASEH1	99	51.163	ENSACLG00000006741	rnaseh1	88	54.015	Astatotilapia_calliptera
ENSSSCG00000025305	RNASEH1	91	52.692	ENSAMXG00000042940	rnaseh1	98	51.493	Astyanax_mexicanus
ENSSSCG00000025305	RNASEH1	99	81.818	ENSBTAG00000016235	RNASEH1	94	83.774	Bos_taurus
ENSSSCG00000025305	RNASEH1	89	40.392	WBGene00004382	rnh-1.0	95	40.392	Caenorhabditis_elegans
ENSSSCG00000025305	RNASEH1	99	77.083	ENSCJAG00000035450	RNASEH1	99	77.083	Callithrix_jacchus
ENSSSCG00000025305	RNASEH1	99	78.169	ENSCAFG00000003259	RNASEH1	99	78.169	Canis_familiaris
ENSSSCG00000025305	RNASEH1	53	87.417	ENSCAFG00020004994	RNASEH1	97	87.417	Canis_lupus_dingo
ENSSSCG00000025305	RNASEH1	99	81.119	ENSCHIG00000022264	-	99	81.119	Capra_hircus
ENSSSCG00000025305	RNASEH1	83	68.067	ENSCHIG00000022230	-	99	68.067	Capra_hircus
ENSSSCG00000025305	RNASEH1	99	79.225	ENSTSYG00000012926	RNASEH1	98	79.225	Carlito_syrichta
ENSSSCG00000025305	RNASEH1	84	81.328	ENSCAPG00000004813	RNASEH1	99	81.328	Cavia_aperea
ENSSSCG00000025305	RNASEH1	99	77.193	ENSCPOG00000022278	Rnaseh1	90	79.926	Cavia_porcellus
ENSSSCG00000025305	RNASEH1	99	77.431	ENSCCAG00000038017	RNASEH1	99	77.431	Cebus_capucinus
ENSSSCG00000025305	RNASEH1	99	69.718	ENSCATG00000016818	-	92	72.348	Cercocebus_atys
ENSSSCG00000025305	RNASEH1	99	76.408	ENSCATG00000016515	-	93	79.104	Cercocebus_atys
ENSSSCG00000025305	RNASEH1	99	76.056	ENSCLAG00000002440	RNASEH1	93	79.026	Chinchilla_lanigera
ENSSSCG00000025305	RNASEH1	99	76.761	ENSCSAG00000006943	RNASEH1	93	79.104	Chlorocebus_sabaeus
ENSSSCG00000025305	RNASEH1	70	79.104	ENSCHOG00000008547	RNASEH1	99	79.104	Choloepus_hoffmanni
ENSSSCG00000025305	RNASEH1	89	61.993	ENSCPBG00000021620	RNASEH1	98	61.993	Chrysemys_picta_bellii
ENSSSCG00000025305	RNASEH1	94	38.062	ENSCING00000014054	-	96	38.328	Ciona_intestinalis
ENSSSCG00000025305	RNASEH1	75	36.726	ENSCSAVG00000000009	-	96	36.726	Ciona_savignyi
ENSSSCG00000025305	RNASEH1	99	75.704	ENSCANG00000037763	RNASEH1	93	78.358	Colobus_angolensis_palliatus
ENSSSCG00000025305	RNASEH1	99	74.825	ENSCGRG00001008950	Rnaseh1	93	77.820	Cricetulus_griseus_chok1gshd
ENSSSCG00000025305	RNASEH1	99	74.825	ENSCGRG00000006029	Rnaseh1	93	77.820	Cricetulus_griseus_crigri
ENSSSCG00000025305	RNASEH1	98	50.877	ENSCSEG00000005741	rnaseh1	93	51.493	Cynoglossus_semilaevis
ENSSSCG00000025305	RNASEH1	90	55.185	ENSCVAG00000018717	rnaseh1	88	55.185	Cyprinodon_variegatus
ENSSSCG00000025305	RNASEH1	91	54.982	ENSDARG00000042571	rnaseh1	98	54.982	Danio_rerio
ENSSSCG00000025305	RNASEH1	99	74.648	ENSDNOG00000016056	RNASEH1	90	79.151	Dasypus_novemcinctus
ENSSSCG00000025305	RNASEH1	99	75.874	ENSDORG00000000704	Rnaseh1	93	77.903	Dipodomys_ordii
ENSSSCG00000025305	RNASEH1	90	36.949	FBgn0023171	rnh1	94	36.949	Drosophila_melanogaster
ENSSSCG00000025305	RNASEH1	99	74.296	ENSETEG00000012674	RNASEH1	99	74.296	Echinops_telfairi
ENSSSCG00000025305	RNASEH1	89	44.637	ENSEBUG00000008898	rnaseh1	98	44.637	Eptatretus_burgeri
ENSSSCG00000025305	RNASEH1	92	44.403	ENSEBUG00000006116	rnaseh1	80	44.403	Eptatretus_burgeri
ENSSSCG00000025305	RNASEH1	99	84.155	ENSEASG00005022200	RNASEH1	97	84.155	Equus_asinus_asinus
ENSSSCG00000025305	RNASEH1	99	84.155	ENSECAG00000020695	RNASEH1	97	84.155	Equus_caballus
ENSSSCG00000025305	RNASEH1	90	55.556	ENSELUG00000010112	rnaseh1	90	55.556	Esox_lucius
ENSSSCG00000025305	RNASEH1	99	79.577	ENSFCAG00000025832	RNASEH1	99	79.577	Felis_catus
ENSSSCG00000025305	RNASEH1	97	55.892	ENSFALG00000002069	RNASEH1	95	57.244	Ficedula_albicollis
ENSSSCG00000025305	RNASEH1	99	71.127	ENSFDAG00000002035	RNASEH1	81	75.191	Fukomys_damarensis
ENSSSCG00000025305	RNASEH1	98	52.083	ENSGMOG00000013818	rnaseh1	88	54.373	Gadus_morhua
ENSSSCG00000025305	RNASEH1	90	61.679	ENSGALG00000016389	RNASEH1	92	61.679	Gallus_gallus
ENSSSCG00000025305	RNASEH1	90	57.194	ENSGAFG00000001776	rnaseh1	91	57.194	Gambusia_affinis
ENSSSCG00000025305	RNASEH1	98	51.689	ENSGACG00000011935	rnaseh1	88	54.478	Gasterosteus_aculeatus
ENSSSCG00000025305	RNASEH1	89	59.410	ENSGAGG00000009150	RNASEH1	61	60.886	Gopherus_agassizii
ENSSSCG00000025305	RNASEH1	99	78.169	ENSGGOG00000034822	RNASEH1	92	81.061	Gorilla_gorilla
ENSSSCG00000025305	RNASEH1	99	51.342	ENSHBUG00000004666	rnaseh1	88	54.982	Haplochromis_burtoni
ENSSSCG00000025305	RNASEH1	99	72.887	ENSHGLG00000002585	Rnaseh1	85	75.379	Heterocephalus_glaber_female
ENSSSCG00000025305	RNASEH1	99	72.887	ENSHGLG00100005105	Rnaseh1	85	75.379	Heterocephalus_glaber_male
ENSSSCG00000025305	RNASEH1	98	51.667	ENSHCOG00000012329	rnaseh1	88	53.731	Hippocampus_comes
ENSSSCG00000025305	RNASEH1	99	55.631	ENSIPUG00000023060	rnaseh1	97	58.271	Ictalurus_punctatus
ENSSSCG00000025305	RNASEH1	90	78.599	ENSSTOG00000012774	RNASEH1	94	78.113	Ictidomys_tridecemlineatus
ENSSSCG00000025305	RNASEH1	90	74.517	ENSJJAG00000020238	Rnaseh1	93	77.824	Jaculus_jaculus
ENSSSCG00000025305	RNASEH1	99	61.972	ENSJJAG00000008994	-	89	66.534	Jaculus_jaculus
ENSSSCG00000025305	RNASEH1	99	69.718	ENSJJAG00000021481	-	92	72.348	Jaculus_jaculus
ENSSSCG00000025305	RNASEH1	90	55.805	ENSKMAG00000001373	rnaseh1	89	55.805	Kryptolebias_marmoratus
ENSSSCG00000025305	RNASEH1	98	52.098	ENSLBEG00000004480	rnaseh1	95	53.612	Labrus_bergylta
ENSSSCG00000025305	RNASEH1	89	52.364	ENSLACG00000007100	RNASEH1	87	52.364	Latimeria_chalumnae
ENSSSCG00000025305	RNASEH1	90	55.435	ENSLOCG00000017212	rnaseh1	97	56.458	Lepisosteus_oculatus
ENSSSCG00000025305	RNASEH1	99	78.873	ENSLAFG00000015091	RNASEH1	99	78.873	Loxodonta_africana
ENSSSCG00000025305	RNASEH1	99	77.113	ENSMFAG00000000063	-	93	79.478	Macaca_fascicularis
ENSSSCG00000025305	RNASEH1	99	69.014	ENSMFAG00000002323	-	92	71.591	Macaca_fascicularis
ENSSSCG00000025305	RNASEH1	99	68.662	ENSMMUG00000019280	-	92	71.212	Macaca_mulatta
ENSSSCG00000025305	RNASEH1	99	69.718	ENSMNEG00000029676	-	92	72.348	Macaca_nemestrina
ENSSSCG00000025305	RNASEH1	99	77.465	ENSMNEG00000040183	-	93	79.851	Macaca_nemestrina
ENSSSCG00000025305	RNASEH1	99	70.775	ENSMLEG00000028662	-	90	75.290	Mandrillus_leucophaeus
ENSSSCG00000025305	RNASEH1	84	80.833	ENSMLEG00000039352	-	99	80.833	Mandrillus_leucophaeus
ENSSSCG00000025305	RNASEH1	99	54.362	ENSMAMG00000019725	rnaseh1	94	57.463	Mastacembelus_armatus
ENSSSCG00000025305	RNASEH1	99	51.163	ENSMZEG00005013006	rnaseh1	88	54.015	Maylandia_zebra
ENSSSCG00000025305	RNASEH1	80	59.109	ENSMGAG00000013979	RNASEH1	99	59.109	Meleagris_gallopavo
ENSSSCG00000025305	RNASEH1	99	75.352	ENSMAUG00000014957	Rnaseh1	92	78.409	Mesocricetus_auratus
ENSSSCG00000025305	RNASEH1	99	82.042	ENSMICG00000033156	RNASEH1	98	82.042	Microcebus_murinus
ENSSSCG00000025305	RNASEH1	99	74.828	ENSMOCG00000015522	Rnaseh1	92	77.778	Microtus_ochrogaster
ENSSSCG00000025305	RNASEH1	99	50.000	ENSMMOG00000015902	rnaseh1	88	52.416	Mola_mola
ENSSSCG00000025305	RNASEH1	79	56.388	ENSMODG00000028814	-	92	56.388	Monodelphis_domestica
ENSSSCG00000025305	RNASEH1	99	66.899	ENSMODG00000014491	-	93	69.630	Monodelphis_domestica
ENSSSCG00000025305	RNASEH1	97	52.962	ENSMALG00000010565	rnaseh1	92	54.152	Monopterus_albus
ENSSSCG00000025305	RNASEH1	99	73.239	MGP_CAROLIEiJ_G0017660	Rnaseh1	92	76.136	Mus_caroli
ENSSSCG00000025305	RNASEH1	99	73.592	ENSMUSG00000020630	Rnaseh1	92	76.515	Mus_musculus
ENSSSCG00000025305	RNASEH1	99	73.239	MGP_PahariEiJ_G0029418	Rnaseh1	92	76.894	Mus_pahari
ENSSSCG00000025305	RNASEH1	99	73.592	MGP_SPRETEiJ_G0018502	Rnaseh1	92	76.515	Mus_spretus
ENSSSCG00000025305	RNASEH1	68	81.538	ENSMPUG00000012984	RNASEH1	94	81.538	Mustela_putorius_furo
ENSSSCG00000025305	RNASEH1	96	75.725	ENSNGAG00000015966	Rnaseh1	87	78.195	Nannospalax_galili
ENSSSCG00000025305	RNASEH1	90	54.380	ENSNBRG00000008739	rnaseh1	88	54.380	Neolamprologus_brichardi
ENSSSCG00000025305	RNASEH1	99	66.783	ENSNLEG00000015400	RNASEH1	91	68.421	Nomascus_leucogenys
ENSSSCG00000025305	RNASEH1	84	72.314	ENSNLEG00000000059	-	90	72.314	Nomascus_leucogenys
ENSSSCG00000025305	RNASEH1	99	48.421	ENSMEUG00000003610	-	93	49.254	Notamacropus_eugenii
ENSSSCG00000025305	RNASEH1	99	70.979	ENSOPRG00000005072	RNASEH1	93	73.408	Ochotona_princeps
ENSSSCG00000025305	RNASEH1	99	74.296	ENSODEG00000000235	Rnaseh1	89	77.947	Octodon_degus
ENSSSCG00000025305	RNASEH1	90	54.613	ENSONIG00000018697	rnaseh1	97	54.613	Oreochromis_niloticus
ENSSSCG00000025305	RNASEH1	99	77.817	ENSOCUG00000006117	RNASEH1	92	80.916	Oryctolagus_cuniculus
ENSSSCG00000025305	RNASEH1	90	54.580	ENSORLG00000018127	rnaseh1	95	55.431	Oryzias_latipes
ENSSSCG00000025305	RNASEH1	99	51.903	ENSORLG00020013660	rnaseh1	88	55.431	Oryzias_latipes_hni
ENSSSCG00000025305	RNASEH1	99	51.903	ENSORLG00015011338	rnaseh1	88	55.431	Oryzias_latipes_hsok
ENSSSCG00000025305	RNASEH1	91	50.186	ENSOMEG00000004710	rnaseh1	90	53.086	Oryzias_melastigma
ENSSSCG00000025305	RNASEH1	99	79.443	ENSOGAG00000017176	RNASEH1	99	79.443	Otolemur_garnettii
ENSSSCG00000025305	RNASEH1	99	69.863	ENSOARG00000005386	RNASEH1	99	69.863	Ovis_aries
ENSSSCG00000025305	RNASEH1	99	78.521	ENSPPAG00000034221	RNASEH1	92	81.439	Pan_paniscus
ENSSSCG00000025305	RNASEH1	99	79.930	ENSPPRG00000015513	RNASEH1	99	79.930	Panthera_pardus
ENSSSCG00000025305	RNASEH1	84	81.250	ENSPTIG00000019034	RNASEH1	84	81.250	Panthera_tigris_altaica
ENSSSCG00000025305	RNASEH1	92	69.403	ENSPTRG00000043403	-	94	72.177	Pan_troglodytes
ENSSSCG00000025305	RNASEH1	99	78.521	ENSPTRG00000011614	RNASEH1	92	81.439	Pan_troglodytes
ENSSSCG00000025305	RNASEH1	99	76.408	ENSPANG00000000443	RNASEH1	99	79.012	Papio_anubis
ENSSSCG00000025305	RNASEH1	99	66.901	ENSPANG00000018246	-	92	69.318	Papio_anubis
ENSSSCG00000025305	RNASEH1	89	49.635	ENSPKIG00000003146	rnaseh1	97	49.635	Paramormyrops_kingsleyae
ENSSSCG00000025305	RNASEH1	89	60.300	ENSPSIG00000002937	RNASEH1	98	60.300	Pelodiscus_sinensis
ENSSSCG00000025305	RNASEH1	89	56.471	ENSPMGG00000017463	rnaseh1	90	56.471	Periophthalmus_magnuspinnatus
ENSSSCG00000025305	RNASEH1	99	73.333	ENSPEMG00000022465	-	92	76.981	Peromyscus_maniculatus_bairdii
ENSSSCG00000025305	RNASEH1	99	62.807	ENSPCIG00000023334	-	89	66.667	Phascolarctos_cinereus
ENSSSCG00000025305	RNASEH1	90	56.835	ENSPFOG00000002841	rnaseh1	91	56.835	Poecilia_formosa
ENSSSCG00000025305	RNASEH1	64	50.259	ENSPLAG00000021349	-	74	50.259	Poecilia_latipinna
ENSSSCG00000025305	RNASEH1	97	53.770	ENSPMEG00000016826	rnaseh1	91	57.194	Poecilia_mexicana
ENSSSCG00000025305	RNASEH1	99	53.642	ENSPREG00000012197	rnaseh1	91	56.727	Poecilia_reticulata
ENSSSCG00000025305	RNASEH1	99	67.254	ENSPPYG00000025873	RNASEH1	91	69.318	Pongo_abelii
ENSSSCG00000025305	RNASEH1	91	73.664	ENSPPYG00000008067	-	93	76.446	Pongo_abelii
ENSSSCG00000025305	RNASEH1	99	74.476	ENSPCAG00000002500	RNASEH1	99	74.737	Procavia_capensis
ENSSSCG00000025305	RNASEH1	99	74.648	ENSPCOG00000019444	RNASEH1	98	74.648	Propithecus_coquereli
ENSSSCG00000025305	RNASEH1	99	77.193	ENSPVAG00000002070	RNASEH1	99	77.193	Pteropus_vampyrus
ENSSSCG00000025305	RNASEH1	99	50.831	ENSPNYG00000001292	rnaseh1	88	53.650	Pundamilia_nyererei
ENSSSCG00000025305	RNASEH1	91	59.551	ENSPNAG00000022344	rnaseh1	91	59.551	Pygocentrus_nattereri
ENSSSCG00000025305	RNASEH1	99	74.296	ENSRNOG00000008584	Rnaseh1	92	77.273	Rattus_norvegicus
ENSSSCG00000025305	RNASEH1	99	76.056	ENSRBIG00000034222	RNASEH1	92	78.358	Rhinopithecus_bieti
ENSSSCG00000025305	RNASEH1	99	76.408	ENSRROG00000041761	RNASEH1	92	78.731	Rhinopithecus_roxellana
ENSSSCG00000025305	RNASEH1	89	45.588	YMR234W	-	91	45.588	Saccharomyces_cerevisiae
ENSSSCG00000025305	RNASEH1	99	75.694	ENSSBOG00000025411	RNASEH1	99	75.694	Saimiri_boliviensis_boliviensis
ENSSSCG00000025305	RNASEH1	99	66.316	ENSSHAG00000013051	RNASEH1	89	70.115	Sarcophilus_harrisii
ENSSSCG00000025305	RNASEH1	90	51.938	ENSSFOG00015002709	rnaseh1	91	51.429	Scleropages_formosus
ENSSSCG00000025305	RNASEH1	99	51.186	ENSSMAG00000007586	rnaseh1	88	54.887	Scophthalmus_maximus
ENSSSCG00000025305	RNASEH1	90	54.851	ENSSDUG00000008217	rnaseh1	94	54.851	Seriola_dumerili
ENSSSCG00000025305	RNASEH1	94	53.710	ENSSLDG00000000442	rnaseh1	94	56.299	Seriola_lalandi_dorsalis
ENSSSCG00000025305	RNASEH1	96	55.517	ENSSPUG00000006644	RNASEH1	94	56.884	Sphenodon_punctatus
ENSSSCG00000025305	RNASEH1	99	53.741	ENSSPAG00000009353	rnaseh1	88	56.554	Stegastes_partitus
ENSSSCG00000025305	RNASEH1	97	57.047	ENSTGUG00000012980	RNASEH1	95	58.042	Taeniopygia_guttata
ENSSSCG00000025305	RNASEH1	93	54.064	ENSTRUG00000015774	rnaseh1	96	55.311	Takifugu_rubripes
ENSSSCG00000025305	RNASEH1	90	58.242	ENSTNIG00000010715	rnaseh1	96	58.242	Tetraodon_nigroviridis
ENSSSCG00000025305	RNASEH1	99	77.895	ENSTTRG00000001615	RNASEH1	99	77.895	Tursiops_truncatus
ENSSSCG00000025305	RNASEH1	55	84.906	ENSUAMG00000018254	RNASEH1	84	83.951	Ursus_americanus
ENSSSCG00000025305	RNASEH1	68	77.041	ENSUMAG00000003941	RNASEH1	65	77.041	Ursus_maritimus
ENSSSCG00000025305	RNASEH1	99	71.579	ENSVPAG00000011589	RNASEH1	99	71.579	Vicugna_pacos
ENSSSCG00000025305	RNASEH1	99	78.521	ENSVVUG00000008633	RNASEH1	89	78.521	Vulpes_vulpes
ENSSSCG00000025305	RNASEH1	99	50.847	ENSXETG00000001212	rnaseh1	91	54.444	Xenopus_tropicalis
ENSSSCG00000025305	RNASEH1	90	43.580	ENSXETG00000030371	-	100	43.580	Xenopus_tropicalis
ENSSSCG00000025305	RNASEH1	89	55.474	ENSXMAG00000002357	rnaseh1	89	55.474	Xiphophorus_maculatus