EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000025651 (Gene tree)
Gene ID: 100620441
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 47150 bases
Position: chr13:98411158-98458307
Accession: 100620441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024610	GTP_EFTU	PF00009.27	4.7e-63	1	1
ENSSSCP00000045035	GTP_EFTU	PF00009.27	4.9e-63	1	1
ENSSSCP00000024610	GTP_EFTU_D2	PF03144.25	5.4e-17	1	1
ENSSSCP00000045035	GTP_EFTU_D2	PF03144.25	5.7e-17	1	1
ENSSSCP00000024610	EFG_IV	PF03764.18	1.2e-34	1	1
ENSSSCP00000045035	EFG_IV	PF03764.18	1.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037979	GFM1-201	5554	XM_003358643	ENSSSCP00000045035	754 (aa)	XP_003358691	A0A287AM95
ENSSSCT00000028063	GFM1-202	3898	XM_013982167	ENSSSCP00000024610	735 (aa)	XP_013837621	I3LKJ6

Gene Model

Click here to download ENSSSCG00000025651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000025651	GFM1	52	33.333	ENSSSCG00000008807	GUF1	55	37.255
ENSSSCG00000025651	GFM1	71	38.926	ENSSSCG00000025675	EEF2	72	38.926
ENSSSCG00000025651	GFM1	92	35.000	ENSSSCG00000014074	GFM2	91	35.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025651	GFM1	97	92.255	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSSSCG00000025651	GFM1	89	79.641	ENSAPOG00000016489	gfm1	96	79.341	Acanthochromis_polyacanthus
ENSSSCG00000025651	GFM1	98	92.828	ENSAMEG00000013542	GFM1	100	92.715	Ailuropoda_melanoleuca
ENSSSCG00000025651	GFM1	95	76.078	ENSACIG00000014465	gfm1	93	76.078	Amphilophus_citrinellus
ENSSSCG00000025651	GFM1	95	79.944	ENSAOCG00000006023	gfm1	95	79.944	Amphiprion_ocellaris
ENSSSCG00000025651	GFM1	95	79.944	ENSAPEG00000024499	gfm1	99	79.330	Amphiprion_percula
ENSSSCG00000025651	GFM1	100	75.066	ENSATEG00000013789	gfm1	96	79.944	Anabas_testudineus
ENSSSCG00000025651	GFM1	95	83.310	ENSAPLG00000005022	GFM1	99	83.310	Anas_platyrhynchos
ENSSSCG00000025651	GFM1	96	82.806	ENSACAG00000006829	GFM1	98	82.806	Anolis_carolinensis
ENSSSCG00000025651	GFM1	100	90.993	ENSANAG00000035983	GFM1	100	90.993	Aotus_nancymaae
ENSSSCG00000025651	GFM1	95	81.755	ENSACLG00000016586	gfm1	98	80.305	Astatotilapia_calliptera
ENSSSCG00000025651	GFM1	98	78.543	ENSAMXG00000013435	gfm1	98	78.543	Astyanax_mexicanus
ENSSSCG00000025651	GFM1	100	95.358	ENSBTAG00000027795	GFM1	100	95.358	Bos_taurus
ENSSSCG00000025651	GFM1	96	55.571	WBGene00009246	gfm-1	99	55.422	Caenorhabditis_elegans
ENSSSCG00000025651	GFM1	100	91.391	ENSCJAG00000000363	GFM1	100	91.258	Callithrix_jacchus
ENSSSCG00000025651	GFM1	97	93.271	ENSCAFG00000009006	GFM1	100	94.822	Canis_familiaris
ENSSSCG00000025651	GFM1	98	94.181	ENSCAFG00020005878	GFM1	100	93.775	Canis_lupus_dingo
ENSSSCG00000025651	GFM1	100	95.093	ENSCHIG00000015220	GFM1	100	95.093	Capra_hircus
ENSSSCG00000025651	GFM1	100	93.113	ENSTSYG00000002013	GFM1	100	93.113	Carlito_syrichta
ENSSSCG00000025651	GFM1	96	80.441	ENSCAPG00000005699	GFM1	98	80.441	Cavia_aperea
ENSSSCG00000025651	GFM1	100	91.126	ENSCPOG00000001194	GFM1	100	91.126	Cavia_porcellus
ENSSSCG00000025651	GFM1	100	91.126	ENSCCAG00000025561	GFM1	100	91.126	Cebus_capucinus
ENSSSCG00000025651	GFM1	100	91.391	ENSCATG00000037622	GFM1	100	91.391	Cercocebus_atys
ENSSSCG00000025651	GFM1	98	90.811	ENSCLAG00000002503	GFM1	99	90.591	Chinchilla_lanigera
ENSSSCG00000025651	GFM1	100	91.391	ENSCSAG00000012162	GFM1	100	91.391	Chlorocebus_sabaeus
ENSSSCG00000025651	GFM1	100	83.576	ENSCHOG00000004867	GFM1	100	83.576	Choloepus_hoffmanni
ENSSSCG00000025651	GFM1	99	81.586	ENSCPBG00000018367	GFM1	99	82.003	Chrysemys_picta_bellii
ENSSSCG00000025651	GFM1	94	59.336	ENSCING00000011960	-	94	59.336	Ciona_intestinalis
ENSSSCG00000025651	GFM1	95	60.055	ENSCSAVG00000008514	-	99	60.055	Ciona_savignyi
ENSSSCG00000025651	GFM1	97	92.255	ENSCANG00000031714	GFM1	100	91.656	Colobus_angolensis_palliatus
ENSSSCG00000025651	GFM1	100	92.838	ENSCGRG00001022095	GFM1	100	92.838	Cricetulus_griseus_chok1gshd
ENSSSCG00000025651	GFM1	100	92.838	ENSCGRG00000012043	GFM1	100	92.838	Cricetulus_griseus_crigri
ENSSSCG00000025651	GFM1	95	76.184	ENSCSEG00000017088	gfm1	98	76.184	Cynoglossus_semilaevis
ENSSSCG00000025651	GFM1	95	81.667	ENSCVAG00000004126	gfm1	99	80.423	Cyprinodon_variegatus
ENSSSCG00000025651	GFM1	100	77.147	ENSDARG00000063624	gfm1	99	78.639	Danio_rerio
ENSSSCG00000025651	GFM1	54	92.910	ENSDNOG00000016385	-	100	92.910	Dasypus_novemcinctus
ENSSSCG00000025651	GFM1	100	90.993	ENSDORG00000014165	Gfm1	100	90.993	Dipodomys_ordii
ENSSSCG00000025651	GFM1	94	67.278	FBgn0263133	mEFG1	95	67.278	Drosophila_melanogaster
ENSSSCG00000025651	GFM1	98	83.266	ENSETEG00000019197	GFM1	99	83.087	Echinops_telfairi
ENSSSCG00000025651	GFM1	89	67.062	ENSEBUG00000012794	gfm1	99	67.062	Eptatretus_burgeri
ENSSSCG00000025651	GFM1	96	69.793	ENSEEUG00000000429	GFM1	99	69.793	Erinaceus_europaeus
ENSSSCG00000025651	GFM1	100	75.995	ENSELUG00000014728	gfm1	98	77.143	Esox_lucius
ENSSSCG00000025651	GFM1	98	94.858	ENSFCAG00000013291	GFM1	100	94.570	Felis_catus
ENSSSCG00000025651	GFM1	90	83.259	ENSFALG00000007619	GFM1	100	83.259	Ficedula_albicollis
ENSSSCG00000025651	GFM1	100	89.934	ENSFDAG00000016559	GFM1	100	89.934	Fukomys_damarensis
ENSSSCG00000025651	GFM1	95	81.337	ENSFHEG00000006091	gfm1	96	81.337	Fundulus_heteroclitus
ENSSSCG00000025651	GFM1	95	78.532	ENSGMOG00000010161	gfm1	99	78.532	Gadus_morhua
ENSSSCG00000025651	GFM1	98	81.140	ENSGALG00000009634	GFM1	99	81.140	Gallus_gallus
ENSSSCG00000025651	GFM1	95	81.755	ENSGAFG00000012527	gfm1	96	81.755	Gambusia_affinis
ENSSSCG00000025651	GFM1	99	76.689	ENSGACG00000009864	gfm1	97	78.483	Gasterosteus_aculeatus
ENSSSCG00000025651	GFM1	97	92.527	ENSGGOG00000003085	GFM1	100	91.921	Gorilla_gorilla
ENSSSCG00000025651	GFM1	95	81.894	ENSHBUG00000002120	gfm1	96	81.894	Haplochromis_burtoni
ENSSSCG00000025651	GFM1	100	90.861	ENSHGLG00000016855	GFM1	100	90.861	Heterocephalus_glaber_female
ENSSSCG00000025651	GFM1	100	90.861	ENSHGLG00100013049	GFM1	100	90.861	Heterocephalus_glaber_male
ENSSSCG00000025651	GFM1	96	79.092	ENSHCOG00000007638	gfm1	97	80.182	Hippocampus_comes
ENSSSCG00000025651	GFM1	96	80.414	ENSIPUG00000005873	gfm1	97	80.414	Ictalurus_punctatus
ENSSSCG00000025651	GFM1	98	92.005	ENSSTOG00000010150	GFM1	99	92.005	Ictidomys_tridecemlineatus
ENSSSCG00000025651	GFM1	100	91.512	ENSJJAG00000016447	Gfm1	100	91.512	Jaculus_jaculus
ENSSSCG00000025651	GFM1	97	78.261	ENSKMAG00000020768	gfm1	98	78.261	Kryptolebias_marmoratus
ENSSSCG00000025651	GFM1	93	79.886	ENSLBEG00000021315	gfm1	100	79.886	Labrus_bergylta
ENSSSCG00000025651	GFM1	96	80.384	ENSLACG00000012295	GFM1	99	80.384	Latimeria_chalumnae
ENSSSCG00000025651	GFM1	95	75.346	ENSLOCG00000003778	gfm1	99	75.346	Lepisosteus_oculatus
ENSSSCG00000025651	GFM1	97	90.379	ENSLAFG00000010945	GFM1	100	89.241	Loxodonta_africana
ENSSSCG00000025651	GFM1	100	91.656	ENSMFAG00000035731	GFM1	100	91.656	Macaca_fascicularis
ENSSSCG00000025651	GFM1	100	91.788	ENSMMUG00000004961	GFM1	100	91.788	Macaca_mulatta
ENSSSCG00000025651	GFM1	100	91.656	ENSMNEG00000033245	GFM1	100	91.656	Macaca_nemestrina
ENSSSCG00000025651	GFM1	96	90.846	ENSMLEG00000030908	GFM1	99	90.701	Mandrillus_leucophaeus
ENSSSCG00000025651	GFM1	95	80.919	ENSMAMG00000011760	gfm1	96	80.919	Mastacembelus_armatus
ENSSSCG00000025651	GFM1	95	81.894	ENSMZEG00005016639	gfm1	96	81.894	Maylandia_zebra
ENSSSCG00000025651	GFM1	95	82.312	ENSMGAG00000010641	GFM1	96	82.312	Meleagris_gallopavo
ENSSSCG00000025651	GFM1	99	93.691	ENSMAUG00000000611	Gfm1	99	93.801	Mesocricetus_auratus
ENSSSCG00000025651	GFM1	97	93.614	ENSMICG00000049086	GFM1	100	93.245	Microcebus_murinus
ENSSSCG00000025651	GFM1	100	92.706	ENSMOCG00000000465	Gfm1	100	92.706	Microtus_ochrogaster
ENSSSCG00000025651	GFM1	95	79.526	ENSMMOG00000012538	gfm1	97	79.526	Mola_mola
ENSSSCG00000025651	GFM1	98	86.351	ENSMODG00000015673	GFM1	99	86.351	Monodelphis_domestica
ENSSSCG00000025651	GFM1	99	78.360	ENSMALG00000012508	gfm1	98	78.437	Monopterus_albus
ENSSSCG00000025651	GFM1	100	91.512	MGP_CAROLIEiJ_G0025052	Gfm1	100	91.512	Mus_caroli
ENSSSCG00000025651	GFM1	100	91.512	ENSMUSG00000027774	Gfm1	100	91.512	Mus_musculus
ENSSSCG00000025651	GFM1	100	91.645	MGP_PahariEiJ_G0026495	Gfm1	100	91.645	Mus_pahari
ENSSSCG00000025651	GFM1	100	91.512	MGP_SPRETEiJ_G0025994	Gfm1	100	91.512	Mus_spretus
ENSSSCG00000025651	GFM1	100	93.113	ENSMPUG00000002859	GFM1	100	93.113	Mustela_putorius_furo
ENSSSCG00000025651	GFM1	100	94.437	ENSMLUG00000000452	GFM1	100	94.437	Myotis_lucifugus
ENSSSCG00000025651	GFM1	100	90.584	ENSNGAG00000012375	Gfm1	100	90.584	Nannospalax_galili
ENSSSCG00000025651	GFM1	95	81.616	ENSNBRG00000004631	gfm1	98	81.616	Neolamprologus_brichardi
ENSSSCG00000025651	GFM1	97	92.527	ENSNLEG00000004176	GFM1	100	91.921	Nomascus_leucogenys
ENSSSCG00000025651	GFM1	86	90.212	ENSMEUG00000007784	GFM1	92	90.212	Notamacropus_eugenii
ENSSSCG00000025651	GFM1	100	89.934	ENSOPRG00000009860	GFM1	99	91.689	Ochotona_princeps
ENSSSCG00000025651	GFM1	98	91.881	ENSODEG00000004316	GFM1	100	91.258	Octodon_degus
ENSSSCG00000025651	GFM1	95	81.894	ENSONIG00000003772	gfm1	96	81.894	Oreochromis_niloticus
ENSSSCG00000025651	GFM1	98	93.099	ENSOCUG00000013561	GFM1	100	92.715	Oryctolagus_cuniculus
ENSSSCG00000025651	GFM1	94	81.215	ENSORLG00000006487	gfm1	100	81.215	Oryzias_latipes
ENSSSCG00000025651	GFM1	95	81.198	ENSORLG00020003362	gfm1	96	81.198	Oryzias_latipes_hni
ENSSSCG00000025651	GFM1	95	80.780	ENSORLG00015005829	gfm1	96	80.780	Oryzias_latipes_hsok
ENSSSCG00000025651	GFM1	95	81.616	ENSOMEG00000012894	gfm1	96	81.616	Oryzias_melastigma
ENSSSCG00000025651	GFM1	100	93.377	ENSOGAG00000008298	GFM1	100	93.377	Otolemur_garnettii
ENSSSCG00000025651	GFM1	96	94.635	ENSOARG00000002409	GFM1	100	94.635	Ovis_aries
ENSSSCG00000025651	GFM1	97	92.527	ENSPPAG00000033881	GFM1	100	91.921	Pan_paniscus
ENSSSCG00000025651	GFM1	98	94.723	ENSPPRG00000009281	GFM1	100	94.437	Panthera_pardus
ENSSSCG00000025651	GFM1	98	94.587	ENSPTIG00000012416	GFM1	100	94.305	Panthera_tigris_altaica
ENSSSCG00000025651	GFM1	97	92.527	ENSPTRG00000015570	GFM1	100	91.921	Pan_troglodytes
ENSSSCG00000025651	GFM1	100	91.656	ENSPANG00000016512	GFM1	100	91.656	Papio_anubis
ENSSSCG00000025651	GFM1	95	81.450	ENSPKIG00000004876	gfm1	96	81.450	Paramormyrops_kingsleyae
ENSSSCG00000025651	GFM1	99	81.989	ENSPSIG00000012567	GFM1	99	82.409	Pelodiscus_sinensis
ENSSSCG00000025651	GFM1	95	78.750	ENSPMGG00000014068	gfm1	99	78.750	Periophthalmus_magnuspinnatus
ENSSSCG00000025651	GFM1	100	93.236	ENSPEMG00000008942	Gfm1	100	93.236	Peromyscus_maniculatus_bairdii
ENSSSCG00000025651	GFM1	84	85.331	ENSPCIG00000020195	GFM1	98	86.032	Phascolarctos_cinereus
ENSSSCG00000025651	GFM1	95	82.312	ENSPFOG00000011022	gfm1	96	82.312	Poecilia_formosa
ENSSSCG00000025651	GFM1	98	80.597	ENSPLAG00000019585	gfm1	98	80.597	Poecilia_latipinna
ENSSSCG00000025651	GFM1	95	82.173	ENSPMEG00000012376	gfm1	96	82.173	Poecilia_mexicana
ENSSSCG00000025651	GFM1	95	82.033	ENSPREG00000001332	gfm1	91	82.033	Poecilia_reticulata
ENSSSCG00000025651	GFM1	97	92.391	ENSPPYG00000014244	GFM1	100	91.788	Pongo_abelii
ENSSSCG00000025651	GFM1	93	88.620	ENSPCAG00000008934	GFM1	100	88.620	Procavia_capensis
ENSSSCG00000025651	GFM1	97	94.158	ENSPCOG00000022259	GFM1	100	93.775	Propithecus_coquereli
ENSSSCG00000025651	GFM1	100	94.305	ENSPVAG00000013605	GFM1	100	94.305	Pteropus_vampyrus
ENSSSCG00000025651	GFM1	95	81.616	ENSPNYG00000006037	gfm1	99	80.218	Pundamilia_nyererei
ENSSSCG00000025651	GFM1	100	78.117	ENSPNAG00000001237	gfm1	97	80.501	Pygocentrus_nattereri
ENSSSCG00000025651	GFM1	100	91.645	ENSRNOG00000012873	Gfm1	100	91.645	Rattus_norvegicus
ENSSSCG00000025651	GFM1	97	92.120	ENSRBIG00000031363	GFM1	100	91.523	Rhinopithecus_bieti
ENSSSCG00000025651	GFM1	97	92.255	ENSRROG00000031081	GFM1	100	91.656	Rhinopithecus_roxellana
ENSSSCG00000025651	GFM1	92	56.772	YLR069C	-	90	56.772	Saccharomyces_cerevisiae
ENSSSCG00000025651	GFM1	100	92.053	ENSSBOG00000023252	GFM1	100	92.053	Saimiri_boliviensis_boliviensis
ENSSSCG00000025651	GFM1	98	87.045	ENSSHAG00000017772	GFM1	99	87.045	Sarcophilus_harrisii
ENSSSCG00000025651	GFM1	96	81.655	ENSSFOG00015003117	gfm1	99	81.655	Scleropages_formosus
ENSSSCG00000025651	GFM1	99	77.158	ENSSMAG00000013221	gfm1	96	78.830	Scophthalmus_maximus
ENSSSCG00000025651	GFM1	98	78.812	ENSSDUG00000018665	gfm1	96	80.362	Seriola_dumerili
ENSSSCG00000025651	GFM1	98	78.706	ENSSLDG00000020606	gfm1	96	80.362	Seriola_lalandi_dorsalis
ENSSSCG00000025651	GFM1	95	81.198	ENSSPUG00000018686	GFM1	97	81.198	Sphenodon_punctatus
ENSSSCG00000025651	GFM1	95	80.501	ENSSPAG00000008800	gfm1	96	80.501	Stegastes_partitus
ENSSSCG00000025651	GFM1	95	79.387	ENSTRUG00000009244	gfm1	96	79.387	Takifugu_rubripes
ENSSSCG00000025651	GFM1	95	80.919	ENSTNIG00000007729	gfm1	96	80.919	Tetraodon_nigroviridis
ENSSSCG00000025651	GFM1	98	77.463	ENSTBEG00000017404	GFM1	100	77.543	Tupaia_belangeri
ENSSSCG00000025651	GFM1	100	94.188	ENSTTRG00000001735	GFM1	100	94.320	Tursiops_truncatus
ENSSSCG00000025651	GFM1	98	93.911	ENSUAMG00000026381	GFM1	100	93.775	Ursus_americanus
ENSSSCG00000025651	GFM1	98	93.775	ENSUMAG00000011268	GFM1	100	93.642	Ursus_maritimus
ENSSSCG00000025651	GFM1	100	90.981	ENSVPAG00000009444	GFM1	100	90.981	Vicugna_pacos
ENSSSCG00000025651	GFM1	99	92.771	ENSVVUG00000020091	GFM1	100	94.675	Vulpes_vulpes
ENSSSCG00000025651	GFM1	100	81.722	ENSXETG00000032551	GFM1	98	82.950	Xenopus_tropicalis
ENSSSCG00000025651	GFM1	53	79.587	ENSXCOG00000012590	gfm1	89	79.587	Xiphophorus_couchianus
ENSSSCG00000025651	GFM1	95	81.476	ENSXMAG00000000261	gfm1	96	81.476	Xiphophorus_maculatus