EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000025653 (Gene tree)
Gene ID: 100625217
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 51792 bases
Position: chr6:106039898-106091689
Accession: 100625217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000022290	efThoc1	PF11957.8	1.5e-146	1	1
ENSSSCP00000031412	efThoc1	PF11957.8	3.3e-135	1	2
ENSSSCP00000031412	efThoc1	PF11957.8	3.3e-135	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000029403	THOC1-201	6486	XM_021096157	ENSSSCP00000022290	698 (aa)	XP_020951816	I3LE05
ENSSSCT00000041337	THOC1-202	6390	XM_021096158	ENSSSCP00000031412	666 (aa)	XP_020951817	A0A286ZIV5

Gene Model

Click here to download ENSSSCG00000025653's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025653	THOC1	94	98.326	ENSG00000079134	THOC1	100	98.326	Homo_sapiens
ENSSSCG00000025653	THOC1	94	98.938	ENSAMEG00000006645	THOC1	100	98.938	Ailuropoda_melanoleuca
ENSSSCG00000025653	THOC1	91	69.797	ENSACIG00000019392	thoc1	99	69.029	Amphilophus_citrinellus
ENSSSCG00000025653	THOC1	92	73.625	ENSAOCG00000008391	thoc1	99	73.625	Amphiprion_ocellaris
ENSSSCG00000025653	THOC1	98	70.776	ENSAPEG00000001093	thoc1	99	73.466	Amphiprion_percula
ENSSSCG00000025653	THOC1	93	73.272	ENSATEG00000004783	thoc1	99	73.272	Anabas_testudineus
ENSSSCG00000025653	THOC1	93	89.660	ENSAPLG00000016149	THOC1	98	89.660	Anas_platyrhynchos
ENSSSCG00000025653	THOC1	97	87.021	ENSACAG00000008307	THOC1	98	87.405	Anolis_carolinensis
ENSSSCG00000025653	THOC1	94	97.289	ENSANAG00000033200	THOC1	100	97.289	Aotus_nancymaae
ENSSSCG00000025653	THOC1	93	72.699	ENSACLG00000016836	thoc1	99	72.699	Astatotilapia_calliptera
ENSSSCG00000025653	THOC1	87	71.659	ENSAMXG00000014708	thoc1	97	71.659	Astyanax_mexicanus
ENSSSCG00000025653	THOC1	94	98.326	ENSBTAG00000019215	THOC1	100	98.326	Bos_taurus
ENSSSCG00000025653	THOC1	66	35.208	WBGene00020172	thoc-1	69	35.881	Caenorhabditis_elegans
ENSSSCG00000025653	THOC1	94	98.326	ENSCJAG00000020450	THOC1	100	98.326	Callithrix_jacchus
ENSSSCG00000025653	THOC1	94	99.087	ENSCAFG00000018324	THOC1	100	99.087	Canis_familiaris
ENSSSCG00000025653	THOC1	94	99.087	ENSCAFG00020017894	THOC1	100	99.087	Canis_lupus_dingo
ENSSSCG00000025653	THOC1	94	98.326	ENSCHIG00000015399	THOC1	100	98.326	Capra_hircus
ENSSSCG00000025653	THOC1	95	98.636	ENSTSYG00000010585	THOC1	100	98.636	Carlito_syrichta
ENSSSCG00000025653	THOC1	91	77.036	ENSCAPG00000016270	THOC1	98	77.036	Cavia_aperea
ENSSSCG00000025653	THOC1	94	95.890	ENSCPOG00000000959	THOC1	100	95.890	Cavia_porcellus
ENSSSCG00000025653	THOC1	94	98.478	ENSCCAG00000025766	THOC1	100	98.478	Cebus_capucinus
ENSSSCG00000025653	THOC1	94	95.129	ENSCATG00000028180	THOC1	99	96.629	Cercocebus_atys
ENSSSCG00000025653	THOC1	92	97.340	ENSCLAG00000009117	THOC1	100	97.340	Chinchilla_lanigera
ENSSSCG00000025653	THOC1	94	98.630	ENSCSAG00000017631	THOC1	100	98.630	Chlorocebus_sabaeus
ENSSSCG00000025653	THOC1	84	87.050	ENSCHOG00000010609	THOC1	89	87.050	Choloepus_hoffmanni
ENSSSCG00000025653	THOC1	94	93.435	ENSCPBG00000027558	THOC1	99	93.435	Chrysemys_picta_bellii
ENSSSCG00000025653	THOC1	69	48.583	ENSCING00000007663	-	100	48.104	Ciona_intestinalis
ENSSSCG00000025653	THOC1	87	47.861	ENSCSAVG00000010649	-	99	46.975	Ciona_savignyi
ENSSSCG00000025653	THOC1	94	98.478	ENSCANG00000034265	THOC1	100	98.478	Colobus_angolensis_palliatus
ENSSSCG00000025653	THOC1	94	96.657	ENSCGRG00001016464	Thoc1	100	96.657	Cricetulus_griseus_chok1gshd
ENSSSCG00000025653	THOC1	92	96.714	ENSCGRG00000010269	-	100	96.714	Cricetulus_griseus_crigri
ENSSSCG00000025653	THOC1	85	79.561	ENSCGRG00000003390	-	99	79.561	Cricetulus_griseus_crigri
ENSSSCG00000025653	THOC1	93	71.537	ENSCSEG00000012486	thoc1	99	73.151	Cynoglossus_semilaevis
ENSSSCG00000025653	THOC1	93	72.086	ENSCVAG00000020600	thoc1	99	72.086	Cyprinodon_variegatus
ENSSSCG00000025653	THOC1	93	74.962	ENSDARG00000088246	thoc1	99	74.962	Danio_rerio
ENSSSCG00000025653	THOC1	94	98.478	ENSDNOG00000019217	THOC1	100	98.478	Dasypus_novemcinctus
ENSSSCG00000025653	THOC1	94	91.199	ENSDORG00000008060	Thoc1	99	92.958	Dipodomys_ordii
ENSSSCG00000025653	THOC1	91	36.167	FBgn0037382	Hpr1	74	41.133	Drosophila_melanogaster
ENSSSCG00000025653	THOC1	85	76.007	ENSETEG00000004165	THOC1	100	76.007	Echinops_telfairi
ENSSSCG00000025653	THOC1	86	64.784	ENSEBUG00000005998	thoc1	98	66.113	Eptatretus_burgeri
ENSSSCG00000025653	THOC1	98	97.664	ENSEASG00005002549	THOC1	99	97.664	Equus_asinus_asinus
ENSSSCG00000025653	THOC1	99	97.274	ENSECAG00000009267	THOC1	95	97.274	Equus_caballus
ENSSSCG00000025653	THOC1	79	79.500	ENSEEUG00000012214	-	82	79.500	Erinaceus_europaeus
ENSSSCG00000025653	THOC1	94	73.112	ENSELUG00000023277	thoc1	100	73.112	Esox_lucius
ENSSSCG00000025653	THOC1	97	98.667	ENSFCAG00000022454	THOC1	89	98.667	Felis_catus
ENSSSCG00000025653	THOC1	91	91.135	ENSFALG00000006205	THOC1	99	91.135	Ficedula_albicollis
ENSSSCG00000025653	THOC1	93	97.372	ENSFDAG00000006842	THOC1	100	97.372	Fukomys_damarensis
ENSSSCG00000025653	THOC1	93	71.779	ENSFHEG00000008841	thoc1	99	73.256	Fundulus_heteroclitus
ENSSSCG00000025653	THOC1	93	72.519	ENSGMOG00000011486	thoc1	99	72.519	Gadus_morhua
ENSSSCG00000025653	THOC1	95	89.355	ENSGALG00000014915	THOC1	98	90.382	Gallus_gallus
ENSSSCG00000025653	THOC1	93	72.239	ENSGAFG00000021464	thoc1	99	73.256	Gambusia_affinis
ENSSSCG00000025653	THOC1	93	72.409	ENSGACG00000017361	thoc1	99	73.035	Gasterosteus_aculeatus
ENSSSCG00000025653	THOC1	94	93.130	ENSGAGG00000021230	-	98	93.130	Gopherus_agassizii
ENSSSCG00000025653	THOC1	95	98.333	ENSGGOG00000003013	THOC1	100	98.333	Gorilla_gorilla
ENSSSCG00000025653	THOC1	93	72.699	ENSHBUG00000009096	thoc1	99	72.699	Haplochromis_burtoni
ENSSSCG00000025653	THOC1	94	96.651	ENSHGLG00000003712	-	100	96.651	Heterocephalus_glaber_female
ENSSSCG00000025653	THOC1	74	89.637	ENSHGLG00000009264	-	99	89.637	Heterocephalus_glaber_female
ENSSSCG00000025653	THOC1	94	96.956	ENSHGLG00100003570	THOC1	100	96.956	Heterocephalus_glaber_male
ENSSSCG00000025653	THOC1	76	88.083	ENSHGLG00100002225	-	99	88.083	Heterocephalus_glaber_male
ENSSSCG00000025653	THOC1	84	74.194	ENSIPUG00000005306	thoc1	99	74.004	Ictalurus_punctatus
ENSSSCG00000025653	THOC1	94	98.478	ENSSTOG00000006484	THOC1	100	98.478	Ictidomys_tridecemlineatus
ENSSSCG00000025653	THOC1	51	95.294	ENSJJAG00000014893	-	96	95.294	Jaculus_jaculus
ENSSSCG00000025653	THOC1	93	72.146	ENSKMAG00000003904	thoc1	99	72.146	Kryptolebias_marmoratus
ENSSSCG00000025653	THOC1	93	73.323	ENSLBEG00000020372	thoc1	98	73.323	Labrus_bergylta
ENSSSCG00000025653	THOC1	94	80.488	ENSLACG00000014869	THOC1	99	79.542	Latimeria_chalumnae
ENSSSCG00000025653	THOC1	93	77.356	ENSLOCG00000002097	thoc1	99	76.712	Lepisosteus_oculatus
ENSSSCG00000025653	THOC1	94	98.021	ENSLAFG00000009585	THOC1	100	98.021	Loxodonta_africana
ENSSSCG00000025653	THOC1	95	98.636	ENSMFAG00000041520	THOC1	100	98.636	Macaca_fascicularis
ENSSSCG00000025653	THOC1	94	98.630	ENSMMUG00000004662	THOC1	100	98.630	Macaca_mulatta
ENSSSCG00000025653	THOC1	95	98.636	ENSMNEG00000040177	THOC1	100	98.636	Macaca_nemestrina
ENSSSCG00000025653	THOC1	95	98.636	ENSMLEG00000034201	THOC1	100	98.636	Mandrillus_leucophaeus
ENSSSCG00000025653	THOC1	89	73.794	ENSMAMG00000016747	thoc1	99	73.794	Mastacembelus_armatus
ENSSSCG00000025653	THOC1	93	72.699	ENSMZEG00005024609	thoc1	99	72.699	Maylandia_zebra
ENSSSCG00000025653	THOC1	91	90.187	ENSMGAG00000009811	THOC1	100	90.187	Meleagris_gallopavo
ENSSSCG00000025653	THOC1	94	96.657	ENSMAUG00000010272	Thoc1	100	96.657	Mesocricetus_auratus
ENSSSCG00000025653	THOC1	94	99.087	ENSMICG00000027200	THOC1	100	99.087	Microcebus_murinus
ENSSSCG00000025653	THOC1	94	95.427	ENSMOCG00000014536	-	86	95.427	Microtus_ochrogaster
ENSSSCG00000025653	THOC1	94	84.122	ENSMOCG00000014924	-	96	84.122	Microtus_ochrogaster
ENSSSCG00000025653	THOC1	87	73.039	ENSMMOG00000011772	thoc1	100	73.039	Mola_mola
ENSSSCG00000025653	THOC1	94	94.586	ENSMODG00000021482	THOC1	100	94.586	Monodelphis_domestica
ENSSSCG00000025653	THOC1	93	73.425	ENSMALG00000021872	thoc1	99	73.425	Monopterus_albus
ENSSSCG00000025653	THOC1	94	96.956	MGP_CAROLIEiJ_G0021989	Thoc1	100	96.956	Mus_caroli
ENSSSCG00000025653	THOC1	94	97.108	ENSMUSG00000024287	Thoc1	100	97.872	Mus_musculus
ENSSSCG00000025653	THOC1	94	97.108	MGP_PahariEiJ_G0018726	Thoc1	100	97.108	Mus_pahari
ENSSSCG00000025653	THOC1	94	96.956	MGP_SPRETEiJ_G0022905	Thoc1	100	96.956	Mus_spretus
ENSSSCG00000025653	THOC1	94	98.782	ENSMPUG00000005448	THOC1	100	98.782	Mustela_putorius_furo
ENSSSCG00000025653	THOC1	94	98.024	ENSMLUG00000004090	-	100	98.024	Myotis_lucifugus
ENSSSCG00000025653	THOC1	85	85.260	ENSMLUG00000027965	-	99	85.210	Myotis_lucifugus
ENSSSCG00000025653	THOC1	60	84.887	ENSMLUG00000024912	-	100	84.887	Myotis_lucifugus
ENSSSCG00000025653	THOC1	94	98.174	ENSNGAG00000001401	-	100	98.174	Nannospalax_galili
ENSSSCG00000025653	THOC1	94	75.994	ENSNGAG00000008061	-	99	76.662	Nannospalax_galili
ENSSSCG00000025653	THOC1	91	72.770	ENSNBRG00000005991	thoc1	98	72.770	Neolamprologus_brichardi
ENSSSCG00000025653	THOC1	94	98.630	ENSNLEG00000006835	THOC1	100	98.630	Nomascus_leucogenys
ENSSSCG00000025653	THOC1	91	82.473	ENSMEUG00000009756	THOC1	99	82.473	Notamacropus_eugenii
ENSSSCG00000025653	THOC1	94	78.234	ENSOPRG00000001108	THOC1	100	78.234	Ochotona_princeps
ENSSSCG00000025653	THOC1	94	91.020	ENSODEG00000006623	THOC1	100	91.020	Octodon_degus
ENSSSCG00000025653	THOC1	94	72.289	ENSONIG00000009440	thoc1	100	72.289	Oreochromis_niloticus
ENSSSCG00000025653	THOC1	94	98.630	ENSOCUG00000011601	THOC1	100	98.630	Oryctolagus_cuniculus
ENSSSCG00000025653	THOC1	93	72.239	ENSORLG00000017629	thoc1	99	72.239	Oryzias_latipes
ENSSSCG00000025653	THOC1	93	72.239	ENSORLG00020007567	thoc1	99	72.239	Oryzias_latipes_hni
ENSSSCG00000025653	THOC1	93	72.393	ENSORLG00015007356	thoc1	99	72.393	Oryzias_latipes_hsok
ENSSSCG00000025653	THOC1	93	70.859	ENSOMEG00000008200	thoc1	99	71.626	Oryzias_melastigma
ENSSSCG00000025653	THOC1	94	95.448	ENSOGAG00000000470	THOC1	100	95.448	Otolemur_garnettii
ENSSSCG00000025653	THOC1	94	96.646	ENSOARG00000009238	THOC1	99	96.646	Ovis_aries
ENSSSCG00000025653	THOC1	95	98.333	ENSPPAG00000031812	THOC1	100	98.333	Pan_paniscus
ENSSSCG00000025653	THOC1	94	98.630	ENSPPRG00000023794	THOC1	100	98.630	Panthera_pardus
ENSSSCG00000025653	THOC1	94	98.630	ENSPTIG00000007469	THOC1	100	98.630	Panthera_tigris_altaica
ENSSSCG00000025653	THOC1	94	97.440	ENSPTRG00000009816	THOC1	100	97.440	Pan_troglodytes
ENSSSCG00000025653	THOC1	94	97.579	ENSPANG00000008665	THOC1	100	97.579	Papio_anubis
ENSSSCG00000025653	THOC1	93	72.783	ENSPKIG00000005906	thoc1	99	73.547	Paramormyrops_kingsleyae
ENSSSCG00000025653	THOC1	76	94.371	ENSPSIG00000007691	THOC1	98	94.371	Pelodiscus_sinensis
ENSSSCG00000025653	THOC1	88	73.582	ENSPMGG00000008279	thoc1	95	73.582	Periophthalmus_magnuspinnatus
ENSSSCG00000025653	THOC1	94	97.108	ENSPEMG00000021789	Thoc1	100	97.108	Peromyscus_maniculatus_bairdii
ENSSSCG00000025653	THOC1	70	94.534	ENSPCIG00000026942	THOC1	98	96.044	Phascolarctos_cinereus
ENSSSCG00000025653	THOC1	93	72.504	ENSPFOG00000011673	thoc1	99	72.504	Poecilia_formosa
ENSSSCG00000025653	THOC1	93	72.393	ENSPLAG00000019648	thoc1	99	72.393	Poecilia_latipinna
ENSSSCG00000025653	THOC1	93	72.504	ENSPMEG00000007083	thoc1	99	72.504	Poecilia_mexicana
ENSSSCG00000025653	THOC1	93	72.239	ENSPREG00000006719	thoc1	99	72.239	Poecilia_reticulata
ENSSSCG00000025653	THOC1	70	98.563	ENSPPYG00000009049	-	99	98.563	Pongo_abelii
ENSSSCG00000025653	THOC1	94	88.128	ENSPCAG00000005320	THOC1	100	88.128	Procavia_capensis
ENSSSCG00000025653	THOC1	94	98.478	ENSPCOG00000009234	THOC1	100	98.478	Propithecus_coquereli
ENSSSCG00000025653	THOC1	94	96.651	ENSPVAG00000004007	THOC1	100	96.651	Pteropus_vampyrus
ENSSSCG00000025653	THOC1	93	72.699	ENSPNYG00000019152	thoc1	99	72.699	Pundamilia_nyererei
ENSSSCG00000025653	THOC1	93	74.615	ENSPNAG00000023390	thoc1	99	74.615	Pygocentrus_nattereri
ENSSSCG00000025653	THOC1	86	86.719	ENSRNOG00000015332	Thoc1	100	86.719	Rattus_norvegicus
ENSSSCG00000025653	THOC1	94	97.590	ENSRBIG00000033738	THOC1	99	98.609	Rhinopithecus_bieti
ENSSSCG00000025653	THOC1	94	98.630	ENSRROG00000044988	THOC1	100	98.630	Rhinopithecus_roxellana
ENSSSCG00000025653	THOC1	95	98.333	ENSSBOG00000016556	THOC1	100	98.333	Saimiri_boliviensis_boliviensis
ENSSSCG00000025653	THOC1	94	95.441	ENSSHAG00000014829	THOC1	100	95.441	Sarcophilus_harrisii
ENSSSCG00000025653	THOC1	93	75.153	ENSSFOG00015021527	thoc1	99	75.153	Scleropages_formosus
ENSSSCG00000025653	THOC1	93	71.145	ENSSMAG00000018465	thoc1	99	71.145	Scophthalmus_maximus
ENSSSCG00000025653	THOC1	93	73.733	ENSSDUG00000016810	thoc1	99	73.733	Seriola_dumerili
ENSSSCG00000025653	THOC1	93	73.425	ENSSLDG00000015555	thoc1	99	73.425	Seriola_lalandi_dorsalis
ENSSSCG00000025653	THOC1	83	97.701	ENSSARG00000006910	THOC1	88	97.701	Sorex_araneus
ENSSSCG00000025653	THOC1	92	90.528	ENSSPUG00000007238	THOC1	99	90.534	Sphenodon_punctatus
ENSSSCG00000025653	THOC1	93	70.365	ENSSPAG00000018847	thoc1	99	70.365	Stegastes_partitus
ENSSSCG00000025653	THOC1	94	91.450	ENSTGUG00000010204	THOC1	99	91.450	Taeniopygia_guttata
ENSSSCG00000025653	THOC1	93	72.239	ENSTRUG00000013518	thoc1	99	72.239	Takifugu_rubripes
ENSSSCG00000025653	THOC1	93	72.409	ENSTNIG00000008473	thoc1	99	72.409	Tetraodon_nigroviridis
ENSSSCG00000025653	THOC1	94	91.020	ENSTBEG00000016920	THOC1	100	91.020	Tupaia_belangeri
ENSSSCG00000025653	THOC1	94	92.085	ENSTTRG00000016664	THOC1	100	92.085	Tursiops_truncatus
ENSSSCG00000025653	THOC1	94	98.782	ENSUAMG00000002527	THOC1	100	98.782	Ursus_americanus
ENSSSCG00000025653	THOC1	94	98.782	ENSUMAG00000019693	THOC1	100	98.782	Ursus_maritimus
ENSSSCG00000025653	THOC1	76	97.500	ENSVPAG00000003726	-	77	97.500	Vicugna_pacos
ENSSSCG00000025653	THOC1	94	99.087	ENSVVUG00000004384	THOC1	100	99.087	Vulpes_vulpes
ENSSSCG00000025653	THOC1	94	79.545	ENSXETG00000003155	thoc1	98	79.545	Xenopus_tropicalis
ENSSSCG00000025653	THOC1	86	74.611	ENSXCOG00000016085	thoc1	89	74.611	Xiphophorus_couchianus
ENSSSCG00000025653	THOC1	93	72.239	ENSXMAG00000002353	thoc1	99	72.239	Xiphophorus_maculatus