EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000025672 (Gene tree)
Gene ID: 100623447
Gene Symbol: -
Alias: FLJ10770|KIAA1579
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 155248 bases
Position: chr6:147567182-147722429
Accession: 100623447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000020231	RRM_1	PF00076.22	9.5e-30	1	3
ENSSSCP00000020231	RRM_1	PF00076.22	9.5e-30	2	3
ENSSSCP00000020231	RRM_1	PF00076.22	9.5e-30	3	3
ENSSSCP00000043606	RRM_1	PF00076.22	1.1e-29	1	3
ENSSSCP00000043606	RRM_1	PF00076.22	1.1e-29	2	3
ENSSSCP00000043606	RRM_1	PF00076.22	1.1e-29	3	3
ENSSSCP00000059468	RRM_1	PF00076.22	1.1e-29	1	3
ENSSSCP00000059468	RRM_1	PF00076.22	1.1e-29	2	3
ENSSSCP00000059468	RRM_1	PF00076.22	1.1e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000050562	-	4405	XM_021096539	ENSSSCP00000043606	687 (aa)	XP_020952198	A0A287AHY5
ENSSSCT00000022489	-	2143	-	ENSSSCP00000020231	640 (aa)	-	I3L873
ENSSSCT00000042459	-	4405	-	ENSSSCP00000059468	687 (aa)	-	A0A287AHY5

Gene Model

Click here to download ENSSSCG00000025672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000025672	-	88	44.948	ENSSSCG00000013650	-	72	45.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025672	-	95	88.788	ENSG00000162437	RAVER2	95	88.754	Homo_sapiens
ENSSSCG00000025672	-	85	50.542	ENSAPOG00000002766	raver2	63	51.264	Acanthochromis_polyacanthus
ENSSSCG00000025672	-	91	91.892	ENSAMEG00000015178	RAVER2	100	91.892	Ailuropoda_melanoleuca
ENSSSCG00000025672	-	85	48.951	ENSATEG00000019679	raver2	75	65.899	Anabas_testudineus
ENSSSCG00000025672	-	88	64.715	ENSAPLG00000013160	RAVER2	100	64.715	Anas_platyrhynchos
ENSSSCG00000025672	-	93	64.559	ENSACAG00000008443	RAVER2	89	64.511	Anolis_carolinensis
ENSSSCG00000025672	-	93	89.181	ENSANAG00000025857	RAVER2	95	89.181	Aotus_nancymaae
ENSSSCG00000025672	-	85	48.021	ENSACLG00000001840	raver2	65	48.542	Astatotilapia_calliptera
ENSSSCG00000025672	-	88	53.425	ENSAMXG00000010570	raver2	68	53.425	Astyanax_mexicanus
ENSSSCG00000025672	-	96	91.088	ENSBTAG00000030686	RAVER2	96	91.324	Bos_taurus
ENSSSCG00000025672	-	95	85.866	ENSCJAG00000016724	RAVER2	95	85.866	Callithrix_jacchus
ENSSSCG00000025672	-	82	91.197	ENSCAFG00000018617	RAVER2	99	91.197	Canis_familiaris
ENSSSCG00000025672	-	95	90.979	ENSCAFG00020018120	RAVER2	94	90.979	Canis_lupus_dingo
ENSSSCG00000025672	-	95	91.006	ENSCHIG00000005514	RAVER2	96	91.006	Capra_hircus
ENSSSCG00000025672	-	88	88.468	ENSTSYG00000006019	RAVER2	88	88.468	Carlito_syrichta
ENSSSCG00000025672	-	88	58.033	ENSCAPG00000013527	RAVER2	99	66.667	Cavia_aperea
ENSSSCG00000025672	-	91	62.656	ENSCPOG00000005986	RAVER2	99	62.656	Cavia_porcellus
ENSSSCG00000025672	-	95	87.557	ENSCCAG00000029834	RAVER2	95	87.557	Cebus_capucinus
ENSSSCG00000025672	-	95	87.690	ENSCATG00000040658	RAVER2	100	87.842	Cercocebus_atys
ENSSSCG00000025672	-	88	65.512	ENSCLAG00000006590	RAVER2	100	65.512	Chinchilla_lanigera
ENSSSCG00000025672	-	91	88.273	ENSCSAG00000001350	RAVER2	100	88.273	Chlorocebus_sabaeus
ENSSSCG00000025672	-	95	86.149	ENSCHOG00000007668	RAVER2	95	86.149	Choloepus_hoffmanni
ENSSSCG00000025672	-	97	67.143	ENSCPBG00000001015	RAVER2	86	68.709	Chrysemys_picta_bellii
ENSSSCG00000025672	-	93	87.461	ENSCANG00000042311	RAVER2	100	87.461	Colobus_angolensis_palliatus
ENSSSCG00000025672	-	96	79.211	ENSCGRG00001011852	Raver2	95	80.781	Cricetulus_griseus_chok1gshd
ENSSSCG00000025672	-	59	58.311	ENSCVAG00000002687	raver2	85	58.311	Cyprinodon_variegatus
ENSSSCG00000025672	-	84	54.496	ENSDARG00000075034	raver2	64	54.433	Danio_rerio
ENSSSCG00000025672	-	95	89.498	ENSDNOG00000012130	RAVER2	96	89.498	Dasypus_novemcinctus
ENSSSCG00000025672	-	95	80.882	ENSDORG00000002498	Raver2	90	81.040	Dipodomys_ordii
ENSSSCG00000025672	-	96	67.258	ENSETEG00000000706	RAVER2	97	67.763	Echinops_telfairi
ENSSSCG00000025672	-	91	85.238	ENSEASG00005008158	RAVER2	100	85.238	Equus_asinus_asinus
ENSSSCG00000025672	-	91	85.556	ENSECAG00000022014	RAVER2	100	85.556	Equus_caballus
ENSSSCG00000025672	-	78	48.055	ENSELUG00000022384	raver2	84	67.281	Esox_lucius
ENSSSCG00000025672	-	94	90.951	ENSFCAG00000022781	RAVER2	96	90.259	Felis_catus
ENSSSCG00000025672	-	87	61.071	ENSFALG00000012634	RAVER2	100	59.802	Ficedula_albicollis
ENSSSCG00000025672	-	91	63.810	ENSFDAG00000010721	RAVER2	100	63.810	Fukomys_damarensis
ENSSSCG00000025672	-	85	48.793	ENSFHEG00000001322	raver2	65	49.826	Fundulus_heteroclitus
ENSSSCG00000025672	-	70	67.442	ENSGMOG00000013535	raver2	75	67.442	Gadus_morhua
ENSSSCG00000025672	-	93	65.736	ENSGALG00000033759	RAVER2	85	65.596	Gallus_gallus
ENSSSCG00000025672	-	90	43.777	ENSGAFG00000008577	raver2	76	44.690	Gambusia_affinis
ENSSSCG00000025672	-	85	50.457	ENSGACG00000007122	raver2	89	50.457	Gasterosteus_aculeatus
ENSSSCG00000025672	-	91	67.797	ENSGAGG00000018767	RAVER2	94	64.968	Gopherus_agassizii
ENSSSCG00000025672	-	95	84.697	ENSGGOG00000016447	RAVER2	99	84.650	Gorilla_gorilla
ENSSSCG00000025672	-	85	48.116	ENSHBUG00000022983	raver2	76	44.510	Haplochromis_burtoni
ENSSSCG00000025672	-	93	66.460	ENSHGLG00000018409	RAVER2	98	66.308	Heterocephalus_glaber_female
ENSSSCG00000025672	-	87	66.225	ENSHGLG00100006640	RAVER2	99	69.531	Heterocephalus_glaber_male
ENSSSCG00000025672	-	84	48.754	ENSHCOG00000005933	raver2	65	48.772	Hippocampus_comes
ENSSSCG00000025672	-	88	52.007	ENSIPUG00000007082	raver2	80	52.189	Ictalurus_punctatus
ENSSSCG00000025672	-	66	82.783	ENSSTOG00000009844	RAVER2	99	82.783	Ictidomys_tridecemlineatus
ENSSSCG00000025672	-	93	79.427	ENSJJAG00000000374	Raver2	98	79.375	Jaculus_jaculus
ENSSSCG00000025672	-	85	49.914	ENSLACG00000005188	RAVER2	75	49.914	Latimeria_chalumnae
ENSSSCG00000025672	-	91	52.261	ENSLOCG00000006773	raver2	75	50.390	Lepisosteus_oculatus
ENSSSCG00000025672	-	88	90.563	ENSLAFG00000012508	RAVER2	100	90.563	Loxodonta_africana
ENSSSCG00000025672	-	92	90.156	ENSMFAG00000031436	RAVER2	94	89.969	Macaca_fascicularis
ENSSSCG00000025672	-	92	90.000	ENSMMUG00000018565	RAVER2	100	87.500	Macaca_mulatta
ENSSSCG00000025672	-	95	89.210	ENSMNEG00000033127	RAVER2	100	87.671	Macaca_nemestrina
ENSSSCG00000025672	-	88	87.829	ENSMLEG00000036310	RAVER2	100	87.829	Mandrillus_leucophaeus
ENSSSCG00000025672	-	59	58.047	ENSMAMG00000009059	raver2	80	58.047	Mastacembelus_armatus
ENSSSCG00000025672	-	85	48.193	ENSMZEG00005014386	raver2	65	48.714	Maylandia_zebra
ENSSSCG00000025672	-	88	66.775	ENSMGAG00000011806	RAVER2	100	66.775	Meleagris_gallopavo
ENSSSCG00000025672	-	96	78.604	ENSMAUG00000004248	Raver2	95	80.156	Mesocricetus_auratus
ENSSSCG00000025672	-	96	90.563	ENSMICG00000029259	RAVER2	95	90.965	Microcebus_murinus
ENSSSCG00000025672	-	96	77.341	ENSMOCG00000018087	Raver2	95	78.694	Microtus_ochrogaster
ENSSSCG00000025672	-	93	70.570	ENSMODG00000001242	RAVER2	92	70.570	Monodelphis_domestica
ENSSSCG00000025672	-	85	49.239	ENSMALG00000018093	raver2	70	48.214	Monopterus_albus
ENSSSCG00000025672	-	100	76.734	MGP_CAROLIEiJ_G0026202	Raver2	92	84.434	Mus_caroli
ENSSSCG00000025672	-	100	76.879	ENSMUSG00000035275	Raver2	92	84.670	Mus_musculus
ENSSSCG00000025672	-	93	80.912	MGP_PahariEiJ_G0028539	Raver2	92	84.670	Mus_pahari
ENSSSCG00000025672	-	100	76.879	MGP_SPRETEiJ_G0027171	Raver2	92	84.670	Mus_spretus
ENSSSCG00000025672	-	91	90.000	ENSMPUG00000000717	RAVER2	100	90.000	Mustela_putorius_furo
ENSSSCG00000025672	-	87	90.357	ENSMLUG00000007699	RAVER2	100	90.357	Myotis_lucifugus
ENSSSCG00000025672	-	98	77.266	ENSNGAG00000000905	Raver2	97	78.254	Nannospalax_galili
ENSSSCG00000025672	-	89	87.844	ENSNLEG00000015145	RAVER2	100	87.844	Nomascus_leucogenys
ENSSSCG00000025672	-	80	69.855	ENSMEUG00000012740	RAVER2	83	68.347	Notamacropus_eugenii
ENSSSCG00000025672	-	68	76.056	ENSOPRG00000016988	-	68	76.056	Ochotona_princeps
ENSSSCG00000025672	-	92	66.455	ENSODEG00000005253	RAVER2	100	66.455	Octodon_degus
ENSSSCG00000025672	-	87	68.617	ENSOANG00000008327	-	100	67.374	Ornithorhynchus_anatinus
ENSSSCG00000025672	-	95	79.148	ENSOCUG00000006221	RAVER2	95	79.179	Oryctolagus_cuniculus
ENSSSCG00000025672	-	85	50.526	ENSORLG00000010073	raver2	66	50.702	Oryzias_latipes
ENSSSCG00000025672	-	85	50.611	ENSORLG00020010822	raver2	64	50.613	Oryzias_latipes_hni
ENSSSCG00000025672	-	53	61.834	ENSORLG00015000191	raver2	82	63.636	Oryzias_latipes_hsok
ENSSSCG00000025672	-	85	50.175	ENSOMEG00000007789	raver2	64	50.438	Oryzias_melastigma
ENSSSCG00000025672	-	88	81.773	ENSOGAG00000011157	RAVER2	100	81.773	Otolemur_garnettii
ENSSSCG00000025672	-	95	90.701	ENSOARG00000010030	RAVER2	96	90.701	Ovis_aries
ENSSSCG00000025672	-	95	88.906	ENSPPAG00000039189	RAVER2	99	88.906	Pan_paniscus
ENSSSCG00000025672	-	94	90.798	ENSPPRG00000023350	RAVER2	96	90.107	Panthera_pardus
ENSSSCG00000025672	-	88	91.269	ENSPTIG00000009389	RAVER2	88	91.269	Panthera_tigris_altaica
ENSSSCG00000025672	-	95	87.424	ENSPTRG00000000824	RAVER2	95	87.386	Pan_troglodytes
ENSSSCG00000025672	-	96	88.060	ENSPANG00000003396	RAVER2	95	88.138	Papio_anubis
ENSSSCG00000025672	-	88	48.962	ENSPKIG00000019357	raver2	68	50.172	Paramormyrops_kingsleyae
ENSSSCG00000025672	-	80	57.831	ENSPSIG00000010074	RAVER2	84	58.076	Pelodiscus_sinensis
ENSSSCG00000025672	-	57	50.820	ENSPMGG00000017781	raver2	84	50.820	Periophthalmus_magnuspinnatus
ENSSSCG00000025672	-	96	79.394	ENSPEMG00000001332	Raver2	95	80.967	Peromyscus_maniculatus_bairdii
ENSSSCG00000025672	-	92	72.430	ENSPCIG00000020336	RAVER2	95	71.299	Phascolarctos_cinereus
ENSSSCG00000025672	-	85	48.116	ENSPFOG00000009386	raver2	64	48.966	Poecilia_formosa
ENSSSCG00000025672	-	85	48.288	ENSPLAG00000005632	raver2	65	48.877	Poecilia_latipinna
ENSSSCG00000025672	-	85	48.116	ENSPMEG00000000509	raver2	65	48.705	Poecilia_mexicana
ENSSSCG00000025672	-	85	48.116	ENSPREG00000020514	raver2	65	49.565	Poecilia_reticulata
ENSSSCG00000025672	-	56	93.750	ENSPPYG00000001271	-	92	93.750	Pongo_abelii
ENSSSCG00000025672	-	69	88.550	ENSPCAG00000000017	RAVER2	68	88.550	Procavia_capensis
ENSSSCG00000025672	-	96	87.856	ENSPCOG00000028379	RAVER2	95	88.280	Propithecus_coquereli
ENSSSCG00000025672	-	88	89.456	ENSPVAG00000007172	RAVER2	100	89.456	Pteropus_vampyrus
ENSSSCG00000025672	-	63	46.948	ENSPNAG00000000962	raver2	70	69.124	Pygocentrus_nattereri
ENSSSCG00000025672	-	93	80.438	ENSRNOG00000023812	Raver2	95	80.156	Rattus_norvegicus
ENSSSCG00000025672	-	97	83.584	ENSRBIG00000044090	RAVER2	98	84.098	Rhinopithecus_bieti
ENSSSCG00000025672	-	90	90.177	ENSRROG00000041867	RAVER2	90	90.177	Rhinopithecus_roxellana
ENSSSCG00000025672	-	90	87.400	ENSSBOG00000023706	RAVER2	100	87.400	Saimiri_boliviensis_boliviensis
ENSSSCG00000025672	-	88	73.008	ENSSHAG00000014568	RAVER2	100	73.008	Sarcophilus_harrisii
ENSSSCG00000025672	-	80	51.060	ENSSFOG00015013015	raver2	70	51.060	Scleropages_formosus
ENSSSCG00000025672	-	89	47.438	ENSSMAG00000020654	raver2	68	47.697	Scophthalmus_maximus
ENSSSCG00000025672	-	85	49.742	ENSSDUG00000013065	raver2	69	48.445	Seriola_dumerili
ENSSSCG00000025672	-	85	49.570	ENSSLDG00000002746	raver2	71	48.282	Seriola_lalandi_dorsalis
ENSSSCG00000025672	-	93	69.179	ENSSPUG00000016441	RAVER2	96	68.478	Sphenodon_punctatus
ENSSSCG00000025672	-	59	58.158	ENSSPAG00000004134	raver2	86	58.158	Stegastes_partitus
ENSSSCG00000025672	-	87	62.567	ENSTGUG00000009973	RAVER2	100	62.567	Taeniopygia_guttata
ENSSSCG00000025672	-	64	77.419	ENSTRUG00000018541	raver2	69	77.419	Takifugu_rubripes
ENSSSCG00000025672	-	63	76.667	ENSTNIG00000018106	raver2	92	49.174	Tetraodon_nigroviridis
ENSSSCG00000025672	-	88	79.242	ENSTBEG00000009004	RAVER2	100	79.242	Tupaia_belangeri
ENSSSCG00000025672	-	84	90.968	ENSTTRG00000009692	RAVER2	83	93.706	Tursiops_truncatus
ENSSSCG00000025672	-	87	88.592	ENSUAMG00000007847	RAVER2	84	88.434	Ursus_americanus
ENSSSCG00000025672	-	88	88.651	ENSUMAG00000008489	RAVER2	93	88.651	Ursus_maritimus
ENSSSCG00000025672	-	91	91.270	ENSVVUG00000013993	RAVER2	100	91.270	Vulpes_vulpes
ENSSSCG00000025672	-	85	52.930	ENSXETG00000020406	raver2	86	51.020	Xenopus_tropicalis
ENSSSCG00000025672	-	85	47.603	ENSXMAG00000002206	raver2	68	48.124	Xiphophorus_maculatus