EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000025942 (Gene tree)
Gene ID: 100624482
Gene Symbol: MCCC1
Alias: MCCA
Full Name: methylcrotonoyl-CoA carboxylase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 87199 bases
Position: chr13:120983220-121070418
Accession: 100624482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027334	RimK	PF08443.11	1.2e-05	1	1
ENSSSCP00000040122	RimK	PF08443.11	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051084	MCCC1-202	2088	XM_021069887	ENSSSCP00000040122	695 (aa)	XP_020925546	A0A287A8I4
ENSSSCT00000029315	MCCC1-201	2571	XM_021069889	ENSSSCP00000027334	590 (aa)	XP_020925548	I3LT90

Gene Model

Click here to download ENSSSCG00000025942's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00280	Valine, leucine and isoleucine degradation	KEGG
ssc01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000025942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000025942	MCCC1	98	36.634	ENSSSCG00000009522	PCCA	91	39.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000025942	MCCC1	100	86.949	ENSG00000078070	MCCC1	98	90.845	Homo_sapiens
ENSSSCG00000025942	MCCC1	99	87.436	ENSAMEG00000015967	MCCC1	100	83.586	Ailuropoda_melanoleuca
ENSSSCG00000025942	MCCC1	93	68.431	ENSACIG00000023146	mccc1	96	79.765	Amphilophus_citrinellus
ENSSSCG00000025942	MCCC1	99	78.061	ENSAPLG00000008989	MCCC1	97	74.892	Anas_platyrhynchos
ENSSSCG00000025942	MCCC1	100	85.593	ENSANAG00000028235	MCCC1	99	89.277	Aotus_nancymaae
ENSSSCG00000025942	MCCC1	97	72.300	ENSACLG00000026110	mccc1	99	68.981	Astatotilapia_calliptera
ENSSSCG00000025942	MCCC1	97	73.043	ENSAMXG00000001531	mccc1	97	68.940	Astyanax_mexicanus
ENSSSCG00000025942	MCCC1	99	89.438	ENSBTAG00000006548	MCCC1	99	88.252	Bos_taurus
ENSSSCG00000025942	MCCC1	100	80.000	ENSCJAG00000005103	MCCC1	99	89.510	Callithrix_jacchus
ENSSSCG00000025942	MCCC1	100	88.305	ENSCAFG00000011749	MCCC1	100	83.586	Canis_familiaris
ENSSSCG00000025942	MCCC1	100	88.305	ENSCAFG00020001000	MCCC1	100	83.586	Canis_lupus_dingo
ENSSSCG00000025942	MCCC1	99	89.438	ENSCHIG00000025794	MCCC1	99	85.613	Capra_hircus
ENSSSCG00000025942	MCCC1	100	87.119	ENSTSYG00000012606	MCCC1	99	90.443	Carlito_syrichta
ENSSSCG00000025942	MCCC1	99	78.188	ENSCAPG00000012269	MCCC1	99	75.727	Cavia_aperea
ENSSSCG00000025942	MCCC1	99	79.966	ENSCPOG00000010866	MCCC1	100	76.138	Cavia_porcellus
ENSSSCG00000025942	MCCC1	100	87.797	ENSCATG00000037699	MCCC1	99	91.841	Cercocebus_atys
ENSSSCG00000025942	MCCC1	98	79.896	ENSCLAG00000014174	MCCC1	98	79.188	Chinchilla_lanigera
ENSSSCG00000025942	MCCC1	100	88.305	ENSCSAG00000013226	MCCC1	100	84.138	Chlorocebus_sabaeus
ENSSSCG00000025942	MCCC1	98	78.830	ENSCPBG00000000534	MCCC1	99	76.720	Chrysemys_picta_bellii
ENSSSCG00000025942	MCCC1	95	56.522	ENSCING00000020099	-	99	54.026	Ciona_intestinalis
ENSSSCG00000025942	MCCC1	95	56.696	ENSCING00000019260	-	90	55.505	Ciona_intestinalis
ENSSSCG00000025942	MCCC1	98	51.993	ENSCSAVG00000007062	-	99	51.545	Ciona_savignyi
ENSSSCG00000025942	MCCC1	100	87.119	ENSCANG00000037917	MCCC1	98	92.225	Colobus_angolensis_palliatus
ENSSSCG00000025942	MCCC1	98	85.442	ENSCGRG00001012469	Mccc1	99	81.206	Cricetulus_griseus_chok1gshd
ENSSSCG00000025942	MCCC1	98	85.442	ENSCGRG00000002616	Mccc1	99	81.047	Cricetulus_griseus_crigri
ENSSSCG00000025942	MCCC1	98	72.021	ENSCSEG00000019501	mccc1	98	66.479	Cynoglossus_semilaevis
ENSSSCG00000025942	MCCC1	98	73.575	ENSDARG00000102538	mccc1	96	70.322	Danio_rerio
ENSSSCG00000025942	MCCC1	99	87.669	ENSDNOG00000012070	MCCC1	100	83.379	Dasypus_novemcinctus
ENSSSCG00000025942	MCCC1	99	85.920	ENSDORG00000000473	Mccc1	99	85.920	Dipodomys_ordii
ENSSSCG00000025942	MCCC1	99	84.786	ENSETEG00000008384	MCCC1	99	74.757	Echinops_telfairi
ENSSSCG00000025942	MCCC1	55	75.196	ENSEBUG00000016250	-	90	75.196	Eptatretus_burgeri
ENSSSCG00000025942	MCCC1	100	88.475	ENSEASG00005015339	MCCC1	100	91.906	Equus_asinus_asinus
ENSSSCG00000025942	MCCC1	100	88.136	ENSECAG00000008214	MCCC1	100	83.586	Equus_caballus
ENSSSCG00000025942	MCCC1	98	75.217	ENSEEUG00000011233	MCCC1	99	67.435	Erinaceus_europaeus
ENSSSCG00000025942	MCCC1	97	73.252	ENSELUG00000010299	mccc1	98	71.001	Esox_lucius
ENSSSCG00000025942	MCCC1	100	89.153	ENSFCAG00000000940	MCCC1	97	92.417	Felis_catus
ENSSSCG00000025942	MCCC1	99	78.840	ENSFALG00000008252	MCCC1	97	74.784	Ficedula_albicollis
ENSSSCG00000025942	MCCC1	98	77.123	ENSFDAG00000009183	MCCC1	100	74.100	Fukomys_damarensis
ENSSSCG00000025942	MCCC1	97	70.455	ENSGMOG00000008521	mccc1	99	65.755	Gadus_morhua
ENSSSCG00000025942	MCCC1	99	78.157	ENSGALG00000008785	MCCC1	91	74.855	Gallus_gallus
ENSSSCG00000025942	MCCC1	98	72.396	ENSGAFG00000010643	mccc1	98	67.297	Gambusia_affinis
ENSSSCG00000025942	MCCC1	98	79.002	ENSGAGG00000000770	MCCC1	99	76.417	Gopherus_agassizii
ENSSSCG00000025942	MCCC1	100	87.119	ENSGGOG00000002784	MCCC1	98	91.549	Gorilla_gorilla
ENSSSCG00000025942	MCCC1	97	72.125	ENSHBUG00000000956	mccc1	99	66.338	Haplochromis_burtoni
ENSSSCG00000025942	MCCC1	100	82.542	ENSHGLG00000014650	MCCC1	99	79.391	Heterocephalus_glaber_female
ENSSSCG00000025942	MCCC1	100	82.712	ENSHGLG00100015295	MCCC1	99	79.391	Heterocephalus_glaber_male
ENSSSCG00000025942	MCCC1	98	70.660	ENSHCOG00000010503	mccc1	99	67.552	Hippocampus_comes
ENSSSCG00000025942	MCCC1	98	73.264	ENSIPUG00000024615	mccc1	96	69.737	Ictalurus_punctatus
ENSSSCG00000025942	MCCC1	99	88.586	ENSSTOG00000010361	MCCC1	99	84.211	Ictidomys_tridecemlineatus
ENSSSCG00000025942	MCCC1	99	80.961	ENSJJAG00000003543	Mccc1	99	77.406	Jaculus_jaculus
ENSSSCG00000025942	MCCC1	97	71.728	ENSLBEG00000001741	mccc1	92	68.981	Labrus_bergylta
ENSSSCG00000025942	MCCC1	99	76.792	ENSLACG00000018119	MCCC1	96	73.149	Latimeria_chalumnae
ENSSSCG00000025942	MCCC1	99	65.667	ENSLOCG00000000778	mccc1	97	63.404	Lepisosteus_oculatus
ENSSSCG00000025942	MCCC1	99	84.786	ENSLAFG00000018018	MCCC1	100	81.172	Loxodonta_africana
ENSSSCG00000025942	MCCC1	100	88.305	ENSMFAG00000000043	MCCC1	99	91.841	Macaca_fascicularis
ENSSSCG00000025942	MCCC1	100	88.305	ENSMMUG00000010553	MCCC1	99	91.841	Macaca_mulatta
ENSSSCG00000025942	MCCC1	100	88.136	ENSMNEG00000017163	MCCC1	98	87.701	Macaca_nemestrina
ENSSSCG00000025942	MCCC1	100	83.898	ENSMLEG00000039351	MCCC1	99	91.375	Mandrillus_leucophaeus
ENSSSCG00000025942	MCCC1	97	72.125	ENSMZEG00005015532	mccc1	99	66.338	Maylandia_zebra
ENSSSCG00000025942	MCCC1	99	78.498	ENSMGAG00000009494	MCCC1	100	75.072	Meleagris_gallopavo
ENSSSCG00000025942	MCCC1	100	86.949	ENSMICG00000048884	MCCC1	98	90.118	Microcebus_murinus
ENSSSCG00000025942	MCCC1	99	81.880	ENSMOCG00000003671	Mccc1	100	77.933	Microtus_ochrogaster
ENSSSCG00000025942	MCCC1	98	80.895	ENSMODG00000021288	MCCC1	98	76.536	Monodelphis_domestica
ENSSSCG00000025942	MCCC1	99	84.642	MGP_CAROLIEiJ_G0024932	Mccc1	100	80.614	Mus_caroli
ENSSSCG00000025942	MCCC1	99	84.471	ENSMUSG00000027709	Mccc1	100	80.474	Mus_musculus
ENSSSCG00000025942	MCCC1	99	84.471	MGP_SPRETEiJ_G0025866	Mccc1	100	80.474	Mus_spretus
ENSSSCG00000025942	MCCC1	99	87.884	ENSMPUG00000002371	MCCC1	87	84.416	Mustela_putorius_furo
ENSSSCG00000025942	MCCC1	98	88.774	ENSMLUG00000012257	MCCC1	99	84.174	Myotis_lucifugus
ENSSSCG00000025942	MCCC1	100	85.763	ENSNGAG00000001216	Mccc1	99	81.538	Nannospalax_galili
ENSSSCG00000025942	MCCC1	100	84.237	ENSNLEG00000005989	MCCC1	98	91.784	Nomascus_leucogenys
ENSSSCG00000025942	MCCC1	100	77.327	ENSOPRG00000007258	MCCC1	100	75.620	Ochotona_princeps
ENSSSCG00000025942	MCCC1	100	80.000	ENSODEG00000012286	MCCC1	100	77.008	Octodon_degus
ENSSSCG00000025942	MCCC1	97	72.125	ENSONIG00000008395	mccc1	99	66.245	Oreochromis_niloticus
ENSSSCG00000025942	MCCC1	99	82.564	ENSOANG00000011253	MCCC1	99	79.756	Ornithorhynchus_anatinus
ENSSSCG00000025942	MCCC1	100	77.966	ENSOCUG00000012393	MCCC1	100	76.138	Oryctolagus_cuniculus
ENSSSCG00000025942	MCCC1	98	71.007	ENSORLG00000011678	mccc1	99	66.811	Oryzias_latipes
ENSSSCG00000025942	MCCC1	98	71.181	ENSORLG00020005680	mccc1	98	67.493	Oryzias_latipes_hni
ENSSSCG00000025942	MCCC1	98	71.181	ENSORLG00015003526	mccc1	97	68.195	Oryzias_latipes_hsok
ENSSSCG00000025942	MCCC1	98	70.660	ENSOMEG00000011470	mccc1	99	65.585	Oryzias_melastigma
ENSSSCG00000025942	MCCC1	99	87.905	ENSOGAG00000000659	MCCC1	100	82.569	Otolemur_garnettii
ENSSSCG00000025942	MCCC1	99	89.438	ENSOARG00000020660	MCCC1	99	86.580	Ovis_aries
ENSSSCG00000025942	MCCC1	100	86.780	ENSPPAG00000036167	MCCC1	98	90.845	Pan_paniscus
ENSSSCG00000025942	MCCC1	100	88.983	ENSPPRG00000000127	MCCC1	97	92.180	Panthera_pardus
ENSSSCG00000025942	MCCC1	100	88.305	ENSPTIG00000018514	MCCC1	97	91.469	Panthera_tigris_altaica
ENSSSCG00000025942	MCCC1	100	86.610	ENSPTRG00000015662	MCCC1	98	91.080	Pan_troglodytes
ENSSSCG00000025942	MCCC1	100	88.305	ENSPANG00000006870	MCCC1	99	91.608	Papio_anubis
ENSSSCG00000025942	MCCC1	98	77.797	ENSPSIG00000017510	MCCC1	99	74.885	Pelodiscus_sinensis
ENSSSCG00000025942	MCCC1	98	67.014	ENSPMGG00000000155	mccc1	95	64.697	Periophthalmus_magnuspinnatus
ENSSSCG00000025942	MCCC1	99	85.052	ENSPEMG00000014164	Mccc1	99	80.645	Peromyscus_maniculatus_bairdii
ENSSSCG00000025942	MCCC1	99	82.222	ENSPCIG00000013027	MCCC1	84	77.731	Phascolarctos_cinereus
ENSSSCG00000025942	MCCC1	98	72.396	ENSPFOG00000019171	mccc1	96	68.421	Poecilia_formosa
ENSSSCG00000025942	MCCC1	98	72.222	ENSPLAG00000022735	mccc1	96	68.070	Poecilia_latipinna
ENSSSCG00000025942	MCCC1	98	72.222	ENSPMEG00000000664	mccc1	96	68.070	Poecilia_mexicana
ENSSSCG00000025942	MCCC1	100	87.797	ENSPPYG00000014331	MCCC1	100	83.448	Pongo_abelii
ENSSSCG00000025942	MCCC1	99	73.368	ENSPCAG00000003195	MCCC1	99	72.943	Procavia_capensis
ENSSSCG00000025942	MCCC1	100	88.136	ENSPCOG00000020095	MCCC1	98	90.588	Propithecus_coquereli
ENSSSCG00000025942	MCCC1	97	85.043	ENSPVAG00000013436	MCCC1	99	81.408	Pteropus_vampyrus
ENSSSCG00000025942	MCCC1	98	66.493	ENSPNAG00000025069	mccc1	99	65.441	Pygocentrus_nattereri
ENSSSCG00000025942	MCCC1	99	84.364	ENSRNOG00000013293	Mccc1	99	80.365	Rattus_norvegicus
ENSSSCG00000025942	MCCC1	100	87.797	ENSRBIG00000038726	MCCC1	98	92.254	Rhinopithecus_bieti
ENSSSCG00000025942	MCCC1	100	87.458	ENSRROG00000041247	MCCC1	98	92.019	Rhinopithecus_roxellana
ENSSSCG00000025942	MCCC1	100	86.780	ENSSBOG00000026219	MCCC1	99	90.974	Saimiri_boliviensis_boliviensis
ENSSSCG00000025942	MCCC1	98	81.411	ENSSHAG00000016104	MCCC1	99	78.468	Sarcophilus_harrisii
ENSSSCG00000025942	MCCC1	98	73.611	ENSSFOG00015007784	mccc1	96	69.534	Scleropages_formosus
ENSSSCG00000025942	MCCC1	98	71.528	ENSSMAG00000019667	mccc1	98	66.809	Scophthalmus_maximus
ENSSSCG00000025942	MCCC1	99	77.645	ENSSPUG00000014366	MCCC1	100	74.810	Sphenodon_punctatus
ENSSSCG00000025942	MCCC1	97	71.853	ENSSPAG00000011206	mccc1	98	66.477	Stegastes_partitus
ENSSSCG00000025942	MCCC1	99	78.669	ENSTGUG00000010506	MCCC1	100	75.923	Taeniopygia_guttata
ENSSSCG00000025942	MCCC1	100	77.119	ENSTBEG00000007988	MCCC1	100	75.405	Tupaia_belangeri
ENSSSCG00000025942	MCCC1	100	90.508	ENSTTRG00000016518	MCCC1	100	86.207	Tursiops_truncatus
ENSSSCG00000025942	MCCC1	67	87.315	ENSUAMG00000008378	MCCC1	100	90.278	Ursus_americanus
ENSSSCG00000025942	MCCC1	99	87.776	ENSUMAG00000006927	MCCC1	100	83.862	Ursus_maritimus
ENSSSCG00000025942	MCCC1	100	87.797	ENSVVUG00000006835	MCCC1	100	86.163	Vulpes_vulpes
ENSSSCG00000025942	MCCC1	99	75.815	ENSXETG00000016826	mccc1	99	71.067	Xenopus_tropicalis