EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000026038 (Gene tree)
Gene ID: 100621490
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1623 bases
Position: chr6:28615692-28617314
Accession: 100621490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000021251	DEAD	PF00270.29	2.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000027762	DDX28-201	1623	XM_003355776	ENSSSCP00000021251	540 (aa)	XP_003355824	I3LB32

Gene Model

Click here to download ENSSSCG00000026038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000026038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000026038	DDX28	74	31.436	ENSSSCG00000012169	-	59	31.436
ENSSSCG00000026038	DDX28	66	31.564	ENSSSCG00000000104	DDX17	51	31.564
ENSSSCG00000026038	DDX28	70	31.405	ENSSSCG00000008619	DDX1	60	31.405
ENSSSCG00000026038	DDX28	67	30.412	ENSSSCG00000009771	DDX55	63	30.412
ENSSSCG00000026038	DDX28	72	36.132	ENSSSCG00000033149	DDX47	78	36.031
ENSSSCG00000026038	DDX28	71	30.730	ENSSSCG00000024444	DDX59	59	30.730
ENSSSCG00000026038	DDX28	70	30.000	ENSSSCG00000032092	DDX5	66	30.854
ENSSSCG00000026038	DDX28	73	31.592	ENSSSCG00000025329	DDX49	77	31.486
ENSSSCG00000026038	DDX28	73	30.227	ENSSSCG00000004287	-	60	30.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000026038	DDX28	100	86.111	ENSG00000182810	DDX28	100	86.111	Homo_sapiens
ENSSSCG00000026038	DDX28	94	47.776	ENSAPOG00000000991	ddx28	89	47.582	Acanthochromis_polyacanthus
ENSSSCG00000026038	DDX28	99	86.456	ENSAMEG00000019426	DDX28	99	86.271	Ailuropoda_melanoleuca
ENSSSCG00000026038	DDX28	93	47.389	ENSACIG00000021615	ddx28	85	47.959	Amphilophus_citrinellus
ENSSSCG00000026038	DDX28	94	48.162	ENSAOCG00000004610	ddx28	89	47.969	Amphiprion_ocellaris
ENSSSCG00000026038	DDX28	94	48.162	ENSAPEG00000002143	ddx28	89	47.969	Amphiprion_percula
ENSSSCG00000026038	DDX28	95	49.427	ENSATEG00000018691	ddx28	91	49.237	Anabas_testudineus
ENSSSCG00000026038	DDX28	94	54.688	ENSACAG00000009755	DDX28	94	54.688	Anolis_carolinensis
ENSSSCG00000026038	DDX28	93	46.304	ENSACLG00000012984	ddx28	89	46.304	Astatotilapia_calliptera
ENSSSCG00000026038	DDX28	94	48.393	ENSAMXG00000005878	ddx28	91	48.204	Astyanax_mexicanus
ENSSSCG00000026038	DDX28	100	92.222	ENSBTAG00000004290	DDX28	99	92.222	Bos_taurus
ENSSSCG00000026038	DDX28	98	86.389	ENSCAFG00000020327	DDX28	99	86.200	Canis_familiaris
ENSSSCG00000026038	DDX28	98	86.389	ENSCAFG00020019785	DDX28	99	86.200	Canis_lupus_dingo
ENSSSCG00000026038	DDX28	97	91.379	ENSCHIG00000009658	DDX28	99	91.111	Capra_hircus
ENSSSCG00000026038	DDX28	99	81.076	ENSCPOG00000013746	DDX28	99	81.076	Cavia_porcellus
ENSSSCG00000026038	DDX28	99	84.416	ENSCSAG00000018472	DDX28	99	84.416	Chlorocebus_sabaeus
ENSSSCG00000026038	DDX28	90	58.367	ENSCPBG00000012105	DDX28	85	59.861	Chrysemys_picta_bellii
ENSSSCG00000026038	DDX28	68	40.054	ENSCSAVG00000006341	-	94	40.054	Ciona_savignyi
ENSSSCG00000026038	DDX28	97	82.824	ENSCGRG00001024412	Ddx28	100	82.824	Cricetulus_griseus_chok1gshd
ENSSSCG00000026038	DDX28	95	48.282	ENSCSEG00000011651	ddx28	91	48.084	Cynoglossus_semilaevis
ENSSSCG00000026038	DDX28	96	49.623	ENSCVAG00000004044	ddx28	93	49.434	Cyprinodon_variegatus
ENSSSCG00000026038	DDX28	93	49.414	ENSDARG00000060411	ddx28	85	50.311	Danio_rerio
ENSSSCG00000026038	DDX28	68	88.587	ENSDNOG00000033593	DDX28	99	88.587	Dasypus_novemcinctus
ENSSSCG00000026038	DDX28	99	80.891	ENSDORG00000028868	Ddx28	99	80.891	Dipodomys_ordii
ENSSSCG00000026038	DDX28	88	34.161	FBgn0086130	Dbp21E2	87	34.021	Drosophila_melanogaster
ENSSSCG00000026038	DDX28	100	83.333	ENSETEG00000001062	-	100	83.333	Echinops_telfairi
ENSSSCG00000026038	DDX28	74	44.271	ENSEBUG00000004791	ddx28	72	41.475	Eptatretus_burgeri
ENSSSCG00000026038	DDX28	100	90.000	ENSEASG00005020387	DDX28	100	90.000	Equus_asinus_asinus
ENSSSCG00000026038	DDX28	100	90.741	ENSECAG00000006451	DDX28	100	90.741	Equus_caballus
ENSSSCG00000026038	DDX28	77	75.962	ENSEEUG00000005017	DDX28	97	75.962	Erinaceus_europaeus
ENSSSCG00000026038	DDX28	93	49.903	ENSELUG00000005302	ddx28	96	49.708	Esox_lucius
ENSSSCG00000026038	DDX28	99	87.755	ENSFCAG00000012858	DDX28	99	87.755	Felis_catus
ENSSSCG00000026038	DDX28	94	49.136	ENSFHEG00000012573	ddx28	91	49.231	Fundulus_heteroclitus
ENSSSCG00000026038	DDX28	95	46.947	ENSGMOG00000017045	ddx28	97	46.743	Gadus_morhua
ENSSSCG00000026038	DDX28	94	50.382	ENSGALG00000048700	DDX28	83	52.245	Gallus_gallus
ENSSSCG00000026038	DDX28	97	47.842	ENSGAFG00000009249	ddx28	92	47.655	Gambusia_affinis
ENSSSCG00000026038	DDX28	99	48.087	ENSGACG00000016367	ddx28	99	47.905	Gasterosteus_aculeatus
ENSSSCG00000026038	DDX28	81	56.757	ENSGAGG00000004565	DDX28	96	56.787	Gopherus_agassizii
ENSSSCG00000026038	DDX28	100	86.296	ENSGGOG00000001220	DDX28	100	86.296	Gorilla_gorilla
ENSSSCG00000026038	DDX28	93	48.249	ENSHBUG00000001016	ddx28	90	48.249	Haplochromis_burtoni
ENSSSCG00000026038	DDX28	94	45.525	ENSHCOG00000017590	ddx28	92	45.331	Hippocampus_comes
ENSSSCG00000026038	DDX28	94	48.748	ENSIPUG00000017350	Ddx28	90	48.555	Ictalurus_punctatus
ENSSSCG00000026038	DDX28	99	83.488	ENSSTOG00000002064	DDX28	99	83.488	Ictidomys_tridecemlineatus
ENSSSCG00000026038	DDX28	99	80.037	ENSJJAG00000012460	-	99	80.037	Jaculus_jaculus
ENSSSCG00000026038	DDX28	97	46.704	ENSKMAG00000018183	ddx28	93	46.516	Kryptolebias_marmoratus
ENSSSCG00000026038	DDX28	95	48.084	ENSLBEG00000006072	ddx28	91	47.893	Labrus_bergylta
ENSSSCG00000026038	DDX28	93	53.635	ENSLACG00000005578	DDX28	87	53.635	Latimeria_chalumnae
ENSSSCG00000026038	DDX28	93	51.644	ENSLOCG00000017604	ddx28	90	51.644	Lepisosteus_oculatus
ENSSSCG00000026038	DDX28	96	86.434	ENSLAFG00000031239	DDX28	100	85.556	Loxodonta_africana
ENSSSCG00000026038	DDX28	99	83.859	ENSMMUG00000010836	DDX28	99	83.859	Macaca_mulatta
ENSSSCG00000026038	DDX28	93	48.162	ENSMAMG00000020220	ddx28	90	47.969	Mastacembelus_armatus
ENSSSCG00000026038	DDX28	93	48.444	ENSMZEG00005009292	ddx28	90	48.444	Maylandia_zebra
ENSSSCG00000026038	DDX28	96	71.209	ENSMICG00000012346	-	99	71.296	Microcebus_murinus
ENSSSCG00000026038	DDX28	99	81.633	ENSMOCG00000009815	Ddx28	99	81.633	Microtus_ochrogaster
ENSSSCG00000026038	DDX28	94	48.155	ENSMMOG00000000270	ddx28	91	47.801	Mola_mola
ENSSSCG00000026038	DDX28	96	72.394	ENSMODG00000005303	DDX28	98	70.446	Monodelphis_domestica
ENSSSCG00000026038	DDX28	94	49.225	ENSMALG00000008864	ddx28	90	49.031	Monopterus_albus
ENSSSCG00000026038	DDX28	100	81.111	MGP_CAROLIEiJ_G0031510	Ddx28	100	81.111	Mus_caroli
ENSSSCG00000026038	DDX28	96	82.342	ENSMUSG00000045538	Ddx28	100	81.481	Mus_musculus
ENSSSCG00000026038	DDX28	100	82.255	MGP_PahariEiJ_G0023110	Ddx28	100	81.852	Mus_pahari
ENSSSCG00000026038	DDX28	96	82.150	MGP_SPRETEiJ_G0032628	Ddx28	100	81.296	Mus_spretus
ENSSSCG00000026038	DDX28	75	85.608	ENSMPUG00000006915	DDX28	100	85.608	Mustela_putorius_furo
ENSSSCG00000026038	DDX28	98	85.094	ENSMLUG00000005899	DDX28	98	85.094	Myotis_lucifugus
ENSSSCG00000026038	DDX28	99	82.714	ENSNGAG00000015762	Ddx28	99	82.900	Nannospalax_galili
ENSSSCG00000026038	DDX28	93	48.242	ENSNBRG00000001337	ddx28	91	48.242	Neolamprologus_brichardi
ENSSSCG00000026038	DDX28	93	48.444	ENSONIG00000020597	ddx28	90	48.444	Oreochromis_niloticus
ENSSSCG00000026038	DDX28	55	61.074	ENSOANG00000003551	-	100	61.074	Ornithorhynchus_anatinus
ENSSSCG00000026038	DDX28	100	83.519	ENSOCUG00000023074	DDX28	100	83.519	Oryctolagus_cuniculus
ENSSSCG00000026038	DDX28	94	48.643	ENSORLG00000011968	ddx28	91	48.738	Oryzias_latipes
ENSSSCG00000026038	DDX28	94	48.544	ENSORLG00020001951	ddx28	92	48.544	Oryzias_latipes_hni
ENSSSCG00000026038	DDX28	94	48.062	ENSORLG00015023030	ddx28	92	48.155	Oryzias_latipes_hsok
ENSSSCG00000026038	DDX28	94	48.833	ENSOMEG00000012445	ddx28	90	48.833	Oryzias_melastigma
ENSSSCG00000026038	DDX28	98	84.091	ENSOGAG00000016895	DDX28	99	84.074	Otolemur_garnettii
ENSSSCG00000026038	DDX28	82	87.416	ENSOARG00000003313	DDX28	100	87.416	Ovis_aries
ENSSSCG00000026038	DDX28	100	82.407	ENSPPAG00000036971	DDX28	100	82.407	Pan_paniscus
ENSSSCG00000026038	DDX28	99	89.054	ENSPPRG00000018322	DDX28	99	89.054	Panthera_pardus
ENSSSCG00000026038	DDX28	99	85.529	ENSPTIG00000006444	DDX28	99	85.529	Panthera_tigris_altaica
ENSSSCG00000026038	DDX28	100	85.926	ENSPTRG00000008258	DDX28	100	85.926	Pan_troglodytes
ENSSSCG00000026038	DDX28	93	50.291	ENSPKIG00000021200	ddx28	93	50.291	Paramormyrops_kingsleyae
ENSSSCG00000026038	DDX28	55	61.486	ENSPSIG00000001127	DDX28	97	61.486	Pelodiscus_sinensis
ENSSSCG00000026038	DDX28	92	45.490	ENSPMGG00000007908	ddx28	88	45.383	Periophthalmus_magnuspinnatus
ENSSSCG00000026038	DDX28	100	81.365	ENSPEMG00000003395	Ddx28	100	81.365	Peromyscus_maniculatus_bairdii
ENSSSCG00000026038	DDX28	52	48.936	ENSPMAG00000006983	DDX28	93	48.936	Petromyzon_marinus
ENSSSCG00000026038	DDX28	94	48.842	ENSPFOG00000020838	DDX28	90	48.649	Poecilia_formosa
ENSSSCG00000026038	DDX28	94	48.842	ENSPFOG00000020952	ddx28	89	48.649	Poecilia_formosa
ENSSSCG00000026038	DDX28	94	48.842	ENSPLAG00000016292	ddx28	89	48.649	Poecilia_latipinna
ENSSSCG00000026038	DDX28	94	48.842	ENSPMEG00000011311	ddx28	88	48.649	Poecilia_mexicana
ENSSSCG00000026038	DDX28	94	48.638	ENSPREG00000002899	ddx28	88	48.444	Poecilia_reticulata
ENSSSCG00000026038	DDX28	99	86.245	ENSPPYG00000007481	DDX28	100	86.245	Pongo_abelii
ENSSSCG00000026038	DDX28	100	85.767	ENSPCOG00000024632	DDX28	100	85.767	Propithecus_coquereli
ENSSSCG00000026038	DDX28	93	48.444	ENSPNYG00000018804	ddx28	90	48.444	Pundamilia_nyererei
ENSSSCG00000026038	DDX28	93	49.614	ENSPNAG00000014597	ddx28	94	49.421	Pygocentrus_nattereri
ENSSSCG00000026038	DDX28	99	79.963	ENSRNOG00000019817	Ddx28	99	79.963	Rattus_norvegicus
ENSSSCG00000026038	DDX28	93	49.808	ENSSFOG00015010181	ddx28	92	49.808	Scleropages_formosus
ENSSSCG00000026038	DDX28	88	49.795	ENSSMAG00000006831	ddx28	90	49.795	Scophthalmus_maximus
ENSSSCG00000026038	DDX28	93	47.573	ENSSDUG00000003257	ddx28	89	47.379	Seriola_dumerili
ENSSSCG00000026038	DDX28	93	47.184	ENSSLDG00000004513	ddx28	89	46.990	Seriola_lalandi_dorsalis
ENSSSCG00000026038	DDX28	100	82.593	ENSSARG00000014169	DDX28	100	82.593	Sorex_araneus
ENSSSCG00000026038	DDX28	94	48.170	ENSSPAG00000000988	ddx28	91	48.170	Stegastes_partitus
ENSSSCG00000026038	DDX28	96	47.801	ENSTRUG00000007815	ddx28	94	47.610	Takifugu_rubripes
ENSSSCG00000026038	DDX28	94	48.521	ENSTNIG00000011352	ddx28	99	48.323	Tetraodon_nigroviridis
ENSSSCG00000026038	DDX28	87	88.584	ENSTBEG00000017695	DDX28	87	88.584	Tupaia_belangeri
ENSSSCG00000026038	DDX28	99	88.683	ENSUAMG00000016116	DDX28	99	88.683	Ursus_americanus
ENSSSCG00000026038	DDX28	90	83.711	ENSUMAG00000019200	DDX28	89	90.138	Ursus_maritimus
ENSSSCG00000026038	DDX28	81	84.475	ENSVVUG00000012876	DDX28	87	84.247	Vulpes_vulpes
ENSSSCG00000026038	DDX28	94	49.606	ENSXETG00000005435	ddx28	99	49.216	Xenopus_tropicalis
ENSSSCG00000026038	DDX28	94	49.035	ENSXCOG00000012364	ddx28	90	48.842	Xiphophorus_couchianus
ENSSSCG00000026038	DDX28	93	49.412	ENSXMAG00000019603	ddx28	91	49.216	Xiphophorus_maculatus