EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000026333 (Gene tree)
Gene ID: 100521495
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 22271 bases
Position: chr5:19639206-19661476
Accession: 100521495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025386	zf-U11-48K	PF05253.12	2.5e-20	1	2
ENSSSCP00000025386	zf-U11-48K	PF05253.12	2.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031179	GTSF1-201	4057	XM_003126205	ENSSSCP00000025386	167 (aa)	XP_003126253	I3LMR5

Gene Model

Click here to download ENSSSCG00000026333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000026333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000026333	GTSF1	62	34.862	ENSSSCG00000000296	-	67	34.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000026333	GTSF1	100	92.216	ENSG00000170627	GTSF1	100	92.216	Homo_sapiens
ENSSSCG00000026333	GTSF1	88	45.946	ENSAPOG00000022724	-	95	45.946	Acanthochromis_polyacanthus
ENSSSCG00000026333	GTSF1	97	98.148	ENSAMEG00000000939	GTSF1	96	98.148	Ailuropoda_melanoleuca
ENSSSCG00000026333	GTSF1	88	43.624	ENSAOCG00000022214	-	72	42.675	Amphiprion_ocellaris
ENSSSCG00000026333	GTSF1	75	61.111	ENSAPLG00000004814	GTSF1	93	61.111	Anas_platyrhynchos
ENSSSCG00000026333	GTSF1	97	61.728	ENSACAG00000014260	-	94	61.728	Anolis_carolinensis
ENSSSCG00000026333	GTSF1	69	47.414	ENSACAG00000029590	-	95	47.414	Anolis_carolinensis
ENSSSCG00000026333	GTSF1	100	91.617	ENSANAG00000024529	GTSF1	100	91.617	Aotus_nancymaae
ENSSSCG00000026333	GTSF1	100	96.407	ENSBTAG00000018085	GTSF1	100	96.407	Bos_taurus
ENSSSCG00000026333	GTSF1	100	86.826	ENSCJAG00000039915	-	88	86.826	Callithrix_jacchus
ENSSSCG00000026333	GTSF1	100	92.216	ENSCJAG00000018968	-	100	92.216	Callithrix_jacchus
ENSSSCG00000026333	GTSF1	100	98.204	ENSCAFG00000006465	-	100	98.204	Canis_familiaris
ENSSSCG00000026333	GTSF1	100	98.204	ENSCAFG00020020373	-	94	97.561	Canis_lupus_dingo
ENSSSCG00000026333	GTSF1	98	95.092	ENSCHIG00000012215	-	95	95.092	Capra_hircus
ENSSSCG00000026333	GTSF1	99	94.578	ENSTSYG00000004679	-	100	94.578	Carlito_syrichta
ENSSSCG00000026333	GTSF1	100	76.048	ENSTSYG00000035266	-	100	76.048	Carlito_syrichta
ENSSSCG00000026333	GTSF1	100	95.808	ENSCPOG00000008743	GTSF1	100	95.808	Cavia_porcellus
ENSSSCG00000026333	GTSF1	96	67.485	ENSCCAG00000032808	GTSF1	100	67.485	Cebus_capucinus
ENSSSCG00000026333	GTSF1	100	92.216	ENSCATG00000036328	GTSF1	100	92.216	Cercocebus_atys
ENSSSCG00000026333	GTSF1	100	95.210	ENSCLAG00000012811	GTSF1	100	95.210	Chinchilla_lanigera
ENSSSCG00000026333	GTSF1	94	91.720	ENSCSAG00000005394	GTSF1	99	91.720	Chlorocebus_sabaeus
ENSSSCG00000026333	GTSF1	100	97.605	ENSCHOG00000001659	GTSF1	100	97.605	Choloepus_hoffmanni
ENSSSCG00000026333	GTSF1	95	60.625	ENSCPBG00000024905	-	86	60.625	Chrysemys_picta_bellii
ENSSSCG00000026333	GTSF1	99	71.687	ENSCPBG00000005134	-	72	71.687	Chrysemys_picta_bellii
ENSSSCG00000026333	GTSF1	100	86.826	ENSCANG00000031776	-	100	86.826	Colobus_angolensis_palliatus
ENSSSCG00000026333	GTSF1	100	91.018	ENSCANG00000033118	GTSF1	100	91.018	Colobus_angolensis_palliatus
ENSSSCG00000026333	GTSF1	100	97.006	ENSCGRG00001013814	Gtsf1	100	97.006	Cricetulus_griseus_chok1gshd
ENSSSCG00000026333	GTSF1	100	97.006	ENSCGRG00000007733	Gtsf1	100	97.006	Cricetulus_griseus_crigri
ENSSSCG00000026333	GTSF1	94	96.815	ENSDNOG00000001438	-	90	96.815	Dasypus_novemcinctus
ENSSSCG00000026333	GTSF1	100	97.006	ENSDORG00000003228	Gtsf1	100	97.006	Dipodomys_ordii
ENSSSCG00000026333	GTSF1	100	94.611	ENSETEG00000009310	GTSF1	100	94.611	Echinops_telfairi
ENSSSCG00000026333	GTSF1	100	97.006	ENSEASG00005010260	GTSF1	90	97.006	Equus_asinus_asinus
ENSSSCG00000026333	GTSF1	100	97.006	ENSECAG00000013618	GTSF1	100	97.006	Equus_caballus
ENSSSCG00000026333	GTSF1	100	98.204	ENSEEUG00000005185	GTSF1	100	98.204	Erinaceus_europaeus
ENSSSCG00000026333	GTSF1	100	69.461	ENSFCAG00000023672	-	90	69.461	Felis_catus
ENSSSCG00000026333	GTSF1	100	98.204	ENSFCAG00000010156	-	100	98.204	Felis_catus
ENSSSCG00000026333	GTSF1	75	55.556	ENSFALG00000007613	-	100	55.556	Ficedula_albicollis
ENSSSCG00000026333	GTSF1	100	91.018	ENSFDAG00000009383	GTSF1	100	91.018	Fukomys_damarensis
ENSSSCG00000026333	GTSF1	92	55.844	ENSGALG00000001109	GTSF1	95	55.844	Gallus_gallus
ENSSSCG00000026333	GTSF1	88	48.299	ENSGACG00000010783	-	80	48.299	Gasterosteus_aculeatus
ENSSSCG00000026333	GTSF1	62	52.830	ENSGAGG00000016342	-	99	52.830	Gopherus_agassizii
ENSSSCG00000026333	GTSF1	66	45.946	ENSGAGG00000018216	-	89	45.946	Gopherus_agassizii
ENSSSCG00000026333	GTSF1	99	62.874	ENSGAGG00000011062	GTSF1	86	62.874	Gopherus_agassizii
ENSSSCG00000026333	GTSF1	100	92.216	ENSGGOG00000016063	GTSF1	100	92.216	Gorilla_gorilla
ENSSSCG00000026333	GTSF1	100	93.413	ENSHGLG00000002436	GTSF1	100	93.413	Heterocephalus_glaber_female
ENSSSCG00000026333	GTSF1	100	93.413	ENSHGLG00100017301	GTSF1	100	93.413	Heterocephalus_glaber_male
ENSSSCG00000026333	GTSF1	96	46.296	ENSIPUG00000002483	-	84	46.541	Ictalurus_punctatus
ENSSSCG00000026333	GTSF1	100	97.605	ENSSTOG00000025170	GTSF1	100	97.605	Ictidomys_tridecemlineatus
ENSSSCG00000026333	GTSF1	100	91.617	ENSJJAG00000003323	-	100	91.617	Jaculus_jaculus
ENSSSCG00000026333	GTSF1	100	85.629	ENSJJAG00000017442	-	100	85.629	Jaculus_jaculus
ENSSSCG00000026333	GTSF1	88	47.619	ENSKMAG00000006038	-	80	47.619	Kryptolebias_marmoratus
ENSSSCG00000026333	GTSF1	95	62.658	ENSLACG00000008870	GTSF1	82	62.658	Latimeria_chalumnae
ENSSSCG00000026333	GTSF1	97	98.148	ENSLAFG00000016318	GTSF1	97	98.148	Loxodonta_africana
ENSSSCG00000026333	GTSF1	100	92.216	ENSMFAG00000041178	GTSF1	100	92.216	Macaca_fascicularis
ENSSSCG00000026333	GTSF1	100	92.216	ENSMMUG00000003758	GTSF1	100	92.216	Macaca_mulatta
ENSSSCG00000026333	GTSF1	100	92.216	ENSMNEG00000036779	GTSF1	100	92.216	Macaca_nemestrina
ENSSSCG00000026333	GTSF1	100	91.617	ENSMLEG00000028375	GTSF1	100	91.617	Mandrillus_leucophaeus
ENSSSCG00000026333	GTSF1	80	56.716	ENSMGAG00000000685	GTSF1	95	56.716	Meleagris_gallopavo
ENSSSCG00000026333	GTSF1	100	72.455	ENSMAUG00000018746	Gtsf1	99	72.455	Mesocricetus_auratus
ENSSSCG00000026333	GTSF1	100	98.204	ENSMICG00000008444	-	100	98.204	Microcebus_murinus
ENSSSCG00000026333	GTSF1	100	96.407	ENSMOCG00000018889	Gtsf1	100	96.407	Microtus_ochrogaster
ENSSSCG00000026333	GTSF1	100	88.623	ENSMODG00000019422	GTSF1	100	88.623	Monodelphis_domestica
ENSSSCG00000026333	GTSF1	100	96.407	MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.407	Mus_caroli
ENSSSCG00000026333	GTSF1	100	96.407	ENSMUSG00000022487	Gtsf1	100	96.407	Mus_musculus
ENSSSCG00000026333	GTSF1	100	95.808	MGP_PahariEiJ_G0020378	Gtsf1	100	95.808	Mus_pahari
ENSSSCG00000026333	GTSF1	100	96.407	MGP_SPRETEiJ_G0021272	Gtsf1	100	96.407	Mus_spretus
ENSSSCG00000026333	GTSF1	98	98.171	ENSMPUG00000005669	-	98	98.171	Mustela_putorius_furo
ENSSSCG00000026333	GTSF1	100	89.820	ENSMPUG00000019140	-	100	89.820	Mustela_putorius_furo
ENSSSCG00000026333	GTSF1	100	97.006	ENSMPUG00000019323	-	100	97.006	Mustela_putorius_furo
ENSSSCG00000026333	GTSF1	100	94.012	ENSMLUG00000026557	-	100	94.012	Myotis_lucifugus
ENSSSCG00000026333	GTSF1	100	96.407	ENSMLUG00000012961	-	100	96.407	Myotis_lucifugus
ENSSSCG00000026333	GTSF1	100	95.808	ENSNGAG00000014213	Gtsf1	100	95.808	Nannospalax_galili
ENSSSCG00000026333	GTSF1	100	91.617	ENSNLEG00000017635	GTSF1	100	91.617	Nomascus_leucogenys
ENSSSCG00000026333	GTSF1	100	77.844	ENSMEUG00000016206	GTSF1	100	77.844	Notamacropus_eugenii
ENSSSCG00000026333	GTSF1	100	69.461	ENSOPRG00000017277	GTSF1	100	69.461	Ochotona_princeps
ENSSSCG00000026333	GTSF1	100	95.808	ENSODEG00000014220	GTSF1	100	95.808	Octodon_degus
ENSSSCG00000026333	GTSF1	98	69.091	ENSOANG00000011386	GTSF1	99	69.091	Ornithorhynchus_anatinus
ENSSSCG00000026333	GTSF1	100	96.407	ENSOCUG00000024495	GTSF1	100	96.407	Oryctolagus_cuniculus
ENSSSCG00000026333	GTSF1	68	50.442	ENSORLG00015005017	-	70	50.442	Oryzias_latipes_hsok
ENSSSCG00000026333	GTSF1	95	95.597	ENSOGAG00000017227	GTSF1	94	95.597	Otolemur_garnettii
ENSSSCG00000026333	GTSF1	100	97.006	ENSOARG00000016162	GTSF1	100	97.006	Ovis_aries
ENSSSCG00000026333	GTSF1	100	92.216	ENSPPAG00000028506	GTSF1	100	92.216	Pan_paniscus
ENSSSCG00000026333	GTSF1	100	88.024	ENSPPRG00000017612	-	91	88.024	Panthera_pardus
ENSSSCG00000026333	GTSF1	100	98.204	ENSPPRG00000004344	-	100	98.204	Panthera_pardus
ENSSSCG00000026333	GTSF1	100	98.204	ENSPTIG00000020415	-	100	98.204	Panthera_tigris_altaica
ENSSSCG00000026333	GTSF1	100	88.623	ENSPTIG00000010868	-	91	88.623	Panthera_tigris_altaica
ENSSSCG00000026333	GTSF1	100	92.216	ENSPTRG00000005041	GTSF1	100	92.216	Pan_troglodytes
ENSSSCG00000026333	GTSF1	100	92.216	ENSPANG00000020579	GTSF1	100	92.216	Papio_anubis
ENSSSCG00000026333	GTSF1	83	44.295	ENSPSIG00000009839	-	93	44.295	Pelodiscus_sinensis
ENSSSCG00000026333	GTSF1	98	69.697	ENSPSIG00000009968	GTSF1	81	69.697	Pelodiscus_sinensis
ENSSSCG00000026333	GTSF1	100	97.006	ENSPEMG00000009595	Gtsf1	100	97.006	Peromyscus_maniculatus_bairdii
ENSSSCG00000026333	GTSF1	100	85.030	ENSPCIG00000006731	GTSF1	100	85.030	Phascolarctos_cinereus
ENSSSCG00000026333	GTSF1	100	92.216	ENSPPYG00000004605	GTSF1	100	92.216	Pongo_abelii
ENSSSCG00000026333	GTSF1	100	97.605	ENSPCOG00000016907	-	100	97.605	Propithecus_coquereli
ENSSSCG00000026333	GTSF1	99	83.432	ENSPCOG00000015201	-	99	83.432	Propithecus_coquereli
ENSSSCG00000026333	GTSF1	100	98.204	ENSPVAG00000000333	GTSF1	100	98.204	Pteropus_vampyrus
ENSSSCG00000026333	GTSF1	90	46.711	ENSPNAG00000005737	-	82	46.711	Pygocentrus_nattereri
ENSSSCG00000026333	GTSF1	100	96.407	ENSRNOG00000036831	Gtsf1	88	96.407	Rattus_norvegicus
ENSSSCG00000026333	GTSF1	100	83.832	ENSRBIG00000039916	-	89	83.832	Rhinopithecus_bieti
ENSSSCG00000026333	GTSF1	100	91.617	ENSRBIG00000043438	-	100	91.617	Rhinopithecus_bieti
ENSSSCG00000026333	GTSF1	100	92.216	ENSRROG00000008137	GTSF1	100	92.216	Rhinopithecus_roxellana
ENSSSCG00000026333	GTSF1	100	92.814	ENSSBOG00000029460	GTSF1	100	92.814	Saimiri_boliviensis_boliviensis
ENSSSCG00000026333	GTSF1	100	88.623	ENSSHAG00000011633	GTSF1	100	88.623	Sarcophilus_harrisii
ENSSSCG00000026333	GTSF1	78	97.692	ENSSARG00000004928	GTSF1	78	97.692	Sorex_araneus
ENSSSCG00000026333	GTSF1	98	52.147	ENSSPUG00000010064	GTSF1	93	72.727	Sphenodon_punctatus
ENSSSCG00000026333	GTSF1	76	57.812	ENSTGUG00000002008	-	100	57.812	Taeniopygia_guttata
ENSSSCG00000026333	GTSF1	96	95.652	ENSTBEG00000006154	GTSF1	100	95.652	Tupaia_belangeri
ENSSSCG00000026333	GTSF1	100	95.210	ENSTTRG00000004470	GTSF1	100	95.210	Tursiops_truncatus
ENSSSCG00000026333	GTSF1	100	98.802	ENSUAMG00000021669	GTSF1	94	98.171	Ursus_americanus
ENSSSCG00000026333	GTSF1	100	98.802	ENSUMAG00000011279	GTSF1	100	98.802	Ursus_maritimus
ENSSSCG00000026333	GTSF1	100	96.407	ENSVPAG00000007016	GTSF1	100	96.407	Vicugna_pacos
ENSSSCG00000026333	GTSF1	100	98.204	ENSVVUG00000023687	-	84	98.204	Vulpes_vulpes
ENSSSCG00000026333	GTSF1	96	63.975	ENSXETG00000033546	gtsf1	71	63.975	Xenopus_tropicalis