EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000026498 (Gene tree)
Gene ID: 100627213
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 160193 bases
Position: chr5:22554399-22714591
Accession: 100627213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043500	R3H	PF01424.22	3.5e-10	1	1
ENSSSCP00000023956	R3H	PF01424.22	4e-10	1	1
ENSSSCP00000054043	R3H	PF01424.22	4.1e-10	1	1
ENSSSCP00000024177	R3H	PF01424.22	4.3e-10	1	1
ENSSSCP00000045068	R3H	PF01424.22	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031367	R3HDM2-203	3707	-	ENSSSCP00000023956	990 (aa)	-	I3LIQ0
ENSSSCT00000055158	R3HDM2-201	7940	XM_021091837	ENSSSCP00000045068	988 (aa)	XP_020947496	I3LJB8
ENSSSCT00000038632	R3HDM2-204	4622	XM_021091859	ENSSSCP00000043500	871 (aa)	XP_020947518	A0A287AHZ2
ENSSSCT00000063402	R3HDM2-202	7844	XM_021091844	ENSSSCP00000054043	956 (aa)	XP_020947503	A0A287BD49
ENSSSCT00000027063	R3HDM2-205	3950	XM_021091832	ENSSSCP00000024177	988 (aa)	XP_020947491	I3LJB8

Gene Model

Click here to download ENSSSCG00000026498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000026498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000026498	R3HDM2	96	60.459	ENSSSCG00000015692	R3HDM1	99	50.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000026498	R3HDM2	100	97.778	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSSSCG00000026498	R3HDM2	100	66.992	ENSAPOG00000020341	r3hdm2	96	67.843	Acanthochromis_polyacanthus
ENSSSCG00000026498	R3HDM2	62	35.901	ENSAPOG00000021873	-	73	32.865	Acanthochromis_polyacanthus
ENSSSCG00000026498	R3HDM2	100	97.491	ENSAMEG00000004812	R3HDM2	100	92.830	Ailuropoda_melanoleuca
ENSSSCG00000026498	R3HDM2	93	68.490	ENSACIG00000016146	r3hdm2	98	67.462	Amphilophus_citrinellus
ENSSSCG00000026498	R3HDM2	100	66.884	ENSAOCG00000023694	r3hdm2	96	66.535	Amphiprion_ocellaris
ENSSSCG00000026498	R3HDM2	65	34.899	ENSAPEG00000014325	-	72	33.159	Amphiprion_percula
ENSSSCG00000026498	R3HDM2	100	65.472	ENSAPEG00000008851	r3hdm2	100	67.603	Amphiprion_percula
ENSSSCG00000026498	R3HDM2	100	63.070	ENSATEG00000025024	r3hdm2	100	68.868	Anabas_testudineus
ENSSSCG00000026498	R3HDM2	74	75.342	ENSAPLG00000004298	R3HDM2	92	87.286	Anas_platyrhynchos
ENSSSCG00000026498	R3HDM2	100	82.220	ENSACAG00000006388	R3HDM2	100	82.318	Anolis_carolinensis
ENSSSCG00000026498	R3HDM2	98	93.388	ENSANAG00000031310	-	100	93.388	Aotus_nancymaae
ENSSSCG00000026498	R3HDM2	100	97.776	ENSANAG00000025397	-	100	97.776	Aotus_nancymaae
ENSSSCG00000026498	R3HDM2	100	66.558	ENSACLG00000019106	r3hdm2	96	66.304	Astatotilapia_calliptera
ENSSSCG00000026498	R3HDM2	100	54.911	ENSAMXG00000017180	r3hdm2	99	61.270	Astyanax_mexicanus
ENSSSCG00000026498	R3HDM2	100	98.079	ENSBTAG00000018361	R3HDM2	100	98.079	Bos_taurus
ENSSSCG00000026498	R3HDM2	100	97.470	ENSCJAG00000007365	R3HDM2	100	97.470	Callithrix_jacchus
ENSSSCG00000026498	R3HDM2	100	97.384	ENSCAFG00000000215	R3HDM2	100	97.384	Canis_familiaris
ENSSSCG00000026498	R3HDM2	100	97.376	ENSCAFG00020023713	R3HDM2	100	97.376	Canis_lupus_dingo
ENSSSCG00000026498	R3HDM2	100	97.472	ENSCHIG00000014022	R3HDM2	100	97.472	Capra_hircus
ENSSSCG00000026498	R3HDM2	100	95.477	ENSTSYG00000001449	R3HDM2	100	95.516	Carlito_syrichta
ENSSSCG00000026498	R3HDM2	100	94.604	ENSCPOG00000009217	R3HDM2	100	94.433	Cavia_porcellus
ENSSSCG00000026498	R3HDM2	89	97.943	ENSCCAG00000026083	R3HDM2	100	97.943	Cebus_capucinus
ENSSSCG00000026498	R3HDM2	100	97.576	ENSCATG00000036929	R3HDM2	100	97.576	Cercocebus_atys
ENSSSCG00000026498	R3HDM2	100	95.091	ENSCLAG00000011997	R3HDM2	100	94.763	Chinchilla_lanigera
ENSSSCG00000026498	R3HDM2	100	95.097	ENSCSAG00000004911	R3HDM2	100	94.066	Chlorocebus_sabaeus
ENSSSCG00000026498	R3HDM2	75	91.781	ENSCHOG00000005636	R3HDM2	87	92.704	Choloepus_hoffmanni
ENSSSCG00000026498	R3HDM2	99	80.788	ENSCPBG00000013922	R3HDM2	100	79.364	Chrysemys_picta_bellii
ENSSSCG00000026498	R3HDM2	100	97.773	ENSCANG00000043807	R3HDM2	100	97.773	Colobus_angolensis_palliatus
ENSSSCG00000026498	R3HDM2	100	93.958	ENSCGRG00001017324	R3hdm2	100	93.958	Cricetulus_griseus_chok1gshd
ENSSSCG00000026498	R3HDM2	100	93.265	ENSCGRG00000003862	R3hdm2	100	92.135	Cricetulus_griseus_crigri
ENSSSCG00000026498	R3HDM2	100	66.920	ENSCSEG00000010925	r3hdm2	100	68.042	Cynoglossus_semilaevis
ENSSSCG00000026498	R3HDM2	100	64.929	ENSCVAG00000009058	r3hdm2	100	66.191	Cyprinodon_variegatus
ENSSSCG00000026498	R3HDM2	100	60.826	ENSDARG00000102610	r3hdm2	99	65.815	Danio_rerio
ENSSSCG00000026498	R3HDM2	100	95.805	ENSDNOG00000015033	R3HDM2	100	96.176	Dasypus_novemcinctus
ENSSSCG00000026498	R3HDM2	100	89.437	ENSDORG00000011462	R3hdm2	99	94.553	Dipodomys_ordii
ENSSSCG00000026498	R3HDM2	100	97.278	ENSEASG00005007091	R3HDM2	100	97.278	Equus_asinus_asinus
ENSSSCG00000026498	R3HDM2	100	97.874	ENSECAG00000003157	R3HDM2	100	97.874	Equus_caballus
ENSSSCG00000026498	R3HDM2	100	64.332	ENSELUG00000015969	r3hdm2	100	64.236	Esox_lucius
ENSSSCG00000026498	R3HDM2	100	97.826	ENSFCAG00000000192	R3HDM2	100	96.691	Felis_catus
ENSSSCG00000026498	R3HDM2	90	80.645	ENSFALG00000000255	R3HDM2	100	73.274	Ficedula_albicollis
ENSSSCG00000026498	R3HDM2	100	94.077	ENSFDAG00000019385	R3HDM2	100	94.774	Fukomys_damarensis
ENSSSCG00000026498	R3HDM2	50	38.565	ENSFHEG00000007936	-	62	38.117	Fundulus_heteroclitus
ENSSSCG00000026498	R3HDM2	100	63.558	ENSFHEG00000016484	r3hdm2	99	64.569	Fundulus_heteroclitus
ENSSSCG00000026498	R3HDM2	100	64.516	ENSGMOG00000007961	r3hdm2	95	66.309	Gadus_morhua
ENSSSCG00000026498	R3HDM2	100	79.863	ENSGALG00000043736	R3HDM2	100	77.567	Gallus_gallus
ENSSSCG00000026498	R3HDM2	100	66.812	ENSGAFG00000013887	r3hdm2	100	66.311	Gambusia_affinis
ENSSSCG00000026498	R3HDM2	63	35.702	ENSGAFG00000015558	-	74	34.813	Gambusia_affinis
ENSSSCG00000026498	R3HDM2	100	68.111	ENSGACG00000006442	r3hdm2	100	65.779	Gasterosteus_aculeatus
ENSSSCG00000026498	R3HDM2	100	80.765	ENSGAGG00000017797	R3HDM2	100	80.765	Gopherus_agassizii
ENSSSCG00000026498	R3HDM2	100	97.576	ENSGGOG00000015007	R3HDM2	100	97.576	Gorilla_gorilla
ENSSSCG00000026498	R3HDM2	66	33.833	ENSHBUG00000018525	-	76	33.833	Haplochromis_burtoni
ENSSSCG00000026498	R3HDM2	99	82.048	ENSHGLG00000010421	-	97	87.443	Heterocephalus_glaber_female
ENSSSCG00000026498	R3HDM2	100	95.200	ENSHGLG00000010434	-	100	92.843	Heterocephalus_glaber_female
ENSSSCG00000026498	R3HDM2	96	83.787	ENSHGLG00100018871	-	99	84.194	Heterocephalus_glaber_male
ENSSSCG00000026498	R3HDM2	100	95.086	ENSHGLG00100004183	-	100	94.657	Heterocephalus_glaber_male
ENSSSCG00000026498	R3HDM2	100	63.094	ENSHCOG00000001142	r3hdm2	96	65.243	Hippocampus_comes
ENSSSCG00000026498	R3HDM2	100	61.739	ENSIPUG00000023873	r3hdm2	96	63.372	Ictalurus_punctatus
ENSSSCG00000026498	R3HDM2	100	92.402	ENSSTOG00000013424	R3HDM2	100	93.943	Ictidomys_tridecemlineatus
ENSSSCG00000026498	R3HDM2	100	95.189	ENSJJAG00000010001	R3hdm2	100	93.648	Jaculus_jaculus
ENSSSCG00000026498	R3HDM2	100	66.485	ENSKMAG00000012695	r3hdm2	99	68.215	Kryptolebias_marmoratus
ENSSSCG00000026498	R3HDM2	100	66.739	ENSLBEG00000013115	r3hdm2	92	65.575	Labrus_bergylta
ENSSSCG00000026498	R3HDM2	100	72.146	ENSLACG00000019064	r3hdm2	100	69.021	Latimeria_chalumnae
ENSSSCG00000026498	R3HDM2	100	71.288	ENSLOCG00000005976	r3hdm2	100	71.135	Lepisosteus_oculatus
ENSSSCG00000026498	R3HDM2	100	94.857	ENSLAFG00000006510	R3HDM2	100	90.134	Loxodonta_africana
ENSSSCG00000026498	R3HDM2	100	97.578	ENSMFAG00000036385	R3HDM2	100	97.578	Macaca_fascicularis
ENSSSCG00000026498	R3HDM2	100	97.578	ENSMMUG00000021789	R3HDM2	100	97.578	Macaca_mulatta
ENSSSCG00000026498	R3HDM2	100	97.480	ENSMNEG00000025314	R3HDM2	100	97.480	Macaca_nemestrina
ENSSSCG00000026498	R3HDM2	100	97.677	ENSMLEG00000028915	R3HDM2	100	97.677	Mandrillus_leucophaeus
ENSSSCG00000026498	R3HDM2	100	65.838	ENSMAMG00000009793	r3hdm2	99	63.318	Mastacembelus_armatus
ENSSSCG00000026498	R3HDM2	100	66.558	ENSMZEG00005007319	r3hdm2	96	66.304	Maylandia_zebra
ENSSSCG00000026498	R3HDM2	100	96.985	ENSMICG00000012389	R3HDM2	100	96.985	Microcebus_murinus
ENSSSCG00000026498	R3HDM2	100	94.737	ENSMOCG00000014425	R3hdm2	100	94.349	Microtus_ochrogaster
ENSSSCG00000026498	R3HDM2	100	61.738	ENSMMOG00000007448	r3hdm2	99	66.738	Mola_mola
ENSSSCG00000026498	R3HDM2	94	63.617	ENSMALG00000010211	r3hdm2	98	61.921	Monopterus_albus
ENSSSCG00000026498	R3HDM2	100	94.977	MGP_CAROLIEiJ_G0015896	R3hdm2	100	94.562	Mus_caroli
ENSSSCG00000026498	R3HDM2	100	95.200	ENSMUSG00000025404	R3hdm2	100	94.859	Mus_musculus
ENSSSCG00000026498	R3HDM2	100	94.037	MGP_PahariEiJ_G0031189	R3hdm2	100	94.944	Mus_pahari
ENSSSCG00000026498	R3HDM2	100	94.755	MGP_SPRETEiJ_G0016722	R3hdm2	100	94.467	Mus_spretus
ENSSSCG00000026498	R3HDM2	97	96.941	ENSMPUG00000001818	R3HDM2	97	92.263	Mustela_putorius_furo
ENSSSCG00000026498	R3HDM2	100	96.449	ENSMLUG00000004980	R3HDM2	100	91.843	Myotis_lucifugus
ENSSSCG00000026498	R3HDM2	100	96.556	ENSNGAG00000018800	R3hdm2	100	96.255	Nannospalax_galili
ENSSSCG00000026498	R3HDM2	94	67.896	ENSNBRG00000004483	r3hdm2	99	68.069	Neolamprologus_brichardi
ENSSSCG00000026498	R3HDM2	100	97.674	ENSNLEG00000017351	R3HDM2	100	97.674	Nomascus_leucogenys
ENSSSCG00000026498	R3HDM2	100	83.638	ENSMEUG00000008588	R3HDM2	100	80.902	Notamacropus_eugenii
ENSSSCG00000026498	R3HDM2	100	87.206	ENSOPRG00000013670	R3HDM2	100	87.206	Ochotona_princeps
ENSSSCG00000026498	R3HDM2	99	67.228	ENSONIG00000005075	r3hdm2	96	69.160	Oreochromis_niloticus
ENSSSCG00000026498	R3HDM2	100	95.563	ENSOCUG00000013258	R3HDM2	100	91.031	Oryctolagus_cuniculus
ENSSSCG00000026498	R3HDM2	100	65.284	ENSORLG00000005502	r3hdm2	99	62.015	Oryzias_latipes
ENSSSCG00000026498	R3HDM2	100	65.284	ENSORLG00020017069	r3hdm2	99	63.966	Oryzias_latipes_hni
ENSSSCG00000026498	R3HDM2	100	65.393	ENSORLG00015012735	r3hdm2	99	64.061	Oryzias_latipes_hsok
ENSSSCG00000026498	R3HDM2	99	61.538	ENSOMEG00000018079	r3hdm2	99	62.184	Oryzias_melastigma
ENSSSCG00000026498	R3HDM2	100	92.686	ENSOGAG00000012055	R3HDM2	100	91.798	Otolemur_garnettii
ENSSSCG00000026498	R3HDM2	98	82.286	ENSOGAG00000027966	-	99	83.474	Otolemur_garnettii
ENSSSCG00000026498	R3HDM2	100	97.275	ENSOARG00000006929	R3HDM2	100	97.275	Ovis_aries
ENSSSCG00000026498	R3HDM2	100	97.778	ENSPPAG00000034395	R3HDM2	100	97.778	Pan_paniscus
ENSSSCG00000026498	R3HDM2	100	97.578	ENSPPRG00000009240	R3HDM2	100	97.578	Panthera_pardus
ENSSSCG00000026498	R3HDM2	100	97.578	ENSPTIG00000008752	R3HDM2	100	97.578	Panthera_tigris_altaica
ENSSSCG00000026498	R3HDM2	100	97.679	ENSPTRG00000046457	R3HDM2	100	97.679	Pan_troglodytes
ENSSSCG00000026498	R3HDM2	98	96.399	ENSPANG00000024002	R3HDM2	100	96.399	Papio_anubis
ENSSSCG00000026498	R3HDM2	100	66.370	ENSPKIG00000003171	r3hdm2	97	67.345	Paramormyrops_kingsleyae
ENSSSCG00000026498	R3HDM2	65	72.111	ENSPSIG00000006954	R3HDM2	100	73.543	Pelodiscus_sinensis
ENSSSCG00000026498	R3HDM2	100	64.825	ENSPMGG00000007061	r3hdm2	99	69.626	Periophthalmus_magnuspinnatus
ENSSSCG00000026498	R3HDM2	100	93.636	ENSPEMG00000015964	R3hdm2	100	93.636	Peromyscus_maniculatus_bairdii
ENSSSCG00000026498	R3HDM2	100	91.423	ENSPCIG00000023841	R3HDM2	100	90.817	Phascolarctos_cinereus
ENSSSCG00000026498	R3HDM2	94	71.316	ENSPFOG00000006077	r3hdm2	98	73.158	Poecilia_formosa
ENSSSCG00000026498	R3HDM2	100	64.558	ENSPLAG00000002971	r3hdm2	99	66.170	Poecilia_latipinna
ENSSSCG00000026498	R3HDM2	100	64.558	ENSPMEG00000005330	r3hdm2	99	66.170	Poecilia_mexicana
ENSSSCG00000026498	R3HDM2	100	65.976	ENSPREG00000008424	r3hdm2	100	64.681	Poecilia_reticulata
ENSSSCG00000026498	R3HDM2	99	91.194	ENSPPYG00000004685	R3HDM2	81	92.083	Pongo_abelii
ENSSSCG00000026498	R3HDM2	100	85.682	ENSPCAG00000014642	R3HDM2	91	95.455	Procavia_capensis
ENSSSCG00000026498	R3HDM2	100	97.175	ENSPCOG00000013201	R3HDM2	100	97.175	Propithecus_coquereli
ENSSSCG00000026498	R3HDM2	100	97.933	ENSPVAG00000003967	R3HDM2	100	92.981	Pteropus_vampyrus
ENSSSCG00000026498	R3HDM2	100	60.599	ENSPNYG00000013479	r3hdm2	100	65.800	Pundamilia_nyererei
ENSSSCG00000026498	R3HDM2	100	63.965	ENSPNAG00000017473	r3hdm2	96	64.782	Pygocentrus_nattereri
ENSSSCG00000026498	R3HDM2	100	94.064	ENSRNOG00000007801	R3hdm2	100	93.756	Rattus_norvegicus
ENSSSCG00000026498	R3HDM2	100	94.944	ENSRBIG00000037403	R3HDM2	100	94.641	Rhinopithecus_bieti
ENSSSCG00000026498	R3HDM2	100	97.674	ENSRROG00000022271	R3HDM2	100	97.674	Rhinopithecus_roxellana
ENSSSCG00000026498	R3HDM2	100	97.976	ENSSBOG00000023547	R3HDM2	100	97.976	Saimiri_boliviensis_boliviensis
ENSSSCG00000026498	R3HDM2	100	87.001	ENSSHAG00000003511	R3HDM2	99	91.800	Sarcophilus_harrisii
ENSSSCG00000026498	R3HDM2	94	70.913	ENSSFOG00015011219	r3hdm2	99	69.102	Scleropages_formosus
ENSSSCG00000026498	R3HDM2	100	65.419	ENSSMAG00000012073	r3hdm2	100	68.113	Scophthalmus_maximus
ENSSSCG00000026498	R3HDM2	100	65.761	ENSSDUG00000019269	r3hdm2	100	67.927	Seriola_dumerili
ENSSSCG00000026498	R3HDM2	64	36.058	ENSSDUG00000009188	-	92	34.314	Seriola_dumerili
ENSSSCG00000026498	R3HDM2	100	67.320	ENSSLDG00000005252	r3hdm2	100	68.398	Seriola_lalandi_dorsalis
ENSSSCG00000026498	R3HDM2	93	90.406	ENSSARG00000003958	R3HDM2	94	90.406	Sorex_araneus
ENSSSCG00000026498	R3HDM2	100	79.240	ENSSPUG00000014132	R3HDM2	100	79.045	Sphenodon_punctatus
ENSSSCG00000026498	R3HDM2	63	35.052	ENSSPAG00000016856	-	76	34.459	Stegastes_partitus
ENSSSCG00000026498	R3HDM2	100	65.543	ENSSPAG00000022594	r3hdm2	100	69.527	Stegastes_partitus
ENSSSCG00000026498	R3HDM2	73	77.618	ENSTGUG00000015881	R3HDM2	100	77.457	Taeniopygia_guttata
ENSSSCG00000026498	R3HDM2	94	65.885	ENSTRUG00000015075	r3hdm2	99	66.702	Takifugu_rubripes
ENSSSCG00000026498	R3HDM2	92	85.652	ENSTNIG00000007057	r3hdm2	84	82.759	Tetraodon_nigroviridis
ENSSSCG00000026498	R3HDM2	80	96.416	ENSTBEG00000015967	R3HDM2	81	96.416	Tupaia_belangeri
ENSSSCG00000026498	R3HDM2	100	82.090	ENSTTRG00000013082	R3HDM2	100	78.044	Tursiops_truncatus
ENSSSCG00000026498	R3HDM2	100	97.881	ENSUAMG00000020913	R3HDM2	100	94.634	Ursus_americanus
ENSSSCG00000026498	R3HDM2	100	95.672	ENSUMAG00000019179	R3HDM2	100	92.246	Ursus_maritimus
ENSSSCG00000026498	R3HDM2	100	90.378	ENSVPAG00000008656	R3HDM2	100	86.564	Vicugna_pacos
ENSSSCG00000026498	R3HDM2	98	97.193	ENSVVUG00000018014	R3HDM2	97	94.135	Vulpes_vulpes
ENSSSCG00000026498	R3HDM2	100	74.044	ENSXETG00000017153	r3hdm2	100	73.193	Xenopus_tropicalis
ENSSSCG00000026498	R3HDM2	100	58.617	ENSXCOG00000013882	r3hdm2	100	65.780	Xiphophorus_couchianus
ENSSSCG00000026498	R3HDM2	100	65.976	ENSXMAG00000017978	r3hdm2	100	66.012	Xiphophorus_maculatus
ENSSSCG00000026498	R3HDM2	62	36.349	ENSXMAG00000002994	-	74	34.813	Xiphophorus_maculatus