EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000026700 (Gene tree)
Gene ID: 100622208
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 15726 bases
Position: chr7:76120871-76136596
Accession: 100622208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035936	RRM_1	PF00076.22	5.4e-35	1	2
ENSSSCP00000035936	RRM_1	PF00076.22	5.4e-35	2	2
ENSSSCP00000026075	RRM_1	PF00076.22	6e-35	1	2
ENSSSCP00000026075	RRM_1	PF00076.22	6e-35	2	2
ENSSSCP00000040444	RRM_1	PF00076.22	6e-35	1	2
ENSSSCP00000040444	RRM_1	PF00076.22	6e-35	2	2
ENSSSCP00000055139	RRM_1	PF00076.22	6e-35	1	2
ENSSSCP00000055139	RRM_1	PF00076.22	6e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000058266	RBM23-201	7000	XM_021099253	ENSSSCP00000055139	445 (aa)	XP_020954912	I3LPP8
ENSSSCT00000022566	RBM23-204	2505	XM_021099259	ENSSSCP00000026075	445 (aa)	XP_020954918	I3LPP8
ENSSSCT00000063480	RBM23-202	2606	XM_021099250	ENSSSCP00000040444	445 (aa)	XP_020954909	I3LPP8
ENSSSCT00000057444	RBM23-203	6990	XM_021099252	ENSSSCP00000035936	429 (aa)	XP_020954911	A0A286ZWE1

Gene Model

Click here to download ENSSSCG00000026700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000026700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000026700	RBM23	98	58.957	ENSSSCG00000007309	RBM39	81	57.709
ENSSSCG00000026700	RBM23	50	31.624	ENSSSCG00000010685	-	79	31.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000026700	RBM23	100	90.069	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSSSCG00000026700	RBM23	100	87.417	ENSAMEG00000007322	RBM23	100	83.664	Ailuropoda_melanoleuca
ENSSSCG00000026700	RBM23	100	71.806	ENSACAG00000001569	RBM23	96	72.467	Anolis_carolinensis
ENSSSCG00000026700	RBM23	100	69.663	ENSANAG00000033790	-	100	67.865	Aotus_nancymaae
ENSSSCG00000026700	RBM23	100	86.882	ENSBTAG00000038333	RBM23	100	83.656	Bos_taurus
ENSSSCG00000026700	RBM23	100	85.135	ENSCJAG00000008482	RBM23	100	84.410	Callithrix_jacchus
ENSSSCG00000026700	RBM23	100	80.870	ENSCAFG00000011217	RBM23	100	79.348	Canis_familiaris
ENSSSCG00000026700	RBM23	100	87.082	ENSCAFG00020007711	RBM23	100	85.523	Canis_lupus_dingo
ENSSSCG00000026700	RBM23	100	88.817	ENSCHIG00000025709	RBM23	100	84.516	Capra_hircus
ENSSSCG00000026700	RBM23	100	87.444	ENSTSYG00000014755	RBM23	100	96.324	Carlito_syrichta
ENSSSCG00000026700	RBM23	100	90.741	ENSCCAG00000025114	-	100	87.963	Cebus_capucinus
ENSSSCG00000026700	RBM23	100	75.561	ENSCCAG00000028584	-	100	80.443	Cebus_capucinus
ENSSSCG00000026700	RBM23	100	89.755	ENSCATG00000017832	RBM23	100	91.786	Cercocebus_atys
ENSSSCG00000026700	RBM23	100	87.805	ENSCSAG00000016213	RBM23	100	84.479	Chlorocebus_sabaeus
ENSSSCG00000026700	RBM23	100	69.697	ENSCPBG00000026096	RBM23	96	70.112	Chrysemys_picta_bellii
ENSSSCG00000026700	RBM23	78	94.135	ENSCANG00000001893	RBM23	79	93.789	Colobus_angolensis_palliatus
ENSSSCG00000026700	RBM23	100	87.220	ENSDNOG00000032457	RBM23	100	82.511	Dasypus_novemcinctus
ENSSSCG00000026700	RBM23	63	94.161	ENSDORG00000004926	-	100	92.701	Dipodomys_ordii
ENSSSCG00000026700	RBM23	53	77.949	ENSETEG00000017915	-	89	78.723	Echinops_telfairi
ENSSSCG00000026700	RBM23	96	89.327	ENSEASG00005011696	RBM23	95	87.703	Equus_asinus_asinus
ENSSSCG00000026700	RBM23	100	87.586	ENSECAG00000009910	RBM23	100	79.258	Equus_caballus
ENSSSCG00000026700	RBM23	100	82.589	ENSEEUG00000015560	RBM23	100	83.929	Erinaceus_europaeus
ENSSSCG00000026700	RBM23	100	89.485	ENSFCAG00000006632	RBM23	100	85.078	Felis_catus
ENSSSCG00000026700	RBM23	100	88.591	ENSGGOG00000015707	RBM23	100	85.459	Gorilla_gorilla
ENSSSCG00000026700	RBM23	100	80.942	ENSHGLG00100006114	RBM23	99	80.045	Heterocephalus_glaber_male
ENSSSCG00000026700	RBM23	63	95.238	ENSSTOG00000010354	RBM23	100	95.238	Ictidomys_tridecemlineatus
ENSSSCG00000026700	RBM23	100	86.605	ENSLAFG00000018567	RBM23	100	82.910	Loxodonta_africana
ENSSSCG00000026700	RBM23	100	89.800	ENSMFAG00000037595	RBM23	100	86.475	Macaca_fascicularis
ENSSSCG00000026700	RBM23	100	89.579	ENSMMUG00000018381	RBM23	100	85.556	Macaca_mulatta
ENSSSCG00000026700	RBM23	100	90.179	ENSMNEG00000042442	RBM23	100	86.830	Macaca_nemestrina
ENSSSCG00000026700	RBM23	100	86.041	ENSMLEG00000039954	RBM23	100	76.419	Mandrillus_leucophaeus
ENSSSCG00000026700	RBM23	100	88.140	ENSMICG00000006364	RBM23	100	94.834	Microcebus_murinus
ENSSSCG00000026700	RBM23	100	82.080	ENSMODG00000024448	RBM23	100	84.071	Monodelphis_domestica
ENSSSCG00000026700	RBM23	100	87.333	ENSMPUG00000007151	RBM23	100	85.111	Mustela_putorius_furo
ENSSSCG00000026700	RBM23	100	79.372	ENSMLUG00000012923	RBM23	100	78.795	Myotis_lucifugus
ENSSSCG00000026700	RBM23	100	90.265	ENSNLEG00000014792	RBM23	100	86.504	Nomascus_leucogenys
ENSSSCG00000026700	RBM23	55	97.080	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSSSCG00000026700	RBM23	74	90.282	ENSOPRG00000001092	RBM23	100	80.269	Ochotona_princeps
ENSSSCG00000026700	RBM23	71	45.963	ENSOANG00000008908	-	100	51.863	Ornithorhynchus_anatinus
ENSSSCG00000026700	RBM23	73	93.968	ENSOCUG00000002006	RBM23	100	84.564	Oryctolagus_cuniculus
ENSSSCG00000026700	RBM23	99	78.913	ENSOGAG00000014794	RBM23	100	77.707	Otolemur_garnettii
ENSSSCG00000026700	RBM23	100	87.742	ENSOARG00000019398	RBM23	100	83.441	Ovis_aries
ENSSSCG00000026700	RBM23	100	89.381	ENSPPAG00000037922	RBM23	100	85.177	Pan_paniscus
ENSSSCG00000026700	RBM23	73	95.899	ENSPPRG00000023344	RBM23	100	85.301	Panthera_pardus
ENSSSCG00000026700	RBM23	100	76.852	ENSPTIG00000007831	RBM23	100	83.964	Panthera_tigris_altaica
ENSSSCG00000026700	RBM23	100	87.832	ENSPTRG00000006151	RBM23	100	83.628	Pan_troglodytes
ENSSSCG00000026700	RBM23	95	88.434	ENSPANG00000001324	RBM23	100	93.141	Papio_anubis
ENSSSCG00000026700	RBM23	73	94.569	ENSPCIG00000027773	RBM23	100	83.333	Phascolarctos_cinereus
ENSSSCG00000026700	RBM23	100	87.991	ENSPPYG00000005649	RBM23	100	77.802	Pongo_abelii
ENSSSCG00000026700	RBM23	100	69.213	ENSPCAG00000006669	RBM23	100	68.315	Procavia_capensis
ENSSSCG00000026700	RBM23	100	90.023	ENSPCOG00000018564	RBM23	100	95.588	Propithecus_coquereli
ENSSSCG00000026700	RBM23	100	88.143	ENSPVAG00000013785	RBM23	100	86.801	Pteropus_vampyrus
ENSSSCG00000026700	RBM23	100	89.135	ENSRBIG00000039276	RBM23	100	86.031	Rhinopithecus_bieti
ENSSSCG00000026700	RBM23	100	89.135	ENSRROG00000044026	RBM23	100	86.031	Rhinopithecus_roxellana
ENSSSCG00000026700	RBM23	100	89.667	ENSSBOG00000023037	-	100	87.667	Saimiri_boliviensis_boliviensis
ENSSSCG00000026700	RBM23	96	68.998	ENSSBOG00000034977	-	100	62.615	Saimiri_boliviensis_boliviensis
ENSSSCG00000026700	RBM23	73	94.569	ENSSHAG00000012932	RBM23	100	86.813	Sarcophilus_harrisii
ENSSSCG00000026700	RBM23	100	86.031	ENSSARG00000005165	RBM23	100	85.588	Sorex_araneus
ENSSSCG00000026700	RBM23	74	82.609	ENSSPUG00000000489	RBM23	96	69.248	Sphenodon_punctatus
ENSSSCG00000026700	RBM23	100	79.075	ENSTBEG00000011543	RBM23	100	79.560	Tupaia_belangeri
ENSSSCG00000026700	RBM23	100	88.341	ENSTTRG00000001500	RBM23	100	87.892	Tursiops_truncatus
ENSSSCG00000026700	RBM23	100	87.528	ENSUAMG00000008524	RBM23	100	84.410	Ursus_americanus
ENSSSCG00000026700	RBM23	100	87.528	ENSUMAG00000014075	RBM23	100	84.410	Ursus_maritimus
ENSSSCG00000026700	RBM23	100	87.528	ENSVVUG00000019815	RBM23	100	85.969	Vulpes_vulpes
ENSSSCG00000026700	RBM23	70	76.568	ENSXETG00000022623	rbm23	100	65.632	Xenopus_tropicalis