EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000027196 (Gene tree)
Gene ID
100518524
Gene Symbol
-
Alias
-
Full Name
GTPase%2C IMAP family member 6
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
19464 bases
Position
chr18:6405275-6424738
Accession
100518524
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000045520MMR_HSR1PF01926.232.1e-0611
ENSSSCP00000041293MMR_HSR1PF01926.232.2e-0611
ENSSSCP00000053844MMR_HSR1PF01926.232.5e-0611
ENSSSCP00000027667MMR_HSR1PF01926.232.6e-0611
ENSSSCP00000055564MMR_HSR1PF01926.232.7e-0611
ENSSSCP00000040285MMR_HSR1PF01926.234e-0611
ENSSSCP00000036078MMR_HSR1PF01926.231.3e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000048683-1994XM_003360078ENSSSCP00000045520289 (aa)XP_003360126A0A287ANP5
ENSSSCT00000062610-756-ENSSSCP00000053844251 (aa)-A0A287BBD5
ENSSSCT00000031757-1930XM_021079232ENSSSCP00000027667261 (aa)XP_020934891I3LU68
ENSSSCT00000060164-1839-ENSSSCP00000041293242 (aa)-A0A287ABA4
ENSSSCT00000039601-999-ENSSSCP00000040285319 (aa)-A0A287A8Z3
ENSSSCT00000050689-1752-ENSSSCP00000036078256 (aa)-A0A286ZWT5
ENSSSCT00000057323-774-ENSSSCP00000055564257 (aa)-A0A287BHF9
Gene Model
Click here to download ENSSSCG00000027196's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027196's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000027196-8045.408ENSSSCG00000031897-6745.320
ENSSSCG00000027196-8050.000ENSSSCG00000016449GIMAP25650.000
ENSSSCG00000027196-8047.423ENSSSCG00000039407-6347.423
ENSSSCG00000027196-8937.500ENSSSCG00000027826-6837.500
ENSSSCG00000027196-8143.158ENSSSCG00000016452GIMAP88343.299
ENSSSCG00000027196-6332.544ENSSSCG00000039563GIMD16832.544
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000027196-9670.386ENSG00000133561GIMAP67970.386Homo_sapiens
ENSSSCG00000027196-9766.667ENSAMEG00000009802-8362.414Ailuropoda_melanoleuca
ENSSSCG00000027196-9666.116ENSANAG00000036674GIMAP68066.116Aotus_nancymaae
ENSSSCG00000027196-9659.574ENSBTAG00000050052-8259.574Bos_taurus
ENSSSCG00000027196-8569.903ENSCJAG00000020121GIMAP65769.903Callithrix_jacchus
ENSSSCG00000027196-9357.407ENSCAFG00000024858-8758.148Canis_familiaris
ENSSSCG00000027196-10058.763ENSCAFG00020006496-8059.450Canis_lupus_dingo
ENSSSCG00000027196-9963.103ENSCHIG00000012346-8562.414Capra_hircus
ENSSSCG00000027196-9570.563ENSCHIG00000019058-8266.418Capra_hircus
ENSSSCG00000027196-9566.667ENSCHIG00000026449-8066.667Capra_hircus
ENSSSCG00000027196-9668.966ENSTSYG00000031555GIMAP67968.966Carlito_syrichta
ENSSSCG00000027196-9161.991ENSCPOG00000040378-9154.514Cavia_porcellus
ENSSSCG00000027196-9668.670ENSCCAG00000034011GIMAP67968.670Cebus_capucinus
ENSSSCG00000027196-9970.417ENSCATG00000038067GIMAP67470.417Cercocebus_atys
ENSSSCG00000027196-8469.118ENSCLAG00000001242-8958.779Chinchilla_lanigera
ENSSSCG00000027196-9671.245ENSCSAG00000006876GIMAP66671.245Chlorocebus_sabaeus
ENSSSCG00000027196-8572.816ENSCANG00000029314GIMAP65772.816Colobus_angolensis_palliatus
ENSSSCG00000027196-10059.091ENSCGRG00001023782Gimap69355.017Cricetulus_griseus_chok1gshd
ENSSSCG00000027196-10059.091ENSCGRG00000014388Gimap69355.017Cricetulus_griseus_crigri
ENSSSCG00000027196-6351.235ENSDORG00000023560-9851.235Dipodomys_ordii
ENSSSCG00000027196-8677.778ENSEASG00005007023GIMAP67877.778Equus_asinus_asinus
ENSSSCG00000027196-9872.574ENSECAG00000003981GIMAP68366.667Equus_caballus
ENSSSCG00000027196-5776.562ENSEEUG00000007095-5476.562Erinaceus_europaeus
ENSSSCG00000027196-9662.979ENSFCAG00000041878GIMAP67964.681Felis_catus
ENSSSCG00000027196-8465.196ENSFDAG00000013097-7664.734Fukomys_damarensis
ENSSSCG00000027196-9670.386ENSGGOG00000000613-7970.386Gorilla_gorilla
ENSSSCG00000027196-8869.811ENSHGLG00000012994GIMAP68357.439Heterocephalus_glaber_female
ENSSSCG00000027196-8869.811ENSHGLG00100004910GIMAP68357.439Heterocephalus_glaber_male
ENSSSCG00000027196-9671.245ENSMFAG00000043478GIMAP67971.245Macaca_fascicularis
ENSSSCG00000027196-9670.815ENSMMUG00000047276GIMAP67970.815Macaca_mulatta
ENSSSCG00000027196-9969.583ENSMNEG00000029719GIMAP67970.815Macaca_nemestrina
ENSSSCG00000027196-8573.301ENSMLEG00000029734GIMAP65773.301Mandrillus_leucophaeus
ENSSSCG00000027196-9957.261ENSMAUG00000011214Gimap69251.408Mesocricetus_auratus
ENSSSCG00000027196-9659.350ENSMICG00000033278-8160.163Microcebus_murinus
ENSSSCG00000027196-8562.802ENSMOCG00000018308Gimap67162.802Microtus_ochrogaster
ENSSSCG00000027196-8358.209ENSMODG00000029183-5658.209Monodelphis_domestica
ENSSSCG00000027196-9754.074MGP_CAROLIEiJ_G0028350Gimap68854.074Mus_caroli
ENSSSCG00000027196-8662.679ENSMUSG00000047867Gimap67559.740Mus_musculus
ENSSSCG00000027196-9558.874MGP_SPRETEiJ_G0029353Gimap67558.874Mus_spretus
ENSSSCG00000027196-9668.670ENSMLUG00000010888GIMAP68068.670Myotis_lucifugus
ENSSSCG00000027196-9562.771ENSNGAG00000009129Gimap68656.604Nannospalax_galili
ENSSSCG00000027196-8361.692ENSMEUG00000003871-8261.692Notamacropus_eugenii
ENSSSCG00000027196-9667.811ENSOCUG00000023856-7767.811Oryctolagus_cuniculus
ENSSSCG00000027196-9666.953ENSOCUG00000026993-7666.953Oryctolagus_cuniculus
ENSSSCG00000027196-8961.111ENSOGAG00000029466-7959.914Otolemur_garnettii
ENSSSCG00000027196-9962.671ENSOARG00000001356-8562.671Ovis_aries
ENSSSCG00000027196-9670.386ENSPPAG00000033178GIMAP67970.386Pan_paniscus
ENSSSCG00000027196-8571.845ENSPTRG00000019860GIMAP65771.845Pan_troglodytes
ENSSSCG00000027196-9670.386ENSPTRG00000045753-7970.386Pan_troglodytes
ENSSSCG00000027196-9970.417ENSPANG00000032121GIMAP67971.674Papio_anubis
ENSSSCG00000027196-9559.307ENSPEMG00000011262Gimap69053.597Peromyscus_maniculatus_bairdii
ENSSSCG00000027196-8839.556ENSPCIG00000016010-6640.183Phascolarctos_cinereus
ENSSSCG00000027196-9670.386ENSPPYG00000029783-7970.386Pongo_abelii
ENSSSCG00000027196-9563.043ENSPCOG00000027875-9863.043Propithecus_coquereli
ENSSSCG00000027196-9561.039ENSRNOG00000033338Gimap69652.843Rattus_norvegicus
ENSSSCG00000027196-9970.417ENSRBIG00000031547GIMAP67971.674Rhinopithecus_bieti
ENSSSCG00000027196-9671.674ENSRROG00000045462GIMAP67971.674Rhinopithecus_roxellana
ENSSSCG00000027196-9666.953ENSSBOG00000022715GIMAP67966.953Saimiri_boliviensis_boliviensis
ENSSSCG00000027196-8163.452ENSSHAG00000000570-7463.452Sarcophilus_harrisii
ENSSSCG00000027196-8362.000ENSSARG00000011388-7762.000Sorex_araneus
ENSSSCG00000027196-9659.052ENSSARG00000000290-7959.052Sorex_araneus
ENSSSCG00000027196-8475.369ENSTTRG00000017002-6175.000Tursiops_truncatus
ENSSSCG00000027196-8269.697ENSUAMG00000002021-7069.000Ursus_americanus
ENSSSCG00000027196-9957.143ENSUAMG00000005395-9557.143Ursus_americanus
ENSSSCG00000027196-9957.143ENSUAMG00000003158-9557.143Ursus_americanus
ENSSSCG00000027196-8269.697ENSUAMG00000004052-7069.000Ursus_americanus
ENSSSCG00000027196-8269.192ENSUAMG00000000534-7068.500Ursus_americanus
ENSSSCG00000027196-6972.289ENSUMAG00000000464-8669.492Ursus_maritimus
ENSSSCG00000027196-9259.551ENSVVUG00000009155-6659.925Vulpes_vulpes

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