EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000027351 (Gene tree)
Gene ID: 100620238
Gene Symbol: ZNF454
Alias: FLJ37444
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23401 bases
Position: chr2:79492281-79515681
Accession: 100620238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	1	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	2	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	3	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	4	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	5	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	6	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	7	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	8	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	9	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	10	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	11	12
ENSSSCP00000022620	zf-C2H2	PF00096.26	1.1e-66	12	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	1	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	2	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	3	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	4	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	5	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	6	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	7	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	8	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	9	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	10	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	11	12
ENSSSCP00000050518	zf-C2H2	PF00096.26	1.1e-66	12	12
ENSSSCP00000022620	zf-met	PF12874.7	0.00038	1	1
ENSSSCP00000050518	zf-met	PF12874.7	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051858	ZNF454-202	3549	XM_021084338	ENSSSCP00000050518	527 (aa)	XP_020939997	I3LEY1
ENSSSCT00000030072	ZNF454-201	3320	XM_003480856	ENSSSCP00000022620	527 (aa)	XP_003480904	I3LEY1

Gene Model

Click here to download ENSSSCG00000027351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000027351	ZNF454	99	54.133	ENSSSCG00000040389	-	99	57.184
ENSSSCG00000027351	ZNF454	98	42.476	ENSSSCG00000029347	-	98	49.582
ENSSSCG00000027351	ZNF454	98	53.757	ENSSSCG00000012283	ZNF81	96	53.757
ENSSSCG00000027351	ZNF454	98	44.807	ENSSSCG00000022634	-	94	46.926
ENSSSCG00000027351	ZNF454	99	41.971	ENSSSCG00000032506	ZNF317	95	42.138
ENSSSCG00000027351	ZNF454	99	58.687	ENSSSCG00000008117	ZNF2	99	58.687
ENSSSCG00000027351	ZNF454	80	50.773	ENSSSCG00000003076	ZNF226	89	52.561
ENSSSCG00000027351	ZNF454	98	49.865	ENSSSCG00000003077	ZNF112	98	49.865
ENSSSCG00000027351	ZNF454	100	45.707	ENSSSCG00000031774	-	100	47.396
ENSSSCG00000027351	ZNF454	98	52.367	ENSSSCG00000035876	ZNF599	97	58.576
ENSSSCG00000027351	ZNF454	100	46.973	ENSSSCG00000038009	-	99	47.917
ENSSSCG00000027351	ZNF454	99	49.875	ENSSSCG00000003070	ZNF45	97	49.875
ENSSSCG00000027351	ZNF454	98	53.521	ENSSSCG00000022434	ZNF235	99	53.521
ENSSSCG00000027351	ZNF454	93	41.469	ENSSSCG00000036608	-	99	41.469
ENSSSCG00000027351	ZNF454	98	48.077	ENSSSCG00000022668	ZFP1	99	48.077
ENSSSCG00000027351	ZNF454	74	51.460	ENSSSCG00000023349	ZNF768	51	50.588
ENSSSCG00000027351	ZNF454	98	55.184	ENSSSCG00000003322	-	91	55.184
ENSSSCG00000027351	ZNF454	99	49.169	ENSSSCG00000027741	-	97	49.169
ENSSSCG00000027351	ZNF454	77	48.322	ENSSSCG00000029696	-	92	48.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027351	ZNF454	77	83.619	ENSCAPG00000006920	-	98	83.619	Cavia_aperea
ENSSSCG00000027351	ZNF454	77	83.863	ENSCPOG00000035563	-	98	83.863	Cavia_porcellus
ENSSSCG00000027351	ZNF454	100	85.769	ENSCATG00000031926	ZNF454	100	85.769	Cercocebus_atys
ENSSSCG00000027351	ZNF454	83	81.422	ENSCLAG00000010195	-	100	81.651	Chinchilla_lanigera
ENSSSCG00000027351	ZNF454	99	76.287	ENSCGRG00001013939	Zfp454	99	76.287	Cricetulus_griseus_chok1gshd
ENSSSCG00000027351	ZNF454	100	76.460	ENSCGRG00000014813	Zfp454	100	76.460	Cricetulus_griseus_crigri
ENSSSCG00000027351	ZNF454	92	89.691	ENSEASG00005012616	ZNF454	100	89.691	Equus_asinus_asinus
ENSSSCG00000027351	ZNF454	98	82.171	ENSEEUG00000007684	ZNF454	100	82.171	Erinaceus_europaeus
ENSSSCG00000027351	ZNF454	100	85.958	ENSMFAG00000043337	ZNF454	100	85.958	Macaca_fascicularis
ENSSSCG00000027351	ZNF454	100	85.958	ENSMMUG00000045647	ZNF454	100	85.958	Macaca_mulatta
ENSSSCG00000027351	ZNF454	100	85.958	ENSMNEG00000002699	ZNF454	100	85.958	Macaca_nemestrina
ENSSSCG00000027351	ZNF454	100	85.958	ENSMLEG00000039955	ZNF454	100	85.958	Mandrillus_leucophaeus
ENSSSCG00000027351	ZNF454	100	75.091	ENSMUSG00000048728	Zfp454	99	80.734	Mus_musculus
ENSSSCG00000027351	ZNF454	98	89.403	ENSMLUG00000002894	ZNF454	100	89.403	Myotis_lucifugus
ENSSSCG00000027351	ZNF454	100	86.148	ENSPANG00000009509	ZNF454	100	86.148	Papio_anubis
ENSSSCG00000027351	ZNF454	84	87.783	ENSUAMG00000026246	ZNF454	100	87.783	Ursus_americanus
ENSSSCG00000027351	ZNF454	90	87.131	ENSUMAG00000023930	ZNF454	94	87.131	Ursus_maritimus
ENSSSCG00000027351	ZNF454	98	86.705	ENSVVUG00000001267	ZNF454	84	86.705	Vulpes_vulpes