EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000027444 (Gene tree)
Gene ID: 100626560
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 99084 bases
Position: chr17:50804026-50903109
Accession: 100626560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052014	dsrm	PF00035.26	4.2e-46	1	4
ENSSSCP00000052014	dsrm	PF00035.26	4.2e-46	2	4
ENSSSCP00000052014	dsrm	PF00035.26	4.2e-46	3	4
ENSSSCP00000052014	dsrm	PF00035.26	4.2e-46	4	4
ENSSSCP00000033939	dsrm	PF00035.26	9.7e-46	1	4
ENSSSCP00000033939	dsrm	PF00035.26	9.7e-46	2	4
ENSSSCP00000033939	dsrm	PF00035.26	9.7e-46	3	4
ENSSSCP00000033939	dsrm	PF00035.26	9.7e-46	4	4
ENSSSCP00000020690	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000020690	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000020690	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000035864	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000035864	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000035864	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000040562	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000040562	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000040562	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000042946	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000042946	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000042946	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000049034	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000049034	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000049034	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000049935	dsrm	PF00035.26	1.1e-33	1	3
ENSSSCP00000049935	dsrm	PF00035.26	1.1e-33	2	3
ENSSSCP00000049935	dsrm	PF00035.26	1.1e-33	3	3
ENSSSCP00000057094	dsrm	PF00035.26	7.9e-33	1	3
ENSSSCP00000057094	dsrm	PF00035.26	7.9e-33	2	3
ENSSSCP00000057094	dsrm	PF00035.26	7.9e-33	3	3
ENSSSCP00000033218	dsrm	PF00035.26	8.5e-33	1	3
ENSSSCP00000033218	dsrm	PF00035.26	8.5e-33	2	3
ENSSSCP00000033218	dsrm	PF00035.26	8.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059677	STAU1-201	4253	-	ENSSSCP00000049935	496 (aa)	-	I3L9H8
ENSSSCT00000043545	STAU1-202	4128	-	ENSSSCP00000042946	496 (aa)	-	I3L9H8
ENSSSCT00000060187	STAU1-207	3340	XM_013983334	ENSSSCP00000049034	496 (aa)	XP_013838788	I3L9H8
ENSSSCT00000052090	STAU1-209	3355	XM_021077495	ENSSSCP00000033939	687 (aa)	XP_020933154	A0A286ZQP6
ENSSSCT00000022958	STAU1-204	3217	XM_021077504	ENSSSCP00000020690	496 (aa)	XP_020933163	I3L9H8
ENSSSCT00000056182	STAU1-206	3548	XM_021077507	ENSSSCP00000040562	496 (aa)	XP_020933166	I3L9H8
ENSSSCT00000037427	STAU1-205	3558	XM_021077499	ENSSSCP00000057094	577 (aa)	XP_020933158	A0A287BM04
ENSSSCT00000057801	STAU1-208	3273	XM_021077501	ENSSSCP00000033218	521 (aa)	XP_020933160	A0A286ZP24
ENSSSCT00000050188	STAU1-210	3217	XM_021077514	ENSSSCP00000035864	496 (aa)	XP_020933173	I3L9H8
ENSSSCT00000046501	STAU1-203	3399	XM_021077498	ENSSSCP00000052014	599 (aa)	XP_020933157	A0A287B676

Gene Model

Click here to download ENSSSCG00000027444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000027444	STAU1	54	31.765	ENSSSCG00000038254	PRKRA	50	32.143
ENSSSCG00000027444	STAU1	96	53.333	ENSSSCG00000006179	-	100	55.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027444	STAU1	100	97.400	ENSG00000124214	STAU1	100	97.400	Homo_sapiens
ENSSSCG00000027444	STAU1	99	74.007	ENSAPOG00000017260	stau1	93	71.269	Acanthochromis_polyacanthus
ENSSSCG00000027444	STAU1	99	97.479	ENSAMEG00000013681	STAU1	95	97.030	Ailuropoda_melanoleuca
ENSSSCG00000027444	STAU1	99	74.751	ENSACIG00000015918	stau1	96	75.397	Amphilophus_citrinellus
ENSSSCG00000027444	STAU1	99	75.000	ENSAOCG00000012224	stau1	96	72.388	Amphiprion_ocellaris
ENSSSCG00000027444	STAU1	99	75.000	ENSAPEG00000012308	stau1	96	72.388	Amphiprion_percula
ENSSSCG00000027444	STAU1	99	75.374	ENSATEG00000024600	stau1	99	74.755	Anabas_testudineus
ENSSSCG00000027444	STAU1	99	88.686	ENSAPLG00000010527	STAU1	94	88.258	Anas_platyrhynchos
ENSSSCG00000027444	STAU1	99	88.206	ENSACAG00000015909	STAU1	95	88.086	Anolis_carolinensis
ENSSSCG00000027444	STAU1	100	96.741	ENSANAG00000032714	STAU1	100	96.741	Aotus_nancymaae
ENSSSCG00000027444	STAU1	99	73.719	ENSACLG00000012270	stau1	96	73.010	Astatotilapia_calliptera
ENSSSCG00000027444	STAU1	100	73.347	ENSAMXG00000016812	stau1	99	73.438	Astyanax_mexicanus
ENSSSCG00000027444	STAU1	100	97.400	ENSBTAG00000000241	STAU1	100	97.400	Bos_taurus
ENSSSCG00000027444	STAU1	100	97.747	ENSCJAG00000016233	STAU1	100	97.747	Callithrix_jacchus
ENSSSCG00000027444	STAU1	100	97.400	ENSCAFG00000011347	STAU1	100	95.930	Canis_familiaris
ENSSSCG00000027444	STAU1	100	96.370	ENSCAFG00020017123	STAU1	100	96.370	Canis_lupus_dingo
ENSSSCG00000027444	STAU1	100	97.227	ENSCHIG00000001799	-	100	97.227	Capra_hircus
ENSSSCG00000027444	STAU1	100	94.355	ENSTSYG00000036179	-	100	93.762	Carlito_syrichta
ENSSSCG00000027444	STAU1	100	93.145	ENSCAPG00000017041	STAU1	100	93.522	Cavia_aperea
ENSSSCG00000027444	STAU1	99	91.515	ENSCPOG00000005566	STAU1	100	91.515	Cavia_porcellus
ENSSSCG00000027444	STAU1	100	96.913	ENSCCAG00000034339	STAU1	100	96.913	Cebus_capucinus
ENSSSCG00000027444	STAU1	100	97.574	ENSCATG00000028474	STAU1	100	97.574	Cercocebus_atys
ENSSSCG00000027444	STAU1	99	95.152	ENSCLAG00000006516	-	100	95.152	Chinchilla_lanigera
ENSSSCG00000027444	STAU1	100	78.112	ENSCLAG00000002784	-	100	78.112	Chinchilla_lanigera
ENSSSCG00000027444	STAU1	100	96.976	ENSCSAG00000014986	STAU1	100	96.976	Chlorocebus_sabaeus
ENSSSCG00000027444	STAU1	100	96.540	ENSCHOG00000001511	STAU1	100	96.540	Choloepus_hoffmanni
ENSSSCG00000027444	STAU1	99	88.372	ENSCPBG00000026741	STAU1	96	87.891	Chrysemys_picta_bellii
ENSSSCG00000027444	STAU1	100	97.400	ENSCANG00000039220	STAU1	100	97.400	Colobus_angolensis_palliatus
ENSSSCG00000027444	STAU1	99	89.495	ENSCGRG00001013453	Stau1	100	89.495	Cricetulus_griseus_chok1gshd
ENSSSCG00000027444	STAU1	99	89.495	ENSCGRG00000007216	Stau1	100	89.495	Cricetulus_griseus_crigri
ENSSSCG00000027444	STAU1	99	67.541	ENSCSEG00000000792	stau1	96	63.571	Cynoglossus_semilaevis
ENSSSCG00000027444	STAU1	99	72.211	ENSCVAG00000005906	stau1	99	72.332	Cyprinodon_variegatus
ENSSSCG00000027444	STAU1	99	73.346	ENSDARG00000044182	stau1	96	73.346	Danio_rerio
ENSSSCG00000027444	STAU1	100	96.886	ENSDNOG00000014933	STAU1	98	96.886	Dasypus_novemcinctus
ENSSSCG00000027444	STAU1	99	90.798	ENSDORG00000030220	Stau1	100	90.798	Dipodomys_ordii
ENSSSCG00000027444	STAU1	88	97.044	ENSETEG00000018235	STAU1	88	97.044	Echinops_telfairi
ENSSSCG00000027444	STAU1	100	98.253	ENSEASG00005023343	STAU1	100	98.253	Equus_asinus_asinus
ENSSSCG00000027444	STAU1	100	98.267	ENSECAG00000012894	STAU1	100	98.267	Equus_caballus
ENSSSCG00000027444	STAU1	90	100.000	ENSEEUG00000014344	STAU1	80	100.000	Erinaceus_europaeus
ENSSSCG00000027444	STAU1	99	73.127	ENSELUG00000002529	stau1	94	73.127	Esox_lucius
ENSSSCG00000027444	STAU1	100	97.400	ENSFCAG00000001447	STAU1	100	97.400	Felis_catus
ENSSSCG00000027444	STAU1	99	87.752	ENSFALG00000012940	STAU1	96	87.154	Ficedula_albicollis
ENSSSCG00000027444	STAU1	99	94.343	ENSFDAG00000014119	-	100	94.343	Fukomys_damarensis
ENSSSCG00000027444	STAU1	100	72.435	ENSFDAG00000020837	-	100	72.435	Fukomys_damarensis
ENSSSCG00000027444	STAU1	99	73.884	ENSFHEG00000013517	stau1	99	71.899	Fundulus_heteroclitus
ENSSSCG00000027444	STAU1	99	65.323	ENSGMOG00000016850	stau1	96	61.552	Gadus_morhua
ENSSSCG00000027444	STAU1	99	89.933	ENSGALG00000004736	STAU1	96	89.723	Gallus_gallus
ENSSSCG00000027444	STAU1	99	74.545	ENSGAFG00000010437	stau1	96	74.168	Gambusia_affinis
ENSSSCG00000027444	STAU1	99	73.554	ENSGACG00000001352	stau1	96	70.950	Gasterosteus_aculeatus
ENSSSCG00000027444	STAU1	99	88.926	ENSGAGG00000009825	STAU1	96	88.538	Gopherus_agassizii
ENSSSCG00000027444	STAU1	100	96.016	ENSGGOG00000025351	STAU1	100	96.164	Gorilla_gorilla
ENSSSCG00000027444	STAU1	99	73.884	ENSHBUG00000023668	stau1	96	73.204	Haplochromis_burtoni
ENSSSCG00000027444	STAU1	99	95.910	ENSHGLG00000008730	STAU1	100	95.910	Heterocephalus_glaber_female
ENSSSCG00000027444	STAU1	99	95.910	ENSHGLG00100000098	STAU1	100	95.910	Heterocephalus_glaber_male
ENSSSCG00000027444	STAU1	99	71.227	ENSHCOG00000018461	stau1	92	68.156	Hippocampus_comes
ENSSSCG00000027444	STAU1	95	74.171	ENSIPUG00000023725	stau1	95	74.120	Ictalurus_punctatus
ENSSSCG00000027444	STAU1	99	95.501	ENSSTOG00000003634	STAU1	100	95.501	Ictidomys_tridecemlineatus
ENSSSCG00000027444	STAU1	99	93.047	ENSJJAG00000020032	Stau1	100	93.047	Jaculus_jaculus
ENSSSCG00000027444	STAU1	99	72.621	ENSKMAG00000007135	stau1	93	72.353	Kryptolebias_marmoratus
ENSSSCG00000027444	STAU1	99	72.906	ENSLBEG00000020172	stau1	96	69.871	Labrus_bergylta
ENSSSCG00000027444	STAU1	99	83.333	ENSLACG00000016157	STAU1	96	83.333	Latimeria_chalumnae
ENSSSCG00000027444	STAU1	99	79.833	ENSLOCG00000003134	stau1	96	77.196	Lepisosteus_oculatus
ENSSSCG00000027444	STAU1	100	95.363	ENSLAFG00000003238	STAU1	100	95.481	Loxodonta_africana
ENSSSCG00000027444	STAU1	100	97.574	ENSMFAG00000040931	STAU1	100	98.529	Macaca_fascicularis
ENSSSCG00000027444	STAU1	100	96.016	ENSMMUG00000002302	STAU1	100	98.529	Macaca_mulatta
ENSSSCG00000027444	STAU1	100	97.574	ENSMNEG00000033821	STAU1	100	97.574	Macaca_nemestrina
ENSSSCG00000027444	STAU1	100	97.400	ENSMLEG00000031383	STAU1	100	97.400	Mandrillus_leucophaeus
ENSSSCG00000027444	STAU1	99	75.500	ENSMAMG00000017586	stau1	99	72.932	Mastacembelus_armatus
ENSSSCG00000027444	STAU1	99	73.841	ENSMZEG00005015605	stau1	96	70.501	Maylandia_zebra
ENSSSCG00000027444	STAU1	99	88.852	ENSMGAG00000004719	STAU1	94	88.454	Meleagris_gallopavo
ENSSSCG00000027444	STAU1	99	89.697	ENSMAUG00000013846	Stau1	100	89.697	Mesocricetus_auratus
ENSSSCG00000027444	STAU1	100	95.026	ENSMICG00000001995	STAU1	100	95.026	Microcebus_murinus
ENSSSCG00000027444	STAU1	99	91.002	ENSMOCG00000018743	Stau1	100	90.909	Microtus_ochrogaster
ENSSSCG00000027444	STAU1	100	72.636	ENSMMOG00000015455	stau1	99	73.387	Mola_mola
ENSSSCG00000027444	STAU1	100	93.145	ENSMODG00000016276	STAU1	99	92.927	Monodelphis_domestica
ENSSSCG00000027444	STAU1	99	74.669	ENSMALG00000000045	stau1	96	72.201	Monopterus_albus
ENSSSCG00000027444	STAU1	99	90.798	MGP_CAROLIEiJ_G0024699	Stau1	100	90.798	Mus_caroli
ENSSSCG00000027444	STAU1	99	90.184	ENSMUSG00000039536	Stau1	100	90.184	Mus_musculus
ENSSSCG00000027444	STAU1	99	90.389	MGP_PahariEiJ_G0026141	Stau1	100	90.389	Mus_pahari
ENSSSCG00000027444	STAU1	99	89.775	MGP_SPRETEiJ_G0025619	Stau1	100	89.775	Mus_spretus
ENSSSCG00000027444	STAU1	99	97.311	ENSMPUG00000017581	STAU1	99	96.832	Mustela_putorius_furo
ENSSSCG00000027444	STAU1	100	96.573	ENSMLUG00000008407	STAU1	98	96.534	Myotis_lucifugus
ENSSSCG00000027444	STAU1	99	93.535	ENSNGAG00000007108	Stau1	100	93.535	Nannospalax_galili
ENSSSCG00000027444	STAU1	99	73.884	ENSNBRG00000017596	stau1	96	73.204	Neolamprologus_brichardi
ENSSSCG00000027444	STAU1	100	97.054	ENSNLEG00000006955	STAU1	100	97.054	Nomascus_leucogenys
ENSSSCG00000027444	STAU1	93	93.074	ENSMEUG00000003263	STAU1	91	96.875	Notamacropus_eugenii
ENSSSCG00000027444	STAU1	100	92.354	ENSOPRG00000014569	STAU1	100	91.634	Ochotona_princeps
ENSSSCG00000027444	STAU1	100	95.766	ENSODEG00000006523	STAU1	100	96.154	Octodon_degus
ENSSSCG00000027444	STAU1	99	74.052	ENSONIG00000004152	stau1	95	73.398	Oreochromis_niloticus
ENSSSCG00000027444	STAU1	99	88.778	ENSOANG00000006394	STAU1	96	88.672	Ornithorhynchus_anatinus
ENSSSCG00000027444	STAU1	100	94.355	ENSOCUG00000006214	STAU1	100	93.957	Oryctolagus_cuniculus
ENSSSCG00000027444	STAU1	99	72.425	ENSOMEG00000002388	stau1	96	69.850	Oryzias_melastigma
ENSSSCG00000027444	STAU1	99	65.269	ENSOGAG00000028222	-	99	65.726	Otolemur_garnettii
ENSSSCG00000027444	STAU1	100	96.169	ENSOGAG00000002127	STAU1	98	95.712	Otolemur_garnettii
ENSSSCG00000027444	STAU1	100	97.329	ENSOARG00000012204	STAU1	100	97.053	Ovis_aries
ENSSSCG00000027444	STAU1	100	96.016	ENSPPAG00000032023	STAU1	100	96.164	Pan_paniscus
ENSSSCG00000027444	STAU1	100	97.379	ENSPPRG00000003436	STAU1	100	97.379	Panthera_pardus
ENSSSCG00000027444	STAU1	100	97.379	ENSPTIG00000011768	STAU1	100	97.227	Panthera_tigris_altaica
ENSSSCG00000027444	STAU1	100	96.016	ENSPTRG00000023130	STAU1	100	96.164	Pan_troglodytes
ENSSSCG00000027444	STAU1	100	97.574	ENSPANG00000020560	STAU1	100	97.574	Papio_anubis
ENSSSCG00000027444	STAU1	99	75.331	ENSPKIG00000024588	stau1	93	72.356	Paramormyrops_kingsleyae
ENSSSCG00000027444	STAU1	99	88.758	ENSPSIG00000010731	STAU1	95	88.340	Pelodiscus_sinensis
ENSSSCG00000027444	STAU1	99	75.415	ENSPMGG00000018553	stau1	99	72.470	Periophthalmus_magnuspinnatus
ENSSSCG00000027444	STAU1	99	89.899	ENSPEMG00000022045	Stau1	100	89.899	Peromyscus_maniculatus_bairdii
ENSSSCG00000027444	STAU1	100	93.347	ENSPCIG00000023269	STAU1	100	93.304	Phascolarctos_cinereus
ENSSSCG00000027444	STAU1	99	74.422	ENSPFOG00000017253	stau1	96	74.219	Poecilia_formosa
ENSSSCG00000027444	STAU1	66	71.646	ENSPLAG00000014829	stau1	96	69.634	Poecilia_latipinna
ENSSSCG00000027444	STAU1	94	73.868	ENSPMEG00000007495	stau1	94	73.542	Poecilia_mexicana
ENSSSCG00000027444	STAU1	99	73.927	ENSPREG00000003477	stau1	96	73.633	Poecilia_reticulata
ENSSSCG00000027444	STAU1	100	97.054	ENSPPYG00000011111	STAU1	100	97.054	Pongo_abelii
ENSSSCG00000027444	STAU1	94	88.787	ENSPCAG00000002459	STAU1	100	88.787	Procavia_capensis
ENSSSCG00000027444	STAU1	100	96.014	ENSPCOG00000027746	STAU1	100	96.014	Propithecus_coquereli
ENSSSCG00000027444	STAU1	86	97.449	ENSPVAG00000015019	STAU1	86	97.449	Pteropus_vampyrus
ENSSSCG00000027444	STAU1	99	73.884	ENSPNYG00000014436	stau1	96	73.204	Pundamilia_nyererei
ENSSSCG00000027444	STAU1	99	72.340	ENSPNAG00000011323	stau1	96	72.534	Pygocentrus_nattereri
ENSSSCG00000027444	STAU1	99	89.495	ENSRNOG00000007781	Stau1	100	89.495	Rattus_norvegicus
ENSSSCG00000027444	STAU1	100	96.016	ENSRBIG00000037345	STAU1	100	96.761	Rhinopithecus_bieti
ENSSSCG00000027444	STAU1	100	97.574	ENSRROG00000039008	STAU1	100	97.574	Rhinopithecus_roxellana
ENSSSCG00000027444	STAU1	100	97.581	ENSSBOG00000034448	STAU1	100	96.913	Saimiri_boliviensis_boliviensis
ENSSSCG00000027444	STAU1	100	93.347	ENSSHAG00000009492	STAU1	97	93.543	Sarcophilus_harrisii
ENSSSCG00000027444	STAU1	99	76.861	ENSSFOG00015021497	stau1	99	73.234	Scleropages_formosus
ENSSSCG00000027444	STAU1	99	74.669	ENSSMAG00000017410	stau1	96	71.828	Scophthalmus_maximus
ENSSSCG00000027444	STAU1	99	75.449	ENSSDUG00000019439	stau1	96	72.761	Seriola_dumerili
ENSSSCG00000027444	STAU1	99	75.449	ENSSLDG00000025040	stau1	93	72.761	Seriola_lalandi_dorsalis
ENSSSCG00000027444	STAU1	64	92.941	ENSSARG00000010389	-	64	92.941	Sorex_araneus
ENSSSCG00000027444	STAU1	99	87.708	ENSSPUG00000017983	STAU1	100	87.280	Sphenodon_punctatus
ENSSSCG00000027444	STAU1	99	75.000	ENSSPAG00000019275	stau1	93	72.388	Stegastes_partitus
ENSSSCG00000027444	STAU1	99	87.542	ENSTGUG00000008784	STAU1	93	86.914	Taeniopygia_guttata
ENSSSCG00000027444	STAU1	99	75.050	ENSTRUG00000005837	stau1	93	75.342	Takifugu_rubripes
ENSSSCG00000027444	STAU1	99	73.510	ENSTNIG00000014732	stau1	95	70.045	Tetraodon_nigroviridis
ENSSSCG00000027444	STAU1	93	93.573	ENSTBEG00000009404	STAU1	100	82.353	Tupaia_belangeri
ENSSSCG00000027444	STAU1	93	94.805	ENSTTRG00000004285	STAU1	92	100.000	Tursiops_truncatus
ENSSSCG00000027444	STAU1	100	95.626	ENSUAMG00000025449	STAU1	100	95.626	Ursus_americanus
ENSSSCG00000027444	STAU1	75	94.444	ENSUMAG00000024475	STAU1	89	94.444	Ursus_maritimus
ENSSSCG00000027444	STAU1	100	98.787	ENSVPAG00000001313	STAU1	100	98.787	Vicugna_pacos
ENSSSCG00000027444	STAU1	100	96.535	ENSVVUG00000022325	STAU1	100	96.124	Vulpes_vulpes
ENSSSCG00000027444	STAU1	99	82.915	ENSXETG00000001783	stau1	96	82.840	Xenopus_tropicalis
ENSSSCG00000027444	STAU1	61	72.432	ENSXCOG00000008804	stau1	98	72.021	Xiphophorus_couchianus
ENSSSCG00000027444	STAU1	99	74.545	ENSXMAG00000016175	stau1	96	74.168	Xiphophorus_maculatus