EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000027608 (Gene tree)
Gene ID: 100521436
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 436882 bases
Position: chr2:100456787-100893668
Accession: 100521436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000020251	Arb2	PF09757.9	1.2e-09	1	1
ENSSSCP00000035933	Arb2	PF09757.9	1.2e-09	1	1
ENSSSCP00000045691	Arb2	PF09757.9	1.2e-09	1	1
ENSSSCP00000033142	Arb2	PF09757.9	1.2e-09	1	1
ENSSSCP00000015057	Arb2	PF09757.9	1.4e-09	1	1
ENSSSCP00000048338	Arb2	PF09757.9	1.7e-09	1	1
ENSSSCP00000036799	Arb2	PF09757.9	1.9e-09	1	1
ENSSSCP00000051913	Arb2	PF09757.9	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000015467	FAM172A-210	1400	XM_021085390	ENSSSCP00000015057	380 (aa)	XP_020941049	F1RNX5
ENSSSCT00000065346	FAM172A-203	7534	XM_013994988	ENSSSCP00000045691	370 (aa)	XP_013850442	I3L892
ENSSSCT00000046017	FAM172A-201	1457	-	ENSSSCP00000048338	399 (aa)	-	A0A287AWU1
ENSSSCT00000042389	FAM172A-208	1362	-	ENSSSCP00000051127	352 (aa)	-	A0A287B4T9
ENSSSCT00000045326	FAM172A-206	1570	-	ENSSSCP00000033142	372 (aa)	-	A0A286ZNT9
ENSSSCT00000022254	FAM172A-202	7244	XM_013994986	ENSSSCP00000020251	370 (aa)	XP_013850440	I3L892
ENSSSCT00000041667	FAM172A-205	1554	-	ENSSSCP00000035933	370 (aa)	-	I3L892
ENSSSCT00000050975	FAM172A-209	1632	XM_013994983	ENSSSCP00000051913	416 (aa)	XP_013850437	A0A287B628
ENSSSCT00000049759	FAM172A-204	1773	-	ENSSSCP00000036799	416 (aa)	-	A0A287B628
ENSSSCT00000043904	FAM172A-207	1437	XM_021085391	ENSSSCP00000034731	377 (aa)	XP_020941050	A0A286ZSW2

Gene Model

Click here to download ENSSSCG00000027608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027608	FAM172A	100	98.108	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSSSCG00000027608	FAM172A	61	38.961	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSSSCG00000027608	FAM172A	100	87.568	ENSAPLG00000004055	FAM172A	100	86.538	Anas_platyrhynchos
ENSSSCG00000027608	FAM172A	97	88.649	ENSACAG00000013305	FAM172A	98	87.302	Anolis_carolinensis
ENSSSCG00000027608	FAM172A	94	91.922	ENSANAG00000035869	FAM172A	86	100.000	Aotus_nancymaae
ENSSSCG00000027608	FAM172A	100	98.649	ENSBTAG00000050195	FAM172A	100	98.558	Bos_taurus
ENSSSCG00000027608	FAM172A	100	98.649	ENSCJAG00000010444	FAM172A	100	98.317	Callithrix_jacchus
ENSSSCG00000027608	FAM172A	97	99.459	ENSCAFG00000008064	FAM172A	99	99.459	Canis_familiaris
ENSSSCG00000027608	FAM172A	100	97.838	ENSCAFG00020006210	FAM172A	100	97.837	Canis_lupus_dingo
ENSSSCG00000027608	FAM172A	100	98.378	ENSCHIG00000008440	FAM172A	100	98.317	Capra_hircus
ENSSSCG00000027608	FAM172A	72	98.496	ENSTSYG00000006286	FAM172A	85	98.496	Carlito_syrichta
ENSSSCG00000027608	FAM172A	61	86.726	ENSCAPG00000014103	-	100	86.726	Cavia_aperea
ENSSSCG00000027608	FAM172A	100	98.108	ENSCCAG00000023116	FAM172A	100	98.108	Cebus_capucinus
ENSSSCG00000027608	FAM172A	97	95.946	ENSCLAG00000005472	FAM172A	94	98.734	Chinchilla_lanigera
ENSSSCG00000027608	FAM172A	97	43.631	ENSCPBG00000004402	-	96	43.631	Chrysemys_picta_bellii
ENSSSCG00000027608	FAM172A	88	85.890	ENSCANG00000040412	FAM172A	92	97.407	Colobus_angolensis_palliatus
ENSSSCG00000027608	FAM172A	100	98.919	ENSDNOG00000004689	FAM172A	100	98.798	Dasypus_novemcinctus
ENSSSCG00000027608	FAM172A	88	85.276	ENSDORG00000013558	Fam172a	88	97.407	Dipodomys_ordii
ENSSSCG00000027608	FAM172A	89	40.303	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSSSCG00000027608	FAM172A	100	95.405	ENSECAG00000018274	FAM172A	100	95.192	Equus_caballus
ENSSSCG00000027608	FAM172A	91	97.313	ENSEEUG00000002887	FAM172A	100	86.058	Erinaceus_europaeus
ENSSSCG00000027608	FAM172A	99	69.169	ENSELUG00000017647	fam172a	98	68.750	Esox_lucius
ENSSSCG00000027608	FAM172A	100	99.189	ENSFCAG00000025443	FAM172A	100	99.038	Felis_catus
ENSSSCG00000027608	FAM172A	96	43.454	ENSFALG00000006501	-	100	43.454	Ficedula_albicollis
ENSSSCG00000027608	FAM172A	95	88.398	ENSFALG00000009072	FAM172A	98	88.430	Ficedula_albicollis
ENSSSCG00000027608	FAM172A	100	88.919	ENSGALG00000014661	FAM172A	100	87.019	Gallus_gallus
ENSSSCG00000027608	FAM172A	100	91.081	ENSGAGG00000003839	FAM172A	100	90.144	Gopherus_agassizii
ENSSSCG00000027608	FAM172A	94	45.042	ENSGAGG00000022828	-	93	45.042	Gopherus_agassizii
ENSSSCG00000027608	FAM172A	100	97.838	ENSGGOG00000010296	FAM172A	100	97.596	Gorilla_gorilla
ENSSSCG00000027608	FAM172A	100	94.595	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSSSCG00000027608	FAM172A	97	96.748	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSSSCG00000027608	FAM172A	100	98.378	ENSSTOG00000009918	FAM172A	100	98.077	Ictidomys_tridecemlineatus
ENSSSCG00000027608	FAM172A	91	50.000	ENSLACG00000001532	si:ch73-41e3.7	92	49.138	Latimeria_chalumnae
ENSSSCG00000027608	FAM172A	100	75.603	ENSLOCG00000001629	fam172a	100	75.179	Lepisosteus_oculatus
ENSSSCG00000027608	FAM172A	88	85.276	ENSMFAG00000001171	FAM172A	92	97.407	Macaca_fascicularis
ENSSSCG00000027608	FAM172A	100	98.108	ENSMNEG00000039938	FAM172A	92	97.407	Macaca_nemestrina
ENSSSCG00000027608	FAM172A	100	99.459	ENSMICG00000030403	FAM172A	100	98.798	Microcebus_murinus
ENSSSCG00000027608	FAM172A	100	95.135	ENSMOCG00000003613	Fam172a	100	95.135	Microtus_ochrogaster
ENSSSCG00000027608	FAM172A	100	91.081	ENSMODG00000020131	FAM172A	100	90.144	Monodelphis_domestica
ENSSSCG00000027608	FAM172A	84	96.203	MGP_PahariEiJ_G0015818	Fam172a	100	96.203	Mus_pahari
ENSSSCG00000027608	FAM172A	100	98.108	ENSNGAG00000019570	Fam172a	100	98.108	Nannospalax_galili
ENSSSCG00000027608	FAM172A	88	85.583	ENSNLEG00000013903	FAM172A	89	97.407	Nomascus_leucogenys
ENSSSCG00000027608	FAM172A	97	89.459	ENSOANG00000011068	FAM172A	99	89.459	Ornithorhynchus_anatinus
ENSSSCG00000027608	FAM172A	97	98.607	ENSOCUG00000007299	FAM172A	96	97.778	Oryctolagus_cuniculus
ENSSSCG00000027608	FAM172A	100	96.486	ENSOGAG00000015189	FAM172A	100	96.394	Otolemur_garnettii
ENSSSCG00000027608	FAM172A	97	98.645	ENSOARG00000016711	FAM172A	84	98.645	Ovis_aries
ENSSSCG00000027608	FAM172A	88	85.276	ENSPPAG00000030542	FAM172A	92	97.037	Pan_paniscus
ENSSSCG00000027608	FAM172A	100	99.189	ENSPPRG00000006653	FAM172A	100	99.038	Panthera_pardus
ENSSSCG00000027608	FAM172A	100	99.189	ENSPTIG00000012681	FAM172A	100	99.038	Panthera_tigris_altaica
ENSSSCG00000027608	FAM172A	88	85.276	ENSPTRG00000017074	FAM172A	92	97.037	Pan_troglodytes
ENSSSCG00000027608	FAM172A	88	85.276	ENSPANG00000011687	FAM172A	92	97.407	Papio_anubis
ENSSSCG00000027608	FAM172A	97	74.722	ENSPKIG00000012314	fam172a	87	91.228	Paramormyrops_kingsleyae
ENSSSCG00000027608	FAM172A	100	95.946	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSSSCG00000027608	FAM172A	100	91.081	ENSPCIG00000028612	FAM172A	100	90.144	Phascolarctos_cinereus
ENSSSCG00000027608	FAM172A	62	99.127	ENSPCOG00000024072	FAM172A	93	99.127	Propithecus_coquereli
ENSSSCG00000027608	FAM172A	73	94.052	ENSRNOG00000013844	Fam172a	99	94.052	Rattus_norvegicus
ENSSSCG00000027608	FAM172A	59	76.682	ENSRBIG00000028680	-	90	82.759	Rhinopithecus_bieti
ENSSSCG00000027608	FAM172A	88	85.890	ENSRROG00000023807	FAM172A	92	97.407	Rhinopithecus_roxellana
ENSSSCG00000027608	FAM172A	100	98.378	ENSSBOG00000019860	FAM172A	100	98.077	Saimiri_boliviensis_boliviensis
ENSSSCG00000027608	FAM172A	100	90.541	ENSSHAG00000013743	FAM172A	100	89.663	Sarcophilus_harrisii
ENSSSCG00000027608	FAM172A	100	88.108	ENSSPUG00000008161	FAM172A	100	87.019	Sphenodon_punctatus
ENSSSCG00000027608	FAM172A	100	86.757	ENSTGUG00000000715	FAM172A	100	87.105	Taeniopygia_guttata
ENSSSCG00000027608	FAM172A	90	46.726	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSSSCG00000027608	FAM172A	86	56.970	ENSTNIG00000009902	fam172a	99	59.337	Tetraodon_nigroviridis
ENSSSCG00000027608	FAM172A	100	95.946	ENSTTRG00000001521	FAM172A	100	95.433	Tursiops_truncatus
ENSSSCG00000027608	FAM172A	100	99.730	ENSUMAG00000005442	FAM172A	100	99.519	Ursus_maritimus
ENSSSCG00000027608	FAM172A	100	97.838	ENSVVUG00000022112	FAM172A	99	99.196	Vulpes_vulpes
ENSSSCG00000027608	FAM172A	98	43.836	ENSXETG00000033027	-	100	42.857	Xenopus_tropicalis
ENSSSCG00000027608	FAM172A	100	81.671	ENSXETG00000011592	fam172a	99	80.576	Xenopus_tropicalis