EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000027770 (Gene tree)
Gene ID: 100622748
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 22632 bases
Position: chr4:97415891-97438522
Accession: 100622748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025865	KH_1	PF00013.29	3.5e-33	1	2
ENSSSCP00000025865	KH_1	PF00013.29	3.5e-33	2	2
ENSSSCP00000048918	KH_1	PF00013.29	3.5e-33	1	2
ENSSSCP00000048918	KH_1	PF00013.29	3.5e-33	2	2
ENSSSCP00000025865	TUDOR	PF00567.24	2.9e-28	1	1
ENSSSCP00000048918	TUDOR	PF00567.24	2.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000057560	TDRKH-201	2826	XM_013997124	ENSSSCP00000048918	558 (aa)	XP_013852578	I3LP40
ENSSSCT00000032144	TDRKH-202	1944	-	ENSSSCP00000025865	558 (aa)	-	I3LP40

Gene Model

Click here to download ENSSSCG00000027770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027770	TDRKH	100	89.606	ENSG00000182134	TDRKH	100	97.710	Homo_sapiens
ENSSSCG00000027770	TDRKH	100	89.127	ENSAMEG00000000421	TDRKH	99	89.840	Ailuropoda_melanoleuca
ENSSSCG00000027770	TDRKH	85	58.848	ENSACAG00000007457	TDRKH	95	58.848	Anolis_carolinensis
ENSSSCG00000027770	TDRKH	100	88.710	ENSANAG00000021663	TDRKH	98	89.744	Aotus_nancymaae
ENSSSCG00000027770	TDRKH	100	92.832	ENSBTAG00000021594	TDRKH	99	92.832	Bos_taurus
ENSSSCG00000027770	TDRKH	100	89.247	ENSCJAG00000007955	TDRKH	98	90.354	Callithrix_jacchus
ENSSSCG00000027770	TDRKH	100	90.909	ENSCAFG00000012856	TDRKH	99	90.909	Canis_familiaris
ENSSSCG00000027770	TDRKH	100	90.909	ENSCAFG00020009606	TDRKH	99	90.909	Canis_lupus_dingo
ENSSSCG00000027770	TDRKH	100	92.473	ENSCHIG00000025326	TDRKH	99	92.473	Capra_hircus
ENSSSCG00000027770	TDRKH	100	89.068	ENSTSYG00000010405	TDRKH	99	89.068	Carlito_syrichta
ENSSSCG00000027770	TDRKH	92	86.770	ENSCAPG00000007565	TDRKH	97	86.770	Cavia_aperea
ENSSSCG00000027770	TDRKH	100	89.247	ENSCPOG00000003556	TDRKH	99	89.247	Cavia_porcellus
ENSSSCG00000027770	TDRKH	100	89.606	ENSCCAG00000033931	TDRKH	98	90.945	Cebus_capucinus
ENSSSCG00000027770	TDRKH	100	89.427	ENSCATG00000041878	TDRKH	98	90.551	Cercocebus_atys
ENSSSCG00000027770	TDRKH	100	86.380	ENSCLAG00000001088	TDRKH	99	86.380	Chinchilla_lanigera
ENSSSCG00000027770	TDRKH	100	89.606	ENSCSAG00000001820	TDRKH	99	89.606	Chlorocebus_sabaeus
ENSSSCG00000027770	TDRKH	89	86.190	ENSCHOG00000000264	TDRKH	88	86.190	Choloepus_hoffmanni
ENSSSCG00000027770	TDRKH	98	63.455	ENSCPBG00000008824	TDRKH	90	64.117	Chrysemys_picta_bellii
ENSSSCG00000027770	TDRKH	100	89.247	ENSCANG00000037367	TDRKH	98	90.551	Colobus_angolensis_palliatus
ENSSSCG00000027770	TDRKH	50	64.286	ENSCGRG00001010793	-	89	64.286	Cricetulus_griseus_chok1gshd
ENSSSCG00000027770	TDRKH	99	88.246	ENSCGRG00001006583	-	99	88.246	Cricetulus_griseus_chok1gshd
ENSSSCG00000027770	TDRKH	97	63.704	ENSCGRG00001011699	-	99	63.704	Cricetulus_griseus_chok1gshd
ENSSSCG00000027770	TDRKH	50	63.929	ENSCGRG00000012138	-	89	63.929	Cricetulus_griseus_crigri
ENSSSCG00000027770	TDRKH	99	88.246	ENSCGRG00000012937	-	99	88.246	Cricetulus_griseus_crigri
ENSSSCG00000027770	TDRKH	97	63.519	ENSCGRG00000013230	-	99	63.519	Cricetulus_griseus_crigri
ENSSSCG00000027770	TDRKH	92	87.597	ENSDNOG00000035650	TDRKH	100	87.597	Dasypus_novemcinctus
ENSSSCG00000027770	TDRKH	100	89.427	ENSDORG00000015322	Tdrkh	99	89.427	Dipodomys_ordii
ENSSSCG00000027770	TDRKH	100	82.740	ENSETEG00000008020	TDRKH	99	82.740	Echinops_telfairi
ENSSSCG00000027770	TDRKH	87	37.673	ENSEBUG00000010481	TDRKH	83	37.475	Eptatretus_burgeri
ENSSSCG00000027770	TDRKH	100	91.039	ENSEASG00005005213	TDRKH	99	91.039	Equus_asinus_asinus
ENSSSCG00000027770	TDRKH	100	91.039	ENSECAG00000013096	TDRKH	98	92.262	Equus_caballus
ENSSSCG00000027770	TDRKH	72	94.286	ENSEEUG00000015952	TDRKH	71	94.286	Erinaceus_europaeus
ENSSSCG00000027770	TDRKH	100	91.071	ENSFCAG00000010980	TDRKH	99	91.071	Felis_catus
ENSSSCG00000027770	TDRKH	100	87.097	ENSFDAG00000015315	TDRKH	99	87.097	Fukomys_damarensis
ENSSSCG00000027770	TDRKH	97	56.124	ENSGALG00000031812	TDRKH	96	56.124	Gallus_gallus
ENSSSCG00000027770	TDRKH	100	62.390	ENSGAGG00000005447	TDRKH	99	62.917	Gopherus_agassizii
ENSSSCG00000027770	TDRKH	100	89.964	ENSGGOG00000025419	TDRKH	99	90.945	Gorilla_gorilla
ENSSSCG00000027770	TDRKH	100	86.071	ENSHGLG00000007478	TDRKH	99	86.071	Heterocephalus_glaber_female
ENSSSCG00000027770	TDRKH	100	86.071	ENSHGLG00100007927	TDRKH	99	86.071	Heterocephalus_glaber_male
ENSSSCG00000027770	TDRKH	100	89.964	ENSSTOG00000006506	TDRKH	99	89.964	Ictidomys_tridecemlineatus
ENSSSCG00000027770	TDRKH	100	87.321	ENSJJAG00000000323	Tdrkh	99	87.321	Jaculus_jaculus
ENSSSCG00000027770	TDRKH	72	55.122	ENSLACG00000017639	TDRKH	98	55.122	Latimeria_chalumnae
ENSSSCG00000027770	TDRKH	100	87.522	ENSLAFG00000006274	TDRKH	99	87.522	Loxodonta_africana
ENSSSCG00000027770	TDRKH	100	89.606	ENSMFAG00000041641	TDRKH	98	90.748	Macaca_fascicularis
ENSSSCG00000027770	TDRKH	99	89.474	ENSMMUG00000009096	TDRKH	98	90.748	Macaca_mulatta
ENSSSCG00000027770	TDRKH	100	89.606	ENSMNEG00000021524	TDRKH	98	90.748	Macaca_nemestrina
ENSSSCG00000027770	TDRKH	100	89.606	ENSMLEG00000033882	TDRKH	98	90.748	Mandrillus_leucophaeus
ENSSSCG00000027770	TDRKH	99	87.612	ENSMAUG00000019159	Tdrkh	99	87.612	Mesocricetus_auratus
ENSSSCG00000027770	TDRKH	100	90.860	ENSMICG00000010682	-	99	90.860	Microcebus_murinus
ENSSSCG00000027770	TDRKH	100	70.430	ENSMICG00000042330	-	99	70.545	Microcebus_murinus
ENSSSCG00000027770	TDRKH	100	62.032	ENSMOCG00000014074	-	99	62.032	Microtus_ochrogaster
ENSSSCG00000027770	TDRKH	99	82.182	ENSMOCG00000002113	-	99	82.065	Microtus_ochrogaster
ENSSSCG00000027770	TDRKH	100	80.071	ENSMODG00000018906	TDRKH	95	80.071	Monodelphis_domestica
ENSSSCG00000027770	TDRKH	100	89.068	MGP_CAROLIEiJ_G0025310	Tdrkh	99	90.476	Mus_caroli
ENSSSCG00000027770	TDRKH	100	89.606	ENSMUSG00000041912	Tdrkh	99	90.476	Mus_musculus
ENSSSCG00000027770	TDRKH	100	88.889	MGP_PahariEiJ_G0026753	Tdrkh	99	89.796	Mus_pahari
ENSSSCG00000027770	TDRKH	100	89.606	MGP_SPRETEiJ_G0026252	Tdrkh	99	90.476	Mus_spretus
ENSSSCG00000027770	TDRKH	96	91.095	ENSMPUG00000003558	TDRKH	99	90.714	Mustela_putorius_furo
ENSSSCG00000027770	TDRKH	100	89.964	ENSMLUG00000002213	TDRKH	99	89.964	Myotis_lucifugus
ENSSSCG00000027770	TDRKH	100	89.247	ENSNGAG00000017825	Tdrkh	99	89.247	Nannospalax_galili
ENSSSCG00000027770	TDRKH	100	89.606	ENSNLEG00000010284	TDRKH	99	89.606	Nomascus_leucogenys
ENSSSCG00000027770	TDRKH	89	90.909	ENSMEUG00000006144	TDRKH	88	90.909	Notamacropus_eugenii
ENSSSCG00000027770	TDRKH	81	88.889	ENSOPRG00000016049	TDRKH	81	88.889	Ochotona_princeps
ENSSSCG00000027770	TDRKH	100	86.918	ENSODEG00000009532	-	99	86.918	Octodon_degus
ENSSSCG00000027770	TDRKH	100	85.305	ENSODEG00000001075	-	99	85.305	Octodon_degus
ENSSSCG00000027770	TDRKH	61	72.340	ENSOANG00000001094	-	87	72.340	Ornithorhynchus_anatinus
ENSSSCG00000027770	TDRKH	100	77.778	ENSOCUG00000001387	TDRKH	99	77.778	Oryctolagus_cuniculus
ENSSSCG00000027770	TDRKH	52	76.389	ENSOGAG00000030085	-	97	74.653	Otolemur_garnettii
ENSSSCG00000027770	TDRKH	100	74.552	ENSOGAG00000032601	-	99	74.552	Otolemur_garnettii
ENSSSCG00000027770	TDRKH	100	80.776	ENSOGAG00000001839	-	99	80.776	Otolemur_garnettii
ENSSSCG00000027770	TDRKH	100	92.473	ENSOARG00000021052	TDRKH	99	92.473	Ovis_aries
ENSSSCG00000027770	TDRKH	100	90.143	ENSPPAG00000028994	TDRKH	99	90.143	Pan_paniscus
ENSSSCG00000027770	TDRKH	100	91.607	ENSPPRG00000001585	TDRKH	99	91.607	Panthera_pardus
ENSSSCG00000027770	TDRKH	100	91.607	ENSPTIG00000019916	TDRKH	99	91.607	Panthera_tigris_altaica
ENSSSCG00000027770	TDRKH	100	90.143	ENSPTRG00000001297	TDRKH	99	91.142	Pan_troglodytes
ENSSSCG00000027770	TDRKH	100	89.606	ENSPANG00000001986	TDRKH	98	90.748	Papio_anubis
ENSSSCG00000027770	TDRKH	93	63.227	ENSPSIG00000008541	TDRKH	100	63.227	Pelodiscus_sinensis
ENSSSCG00000027770	TDRKH	100	89.247	ENSPEMG00000011171	Tdrkh	99	89.247	Peromyscus_maniculatus_bairdii
ENSSSCG00000027770	TDRKH	100	81.162	ENSPCIG00000021201	TDRKH	98	81.162	Phascolarctos_cinereus
ENSSSCG00000027770	TDRKH	100	89.964	ENSPPYG00000000855	TDRKH	99	89.964	Pongo_abelii
ENSSSCG00000027770	TDRKH	100	88.889	ENSPCOG00000027505	TDRKH	99	88.889	Propithecus_coquereli
ENSSSCG00000027770	TDRKH	100	86.559	ENSPVAG00000005234	TDRKH	99	86.559	Pteropus_vampyrus
ENSSSCG00000027770	TDRKH	100	89.785	ENSRNOG00000020860	Tdrkh	99	89.785	Rattus_norvegicus
ENSSSCG00000027770	TDRKH	100	89.427	ENSRBIG00000044860	TDRKH	98	90.551	Rhinopithecus_bieti
ENSSSCG00000027770	TDRKH	100	89.427	ENSRROG00000036923	TDRKH	98	90.551	Rhinopithecus_roxellana
ENSSSCG00000027770	TDRKH	100	71.505	ENSSBOG00000034454	TDRKH	99	71.505	Saimiri_boliviensis_boliviensis
ENSSSCG00000027770	TDRKH	100	81.129	ENSSHAG00000015859	TDRKH	88	81.129	Sarcophilus_harrisii
ENSSSCG00000027770	TDRKH	100	78.136	ENSSARG00000008525	TDRKH	99	78.136	Sorex_araneus
ENSSSCG00000027770	TDRKH	92	61.194	ENSSPUG00000002369	TDRKH	97	61.754	Sphenodon_punctatus
ENSSSCG00000027770	TDRKH	100	89.427	ENSTBEG00000011201	TDRKH	99	89.427	Tupaia_belangeri
ENSSSCG00000027770	TDRKH	100	84.946	ENSTTRG00000003149	TDRKH	99	84.946	Tursiops_truncatus
ENSSSCG00000027770	TDRKH	100	89.286	ENSUAMG00000019589	TDRKH	99	89.286	Ursus_americanus
ENSSSCG00000027770	TDRKH	100	89.464	ENSUMAG00000001456	TDRKH	99	89.464	Ursus_maritimus
ENSSSCG00000027770	TDRKH	100	92.832	ENSVPAG00000000666	TDRKH	99	92.832	Vicugna_pacos
ENSSSCG00000027770	TDRKH	100	91.071	ENSVVUG00000013241	TDRKH	99	91.071	Vulpes_vulpes
ENSSSCG00000027770	TDRKH	93	40.146	ENSXETG00000019909	tdrkh	91	40.377	Xenopus_tropicalis