EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000027826 (Gene tree)
Gene ID: 100518347
Gene Symbol: -
Alias: -
Full Name: GTPase%2C IMAP family member 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23081 bases
Position: chr18:6429886-6452966
Accession: 100518347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035566	MMR_HSR1	PF01926.23	1.4e-09	1	1
ENSSSCP00000040504	MMR_HSR1	PF01926.23	1.4e-09	1	1
ENSSSCP00000025015	MMR_HSR1	PF01926.23	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052261	-	2273	XM_013990746	ENSSSCP00000035566	317 (aa)	XP_013846200	K9IVM5
ENSSSCT00000038872	-	2303	XM_021078913	ENSSSCP00000040504	317 (aa)	XP_020934572	K9IVM5
ENSSSCT00000026032	-	1022	-	ENSSSCP00000025015	322 (aa)	-	I3LLP5

Gene Model

Click here to download ENSSSCG00000027826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000027826	-	65	43.005	ENSSSCG00000016452	GIMAP8	85	43.500
ENSSSCG00000027826	-	82	39.777	ENSSSCG00000031897	-	89	39.777
ENSSSCG00000027826	-	68	37.500	ENSSSCG00000027196	-	89	37.500
ENSSSCG00000027826	-	64	43.415	ENSSSCG00000016449	GIMAP2	59	43.415
ENSSSCG00000027826	-	68	37.209	ENSSSCG00000039407	-	70	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027826	-	100	57.492	ENSG00000133574	GIMAP4	100	64.238	Homo_sapiens
ENSSSCG00000027826	-	95	57.566	ENSAMEG00000019628	-	95	57.566	Ailuropoda_melanoleuca
ENSSSCG00000027826	-	95	58.224	ENSAMEG00000019779	-	95	58.224	Ailuropoda_melanoleuca
ENSSSCG00000027826	-	96	59.547	ENSANAG00000037676	GIMAP4	90	59.547	Aotus_nancymaae
ENSSSCG00000027826	-	98	62.975	ENSBTAG00000054649	-	99	62.975	Bos_taurus
ENSSSCG00000027826	-	99	62.187	ENSBTAG00000046257	GIMAP4	99	62.187	Bos_taurus
ENSSSCG00000027826	-	96	59.547	ENSCJAG00000047018	GIMAP4	94	59.547	Callithrix_jacchus
ENSSSCG00000027826	-	99	57.188	ENSCAFG00000004579	GIMAP4	97	57.188	Canis_familiaris
ENSSSCG00000027826	-	99	57.188	ENSCAFG00020006498	GIMAP4	87	57.188	Canis_lupus_dingo
ENSSSCG00000027826	-	99	58.125	ENSCHIG00000005581	-	91	68.966	Capra_hircus
ENSSSCG00000027826	-	99	64.688	ENSCHIG00000019645	-	99	64.688	Capra_hircus
ENSSSCG00000027826	-	99	64.062	ENSCHIG00000013558	-	99	64.062	Capra_hircus
ENSSSCG00000027826	-	98	62.025	ENSCHIG00000023846	-	99	62.025	Capra_hircus
ENSSSCG00000027826	-	99	57.812	ENSCHIG00000023365	-	99	57.812	Capra_hircus
ENSSSCG00000027826	-	98	64.873	ENSCHIG00000020146	-	99	64.873	Capra_hircus
ENSSSCG00000027826	-	99	53.235	ENSTSYG00000000820	GIMAP4	98	53.235	Carlito_syrichta
ENSSSCG00000027826	-	60	65.263	ENSCAPG00000013479	-	95	65.263	Cavia_aperea
ENSSSCG00000027826	-	96	54.397	ENSCPOG00000037321	GIMAP4	98	54.397	Cavia_porcellus
ENSSSCG00000027826	-	96	58.252	ENSCCAG00000033055	GIMAP4	94	58.252	Cebus_capucinus
ENSSSCG00000027826	-	97	59.615	ENSCATG00000038688	GIMAP4	91	63.985	Cercocebus_atys
ENSSSCG00000027826	-	97	59.615	ENSCSAG00000006878	GIMAP4	95	59.615	Chlorocebus_sabaeus
ENSSSCG00000027826	-	97	59.295	ENSCANG00000012786	GIMAP4	95	59.295	Colobus_angolensis_palliatus
ENSSSCG00000027826	-	99	55.692	ENSCGRG00001019121	Gimap4	89	66.837	Cricetulus_griseus_chok1gshd
ENSSSCG00000027826	-	99	55.692	ENSCGRG00000014410	Gimap4	89	66.837	Cricetulus_griseus_crigri
ENSSSCG00000027826	-	93	56.623	ENSECAG00000007681	-	91	56.623	Equus_caballus
ENSSSCG00000027826	-	54	61.628	ENSEEUG00000000786	-	97	61.628	Erinaceus_europaeus
ENSSSCG00000027826	-	98	55.696	ENSEEUG00000007079	-	98	55.696	Erinaceus_europaeus
ENSSSCG00000027826	-	93	56.667	ENSEEUG00000012080	-	97	56.667	Erinaceus_europaeus
ENSSSCG00000027826	-	97	57.235	ENSFCAG00000039272	-	95	57.235	Felis_catus
ENSSSCG00000027826	-	97	55.949	ENSFCAG00000041619	-	95	55.949	Felis_catus
ENSSSCG00000027826	-	91	58.163	ENSFDAG00000016925	GIMAP4	93	58.163	Fukomys_damarensis
ENSSSCG00000027826	-	100	57.492	ENSGGOG00000002351	GIMAP4	99	57.492	Gorilla_gorilla
ENSSSCG00000027826	-	93	57.667	ENSHGLG00000013893	GIMAP4	94	57.667	Heterocephalus_glaber_female
ENSSSCG00000027826	-	93	58.000	ENSHGLG00100007039	GIMAP4	94	58.000	Heterocephalus_glaber_male
ENSSSCG00000027826	-	98	59.006	ENSMFAG00000001041	GIMAP4	98	59.006	Macaca_fascicularis
ENSSSCG00000027826	-	98	59.006	ENSMMUG00000011386	GIMAP4	98	59.006	Macaca_mulatta
ENSSSCG00000027826	-	98	59.006	ENSMNEG00000028648	GIMAP4	98	59.006	Macaca_nemestrina
ENSSSCG00000027826	-	97	59.295	ENSMLEG00000030303	GIMAP4	91	63.602	Mandrillus_leucophaeus
ENSSSCG00000027826	-	93	56.376	ENSMAUG00000014099	Gimap4	94	56.376	Mesocricetus_auratus
ENSSSCG00000027826	-	96	55.987	ENSMICG00000038028	GIMAP4	94	55.987	Microcebus_murinus
ENSSSCG00000027826	-	72	62.821	ENSMOCG00000000523	Gimap4	100	62.821	Microtus_ochrogaster
ENSSSCG00000027826	-	98	56.782	MGP_CAROLIEiJ_G0028349	Gimap4	90	65.152	Mus_caroli
ENSSSCG00000027826	-	98	57.325	ENSMUSG00000054435	Gimap4	90	64.646	Mus_musculus
ENSSSCG00000027826	-	98	57.325	MGP_SPRETEiJ_G0029352	Gimap4	90	65.152	Mus_spretus
ENSSSCG00000027826	-	88	51.773	ENSMLUG00000026208	-	97	51.773	Myotis_lucifugus
ENSSSCG00000027826	-	99	48.788	ENSMLUG00000028074	-	99	48.788	Myotis_lucifugus
ENSSSCG00000027826	-	77	51.220	ENSMLUG00000025412	-	85	49.813	Myotis_lucifugus
ENSSSCG00000027826	-	80	53.696	ENSMLUG00000010885	-	92	53.696	Myotis_lucifugus
ENSSSCG00000027826	-	93	54.153	ENSMLUG00000022191	-	99	47.734	Myotis_lucifugus
ENSSSCG00000027826	-	95	51.148	ENSMLUG00000026238	-	97	47.352	Myotis_lucifugus
ENSSSCG00000027826	-	99	57.231	ENSNGAG00000019504	Gimap4	99	57.231	Nannospalax_galili
ENSSSCG00000027826	-	99	55.490	ENSNLEG00000003833	GIMAP4	98	55.490	Nomascus_leucogenys
ENSSSCG00000027826	-	88	52.817	ENSMEUG00000011721	-	97	52.817	Notamacropus_eugenii
ENSSSCG00000027826	-	90	52.069	ENSMEUG00000003459	-	97	52.069	Notamacropus_eugenii
ENSSSCG00000027826	-	96	49.675	ENSOPRG00000013098	GIMAP4	94	49.675	Ochotona_princeps
ENSSSCG00000027826	-	93	54.181	ENSODEG00000011659	GIMAP4	97	54.181	Octodon_degus
ENSSSCG00000027826	-	99	55.692	ENSOGAG00000001580	-	98	55.692	Otolemur_garnettii
ENSSSCG00000027826	-	96	54.969	ENSOGAG00000026711	-	94	54.969	Otolemur_garnettii
ENSSSCG00000027826	-	93	58.000	ENSOGAG00000025737	-	99	58.000	Otolemur_garnettii
ENSSSCG00000027826	-	93	55.705	ENSOGAG00000002647	-	98	55.705	Otolemur_garnettii
ENSSSCG00000027826	-	85	64.835	ENSOARG00000001318	-	95	61.616	Ovis_aries
ENSSSCG00000027826	-	91	64.505	ENSOARG00000001437	-	94	64.505	Ovis_aries
ENSSSCG00000027826	-	99	63.125	ENSOARG00000002143	-	99	63.125	Ovis_aries
ENSSSCG00000027826	-	99	60.938	ENSOARG00000001537	-	99	60.938	Ovis_aries
ENSSSCG00000027826	-	99	59.375	ENSOARG00000001365	-	99	59.375	Ovis_aries
ENSSSCG00000027826	-	99	63.750	ENSOARG00000001492	-	99	63.750	Ovis_aries
ENSSSCG00000027826	-	100	57.492	ENSPPAG00000039067	GIMAP4	99	57.492	Pan_paniscus
ENSSSCG00000027826	-	83	55.273	ENSPPRG00000020973	-	100	55.273	Panthera_pardus
ENSSSCG00000027826	-	60	70.526	ENSPPRG00000024199	-	84	70.526	Panthera_pardus
ENSSSCG00000027826	-	97	56.270	ENSPTIG00000008974	-	93	56.270	Panthera_tigris_altaica
ENSSSCG00000027826	-	60	64.021	ENSPTIG00000012391	-	83	64.021	Panthera_tigris_altaica
ENSSSCG00000027826	-	100	57.492	ENSPTRG00000047736	-	99	57.492	Pan_troglodytes
ENSSSCG00000027826	-	100	57.492	ENSPTRG00000019859	GIMAP4	99	57.492	Pan_troglodytes
ENSSSCG00000027826	-	98	58.182	ENSPANG00000022511	GIMAP4	94	63.100	Papio_anubis
ENSSSCG00000027826	-	90	50.000	ENSPSIG00000000567	-	95	50.000	Pelodiscus_sinensis
ENSSSCG00000027826	-	91	48.684	ENSPSIG00000004902	-	87	48.684	Pelodiscus_sinensis
ENSSSCG00000027826	-	99	54.462	ENSPEMG00000008007	Gimap4	97	66.197	Peromyscus_maniculatus_bairdii
ENSSSCG00000027826	-	87	52.669	ENSPCIG00000026522	-	88	52.669	Phascolarctos_cinereus
ENSSSCG00000027826	-	98	48.438	ENSPCIG00000026520	-	89	48.438	Phascolarctos_cinereus
ENSSSCG00000027826	-	99	49.379	ENSPCIG00000016007	-	97	49.379	Phascolarctos_cinereus
ENSSSCG00000027826	-	99	58.360	ENSPPYG00000018171	GIMAP4	96	58.360	Pongo_abelii
ENSSSCG00000027826	-	98	57.460	ENSPCOG00000022284	GIMAP4	96	57.460	Propithecus_coquereli
ENSSSCG00000027826	-	99	52.795	ENSPVAG00000001212	GIMAP4	99	52.795	Pteropus_vampyrus
ENSSSCG00000027826	-	98	53.503	ENSRNOG00000008369	Gimap4	96	56.051	Rattus_norvegicus
ENSSSCG00000027826	-	98	58.385	ENSRBIG00000028867	GIMAP4	98	58.385	Rhinopithecus_bieti
ENSSSCG00000027826	-	98	58.385	ENSRROG00000043219	GIMAP4	98	58.385	Rhinopithecus_roxellana
ENSSSCG00000027826	-	99	58.824	ENSSBOG00000031262	GIMAP4	98	58.824	Saimiri_boliviensis_boliviensis
ENSSSCG00000027826	-	66	61.236	ENSSHAG00000011315	-	85	52.697	Sarcophilus_harrisii
ENSSSCG00000027826	-	98	48.113	ENSSHAG00000000842	-	97	48.113	Sarcophilus_harrisii
ENSSSCG00000027826	-	92	51.014	ENSSARG00000006448	-	96	51.014	Sorex_araneus
ENSSSCG00000027826	-	94	55.700	ENSSARG00000008956	-	95	55.700	Sorex_araneus
ENSSSCG00000027826	-	80	49.805	ENSSPUG00000012235	-	74	49.805	Sphenodon_punctatus
ENSSSCG00000027826	-	90	48.630	ENSSPUG00000009782	-	90	49.315	Sphenodon_punctatus
ENSSSCG00000027826	-	92	43.438	ENSSPUG00000009775	-	68	48.718	Sphenodon_punctatus
ENSSSCG00000027826	-	95	57.003	ENSTBEG00000016415	GIMAP4	99	57.003	Tupaia_belangeri
ENSSSCG00000027826	-	99	66.875	ENSTTRG00000013056	GIMAP4	99	66.875	Tursiops_truncatus
ENSSSCG00000027826	-	98	56.508	ENSUAMG00000004050	-	97	56.508	Ursus_americanus
ENSSSCG00000027826	-	94	57.096	ENSUAMG00000005488	-	92	57.096	Ursus_americanus
ENSSSCG00000027826	-	71	64.912	ENSUMAG00000000843	GIMAP4	78	64.912	Ursus_maritimus
ENSSSCG00000027826	-	99	57.188	ENSVVUG00000009157	GIMAP4	97	57.188	Vulpes_vulpes