EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000027974 (Gene tree)
Gene ID: 100515004
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L50
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 6420 bases
Position: chr1:243100362-243106781
Accession: 100515004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000020688	Ribosomal_L50	PF10501.9	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000024573	-	2623	XM_003122043	ENSSSCP00000020688	159 (aa)	XP_003122091	I3L9H6

Gene Model

Click here to download ENSSSCG00000027974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000027974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000027974	-	100	57.862	ENSSSCG00000035063	-	100	57.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000027974	-	100	76.101	ENSG00000136897	MRPL50	100	79.874	Homo_sapiens
ENSSSCG00000027974	-	100	81.761	ENSAMEG00000000650	MRPL50	100	81.761	Ailuropoda_melanoleuca
ENSSSCG00000027974	-	80	56.061	ENSAPLG00000000732	MRPL50	98	56.061	Anas_platyrhynchos
ENSSSCG00000027974	-	86	57.143	ENSACAG00000017435	MRPL50	86	57.143	Anolis_carolinensis
ENSSSCG00000027974	-	100	75.472	ENSANAG00000016867	-	100	75.472	Aotus_nancymaae
ENSSSCG00000027974	-	100	76.730	ENSANAG00000000786	-	100	76.730	Aotus_nancymaae
ENSSSCG00000027974	-	100	85.535	ENSBTAG00000008962	MRPL50	100	85.535	Bos_taurus
ENSSSCG00000027974	-	100	77.358	ENSCJAG00000048689	MRPL50	100	77.358	Callithrix_jacchus
ENSSSCG00000027974	-	100	78.616	ENSCAFG00000032597	MRPL50	100	78.616	Canis_familiaris
ENSSSCG00000027974	-	100	79.245	ENSCAFG00020019468	MRPL50	100	79.245	Canis_lupus_dingo
ENSSSCG00000027974	-	100	84.277	ENSCHIG00000015308	MRPL50	100	84.277	Capra_hircus
ENSSSCG00000027974	-	100	78.616	ENSTSYG00000034810	MRPL50	100	78.616	Carlito_syrichta
ENSSSCG00000027974	-	81	81.395	ENSCAPG00000003170	MRPL50	100	81.395	Cavia_aperea
ENSSSCG00000027974	-	100	77.358	ENSCPOG00000034033	MRPL50	100	77.358	Cavia_porcellus
ENSSSCG00000027974	-	100	77.987	ENSCCAG00000033569	MRPL50	100	77.987	Cebus_capucinus
ENSSSCG00000027974	-	100	79.874	ENSCATG00000039456	MRPL50	100	79.874	Cercocebus_atys
ENSSSCG00000027974	-	100	75.472	ENSCLAG00000010221	MRPL50	100	75.472	Chinchilla_lanigera
ENSSSCG00000027974	-	100	79.874	ENSCSAG00000011188	MRPL50	100	79.874	Chlorocebus_sabaeus
ENSSSCG00000027974	-	59	81.915	ENSCHOG00000010657	-	100	81.915	Choloepus_hoffmanni
ENSSSCG00000027974	-	96	55.556	ENSCPBG00000009521	MRPL50	97	55.556	Chrysemys_picta_bellii
ENSSSCG00000027974	-	100	79.245	ENSCANG00000029997	MRPL50	100	79.245	Colobus_angolensis_palliatus
ENSSSCG00000027974	-	100	72.956	ENSCGRG00001023970	Mrpl50	100	72.956	Cricetulus_griseus_chok1gshd
ENSSSCG00000027974	-	100	72.956	ENSCGRG00000003977	Mrpl50	100	72.956	Cricetulus_griseus_crigri
ENSSSCG00000027974	-	100	72.393	ENSDNOG00000035230	MRPL50	100	72.393	Dasypus_novemcinctus
ENSSSCG00000027974	-	100	73.585	ENSDORG00000012829	Mrpl50	100	73.585	Dipodomys_ordii
ENSSSCG00000027974	-	96	73.026	ENSETEG00000001589	MRPL50	94	73.026	Echinops_telfairi
ENSSSCG00000027974	-	100	85.535	ENSEASG00005022900	MRPL50	100	85.535	Equus_asinus_asinus
ENSSSCG00000027974	-	95	71.523	ENSEEUG00000014898	MRPL50	100	71.523	Erinaceus_europaeus
ENSSSCG00000027974	-	100	81.132	ENSFCAG00000030003	MRPL50	100	81.132	Felis_catus
ENSSSCG00000027974	-	80	54.615	ENSFALG00000000234	MRPL50	99	58.716	Ficedula_albicollis
ENSSSCG00000027974	-	100	77.987	ENSFDAG00000008769	MRPL50	76	77.987	Fukomys_damarensis
ENSSSCG00000027974	-	86	52.899	ENSGALG00000015543	MRPL50	91	50.336	Gallus_gallus
ENSSSCG00000027974	-	94	55.629	ENSGAGG00000012487	MRPL50	96	55.629	Gopherus_agassizii
ENSSSCG00000027974	-	100	75.155	ENSGGOG00000009431	MRPL50	100	81.679	Gorilla_gorilla
ENSSSCG00000027974	-	100	64.780	ENSGGOG00000036374	-	94	64.780	Gorilla_gorilla
ENSSSCG00000027974	-	100	81.132	ENSHGLG00000004483	MRPL50	100	81.132	Heterocephalus_glaber_female
ENSSSCG00000027974	-	100	81.132	ENSHGLG00100001750	MRPL50	100	81.132	Heterocephalus_glaber_male
ENSSSCG00000027974	-	100	78.616	ENSSTOG00000026770	MRPL50	100	78.616	Ictidomys_tridecemlineatus
ENSSSCG00000027974	-	100	76.101	ENSJJAG00000015402	Mrpl50	100	76.101	Jaculus_jaculus
ENSSSCG00000027974	-	100	46.541	ENSLACG00000003598	MRPL50	91	46.541	Latimeria_chalumnae
ENSSSCG00000027974	-	100	79.245	ENSLAFG00000031753	MRPL50	100	79.245	Loxodonta_africana
ENSSSCG00000027974	-	100	79.874	ENSMFAG00000000380	MRPL50	100	79.874	Macaca_fascicularis
ENSSSCG00000027974	-	100	79.874	ENSMNEG00000039950	MRPL50	100	79.874	Macaca_nemestrina
ENSSSCG00000027974	-	100	79.874	ENSMLEG00000037472	MRPL50	100	79.874	Mandrillus_leucophaeus
ENSSSCG00000027974	-	83	56.391	ENSMGAG00000016023	MRPL50	96	56.391	Meleagris_gallopavo
ENSSSCG00000027974	-	100	70.440	ENSMAUG00000002882	Mrpl50	100	70.440	Mesocricetus_auratus
ENSSSCG00000027974	-	100	80.503	ENSMICG00000049266	-	100	80.503	Microcebus_murinus
ENSSSCG00000027974	-	100	81.132	ENSMICG00000045179	-	100	81.132	Microcebus_murinus
ENSSSCG00000027974	-	100	78.616	ENSMICG00000045766	-	100	78.616	Microcebus_murinus
ENSSSCG00000027974	-	100	71.875	ENSMOCG00000016919	Mrpl50	100	71.875	Microtus_ochrogaster
ENSSSCG00000027974	-	82	61.069	ENSMODG00000022960	MRPL50	94	61.069	Monodelphis_domestica
ENSSSCG00000027974	-	100	75.472	MGP_CAROLIEiJ_G0026011	Mrpl50	100	75.472	Mus_caroli
ENSSSCG00000027974	-	100	75.472	ENSMUSG00000044018	Mrpl50	100	75.472	Mus_musculus
ENSSSCG00000027974	-	100	75.472	MGP_PahariEiJ_G0028347	Mrpl50	100	75.472	Mus_pahari
ENSSSCG00000027974	-	100	73.585	MGP_SPRETEiJ_G0026974	Mrpl50	100	73.585	Mus_spretus
ENSSSCG00000027974	-	100	81.761	ENSMPUG00000006899	MRPL50	100	81.761	Mustela_putorius_furo
ENSSSCG00000027974	-	100	73.585	ENSMLUG00000006011	MRPL50	100	73.585	Myotis_lucifugus
ENSSSCG00000027974	-	100	74.214	ENSNGAG00000021876	Mrpl50	100	74.214	Nannospalax_galili
ENSSSCG00000027974	-	100	63.522	ENSNLEG00000032422	-	100	63.522	Nomascus_leucogenys
ENSSSCG00000027974	-	100	76.101	ENSNLEG00000017112	MRPL50	100	79.874	Nomascus_leucogenys
ENSSSCG00000027974	-	81	55.814	ENSMEUG00000005656	-	100	55.814	Notamacropus_eugenii
ENSSSCG00000027974	-	100	73.125	ENSOPRG00000015557	-	100	73.125	Ochotona_princeps
ENSSSCG00000027974	-	100	73.585	ENSODEG00000005275	MRPL50	100	73.585	Octodon_degus
ENSSSCG00000027974	-	99	59.494	ENSOANG00000004770	MRPL50	99	59.494	Ornithorhynchus_anatinus
ENSSSCG00000027974	-	100	70.988	ENSOCUG00000006340	MRPL50	100	70.988	Oryctolagus_cuniculus
ENSSSCG00000027974	-	100	79.874	ENSOGAG00000025381	MRPL50	100	79.874	Otolemur_garnettii
ENSSSCG00000027974	-	100	83.648	ENSOARG00000007538	MRPL50	100	83.648	Ovis_aries
ENSSSCG00000027974	-	85	71.111	ENSPPAG00000035776	-	93	71.111	Pan_paniscus
ENSSSCG00000027974	-	100	76.730	ENSPPAG00000027646	MRPL50	100	80.503	Pan_paniscus
ENSSSCG00000027974	-	100	81.132	ENSPPRG00000002099	MRPL50	100	81.132	Panthera_pardus
ENSSSCG00000027974	-	100	81.761	ENSPTIG00000014107	MRPL50	100	81.761	Panthera_tigris_altaica
ENSSSCG00000027974	-	100	76.101	ENSPTRG00000050419	MRPL50	100	79.874	Pan_troglodytes
ENSSSCG00000027974	-	85	71.111	ENSPTRG00000043662	-	93	71.111	Pan_troglodytes
ENSSSCG00000027974	-	100	79.874	ENSPANG00000025676	-	100	79.874	Papio_anubis
ENSSSCG00000027974	-	100	79.874	ENSPANG00000011880	-	100	79.874	Papio_anubis
ENSSSCG00000027974	-	81	61.240	ENSPSIG00000000308	MRPL50	98	61.240	Pelodiscus_sinensis
ENSSSCG00000027974	-	100	75.472	ENSPPYG00000019451	MRPL50	100	79.245	Pongo_abelii
ENSSSCG00000027974	-	81	80.469	ENSPCAG00000006809	MRPL50	100	80.469	Procavia_capensis
ENSSSCG00000027974	-	94	81.333	ENSPVAG00000000934	MRPL50	99	81.333	Pteropus_vampyrus
ENSSSCG00000027974	-	100	74.843	ENSRNOG00000053615	Mrpl50	100	74.843	Rattus_norvegicus
ENSSSCG00000027974	-	100	79.874	ENSRBIG00000037387	MRPL50	100	79.874	Rhinopithecus_bieti
ENSSSCG00000027974	-	100	79.245	ENSRROG00000037165	-	100	79.245	Rhinopithecus_roxellana
ENSSSCG00000027974	-	100	79.874	ENSRROG00000036343	-	100	84.496	Rhinopithecus_roxellana
ENSSSCG00000027974	-	100	76.730	ENSSBOG00000022031	MRPL50	100	76.730	Saimiri_boliviensis_boliviensis
ENSSSCG00000027974	-	81	60.000	ENSSHAG00000012132	-	81	60.000	Sarcophilus_harrisii
ENSSSCG00000027974	-	100	76.101	ENSSARG00000013111	MRPL50	100	76.101	Sorex_araneus
ENSSSCG00000027974	-	86	54.015	ENSSPUG00000008348	MRPL50	87	54.015	Sphenodon_punctatus
ENSSSCG00000027974	-	84	52.899	ENSTGUG00000000649	-	99	52.899	Taeniopygia_guttata
ENSSSCG00000027974	-	79	52.344	ENSTGUG00000014990	-	98	52.344	Taeniopygia_guttata
ENSSSCG00000027974	-	79	51.562	ENSTGUG00000015005	-	98	51.562	Taeniopygia_guttata
ENSSSCG00000027974	-	80	53.077	ENSTGUG00000015014	-	96	53.077	Taeniopygia_guttata
ENSSSCG00000027974	-	81	81.250	ENSTBEG00000004543	-	100	81.250	Tupaia_belangeri
ENSSSCG00000027974	-	81	81.250	ENSTBEG00000009729	-	100	81.250	Tupaia_belangeri
ENSSSCG00000027974	-	81	93.750	ENSTTRG00000014349	MRPL50	100	93.750	Tursiops_truncatus
ENSSSCG00000027974	-	100	83.019	ENSUAMG00000020927	MRPL50	100	83.019	Ursus_americanus
ENSSSCG00000027974	-	100	83.019	ENSUMAG00000012974	MRPL50	100	83.019	Ursus_maritimus
ENSSSCG00000027974	-	100	87.421	ENSVPAG00000002242	MRPL50	100	87.421	Vicugna_pacos
ENSSSCG00000027974	-	100	77.987	ENSVVUG00000019255	MRPL50	100	77.987	Vulpes_vulpes