EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000028033 (Gene tree)
Gene ID: 100153797
Gene Symbol: SECISBP2
Alias: SBP2
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 43960 bases
Position: chr14:912015-955974
Accession: 100153797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027324	Ribosomal_L7Ae	PF01248.26	2e-21	1	1
ENSSSCP00000057805	Ribosomal_L7Ae	PF01248.26	2.1e-21	1	1
ENSSSCP00000010231	Ribosomal_L7Ae	PF01248.26	7.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055634	SECISBP2-202	3420	XM_005670388	ENSSSCP00000057805	848 (aa)	XP_005670445	A0A287BMS4
ENSSSCT00000010504	SECISBP2-203	2353	-	ENSSSCP00000010231	715 (aa)	-	F1RN16
ENSSSCT00000030875	SECISBP2-201	3344	XM_021074249	ENSSSCP00000027324	818 (aa)	XP_020929908	I3LT80

Gene Model

Click here to download ENSSSCG00000028033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000028033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000028033	SECISBP2	100	78.291	ENSG00000187742	SECISBP2	100	78.294	Homo_sapiens
ENSSSCG00000028033	SECISBP2	50	50.943	ENSAPOG00000005939	secisbp2	59	50.734	Acanthochromis_polyacanthus
ENSSSCG00000028033	SECISBP2	99	76.140	ENSAMEG00000003349	SECISBP2	99	76.140	Ailuropoda_melanoleuca
ENSSSCG00000028033	SECISBP2	52	51.754	ENSAOCG00000019052	secisbp2	59	50.417	Amphiprion_ocellaris
ENSSSCG00000028033	SECISBP2	52	51.416	ENSAPEG00000012971	secisbp2	59	50.208	Amphiprion_percula
ENSSSCG00000028033	SECISBP2	72	40.752	ENSATEG00000001095	secisbp2	62	48.992	Anabas_testudineus
ENSSSCG00000028033	SECISBP2	99	41.156	ENSAPLG00000013053	SECISBP2	100	41.156	Anas_platyrhynchos
ENSSSCG00000028033	SECISBP2	82	62.703	ENSACAG00000016594	SECISBP2	78	61.804	Anolis_carolinensis
ENSSSCG00000028033	SECISBP2	100	76.443	ENSANAG00000028208	SECISBP2	100	76.559	Aotus_nancymaae
ENSSSCG00000028033	SECISBP2	52	49.072	ENSACLG00000019976	secisbp2	62	49.072	Astatotilapia_calliptera
ENSSSCG00000028033	SECISBP2	100	84.390	ENSBTAG00000001939	SECISBP2	100	87.010	Bos_taurus
ENSSSCG00000028033	SECISBP2	100	77.252	ENSCJAG00000007806	SECISBP2	100	77.367	Callithrix_jacchus
ENSSSCG00000028033	SECISBP2	100	79.861	ENSCAFG00000002188	SECISBP2	100	79.861	Canis_familiaris
ENSSSCG00000028033	SECISBP2	99	79.812	ENSCAFG00020007224	SECISBP2	99	79.812	Canis_lupus_dingo
ENSSSCG00000028033	SECISBP2	100	84.507	ENSCHIG00000010657	SECISBP2	99	84.507	Capra_hircus
ENSSSCG00000028033	SECISBP2	88	71.745	ENSTSYG00000014119	SECISBP2	97	72.005	Carlito_syrichta
ENSSSCG00000028033	SECISBP2	89	77.719	ENSCAPG00000008522	SECISBP2	99	77.719	Cavia_aperea
ENSSSCG00000028033	SECISBP2	100	73.148	ENSCPOG00000014270	SECISBP2	100	73.148	Cavia_porcellus
ENSSSCG00000028033	SECISBP2	100	77.483	ENSCCAG00000013350	SECISBP2	100	77.483	Cebus_capucinus
ENSSSCG00000028033	SECISBP2	100	78.060	ENSCATG00000008304	SECISBP2	100	78.060	Cercocebus_atys
ENSSSCG00000028033	SECISBP2	100	73.587	ENSCLAG00000001166	SECISBP2	96	73.587	Chinchilla_lanigera
ENSSSCG00000028033	SECISBP2	100	78.637	ENSCSAG00000007310	SECISBP2	100	78.637	Chlorocebus_sabaeus
ENSSSCG00000028033	SECISBP2	85	81.818	ENSCHOG00000011084	SECISBP2	83	81.818	Choloepus_hoffmanni
ENSSSCG00000028033	SECISBP2	50	62.150	ENSCPBG00000005608	SECISBP2	99	55.577	Chrysemys_picta_bellii
ENSSSCG00000028033	SECISBP2	100	73.206	ENSCANG00000034551	SECISBP2	100	77.792	Colobus_angolensis_palliatus
ENSSSCG00000028033	SECISBP2	100	67.128	ENSCGRG00001013930	Secisbp2	100	67.013	Cricetulus_griseus_chok1gshd
ENSSSCG00000028033	SECISBP2	100	67.128	ENSCGRG00000002600	Secisbp2	100	67.013	Cricetulus_griseus_crigri
ENSSSCG00000028033	SECISBP2	50	52.144	ENSCVAG00000015876	secisbp2	58	52.144	Cyprinodon_variegatus
ENSSSCG00000028033	SECISBP2	53	48.971	ENSDARG00000073892	secisbp2	85	49.378	Danio_rerio
ENSSSCG00000028033	SECISBP2	100	76.932	ENSDNOG00000009432	SECISBP2	100	77.047	Dasypus_novemcinctus
ENSSSCG00000028033	SECISBP2	100	74.684	ENSDORG00000023182	Secisbp2	100	74.453	Dipodomys_ordii
ENSSSCG00000028033	SECISBP2	98	66.059	ENSETEG00000001262	SECISBP2	100	63.457	Echinops_telfairi
ENSSSCG00000028033	SECISBP2	100	81.490	ENSEASG00005013960	SECISBP2	100	81.490	Equus_asinus_asinus
ENSSSCG00000028033	SECISBP2	100	81.141	ENSECAG00000015868	SECISBP2	100	81.141	Equus_caballus
ENSSSCG00000028033	SECISBP2	100	73.605	ENSEEUG00000004400	SECISBP2	100	74.070	Erinaceus_europaeus
ENSSSCG00000028033	SECISBP2	100	74.884	ENSFCAG00000004214	SECISBP2	100	75.116	Felis_catus
ENSSSCG00000028033	SECISBP2	99	41.914	ENSFALG00000012441	SECISBP2	69	58.028	Ficedula_albicollis
ENSSSCG00000028033	SECISBP2	100	72.005	ENSFDAG00000021183	SECISBP2	96	72.235	Fukomys_damarensis
ENSSSCG00000028033	SECISBP2	51	48.460	ENSFHEG00000004095	secisbp2	62	48.361	Fundulus_heteroclitus
ENSSSCG00000028033	SECISBP2	81	58.581	ENSGALG00000010694	SECISBP2	71	58.581	Gallus_gallus
ENSSSCG00000028033	SECISBP2	51	50.320	ENSGAFG00000016947	secisbp2	60	50.320	Gambusia_affinis
ENSSSCG00000028033	SECISBP2	51	50.756	ENSGACG00000013757	secisbp2	75	50.756	Gasterosteus_aculeatus
ENSSSCG00000028033	SECISBP2	100	78.291	ENSGGOG00000000453	SECISBP2	100	78.294	Gorilla_gorilla
ENSSSCG00000028033	SECISBP2	100	74.249	ENSHGLG00000014380	SECISBP2	96	74.249	Heterocephalus_glaber_female
ENSSSCG00000028033	SECISBP2	100	74.365	ENSHGLG00100006953	SECISBP2	96	74.365	Heterocephalus_glaber_male
ENSSSCG00000028033	SECISBP2	50	49.478	ENSIPUG00000015393	secisbp2	59	49.478	Ictalurus_punctatus
ENSSSCG00000028033	SECISBP2	100	76.914	ENSSTOG00000000921	SECISBP2	100	76.914	Ictidomys_tridecemlineatus
ENSSSCG00000028033	SECISBP2	100	68.614	ENSJJAG00000020492	Secisbp2	100	68.614	Jaculus_jaculus
ENSSSCG00000028033	SECISBP2	54	51.087	ENSLBEG00000026023	secisbp2	61	50.607	Labrus_bergylta
ENSSSCG00000028033	SECISBP2	50	53.377	ENSLACG00000005735	SECISBP2	87	53.132	Latimeria_chalumnae
ENSSSCG00000028033	SECISBP2	50	52.298	ENSLOCG00000011742	secisbp2	78	52.193	Lepisosteus_oculatus
ENSSSCG00000028033	SECISBP2	100	72.675	ENSLAFG00000012998	SECISBP2	100	72.675	Loxodonta_africana
ENSSSCG00000028033	SECISBP2	100	78.176	ENSMFAG00000003045	SECISBP2	100	78.176	Macaca_fascicularis
ENSSSCG00000028033	SECISBP2	100	78.176	ENSMMUG00000012532	SECISBP2	100	78.176	Macaca_mulatta
ENSSSCG00000028033	SECISBP2	100	77.945	ENSMNEG00000031737	SECISBP2	100	77.945	Macaca_nemestrina
ENSSSCG00000028033	SECISBP2	100	73.206	ENSMLEG00000028868	SECISBP2	100	78.168	Mandrillus_leucophaeus
ENSSSCG00000028033	SECISBP2	52	51.562	ENSMAMG00000006644	secisbp2	60	49.895	Mastacembelus_armatus
ENSSSCG00000028033	SECISBP2	52	49.072	ENSMZEG00005013614	secisbp2	62	49.072	Maylandia_zebra
ENSSSCG00000028033	SECISBP2	100	68.060	ENSMAUG00000008659	Secisbp2	100	67.712	Mesocricetus_auratus
ENSSSCG00000028033	SECISBP2	100	78.777	ENSMICG00000001176	SECISBP2	100	78.777	Microcebus_murinus
ENSSSCG00000028033	SECISBP2	100	68.512	ENSMOCG00000000616	Secisbp2	100	68.397	Microtus_ochrogaster
ENSSSCG00000028033	SECISBP2	100	55.814	ENSMODG00000013365	SECISBP2	100	55.127	Monodelphis_domestica
ENSSSCG00000028033	SECISBP2	83	38.942	ENSMALG00000004907	secisbp2	95	39.147	Monopterus_albus
ENSSSCG00000028033	SECISBP2	100	67.319	MGP_CAROLIEiJ_G0018518	Secisbp2	100	67.204	Mus_caroli
ENSSSCG00000028033	SECISBP2	100	68.506	ENSMUSG00000035139	Secisbp2	100	68.391	Mus_musculus
ENSSSCG00000028033	SECISBP2	100	68.088	MGP_PahariEiJ_G0019584	Secisbp2	100	67.972	Mus_pahari
ENSSSCG00000028033	SECISBP2	100	68.114	MGP_SPRETEiJ_G0019399	Secisbp2	100	68.000	Mus_spretus
ENSSSCG00000028033	SECISBP2	64	76.937	ENSMPUG00000008495	-	100	76.937	Mustela_putorius_furo
ENSSSCG00000028033	SECISBP2	99	75.775	ENSMLUG00000012348	SECISBP2	100	75.775	Myotis_lucifugus
ENSSSCG00000028033	SECISBP2	100	70.127	ENSNGAG00000002364	Secisbp2	100	70.127	Nannospalax_galili
ENSSSCG00000028033	SECISBP2	52	49.281	ENSNBRG00000022804	secisbp2	62	49.281	Neolamprologus_brichardi
ENSSSCG00000028033	SECISBP2	100	73.445	ENSNLEG00000008739	SECISBP2	100	78.419	Nomascus_leucogenys
ENSSSCG00000028033	SECISBP2	55	56.376	ENSMEUG00000003854	-	53	56.376	Notamacropus_eugenii
ENSSSCG00000028033	SECISBP2	96	61.871	ENSOPRG00000007588	SECISBP2	99	61.871	Ochotona_princeps
ENSSSCG00000028033	SECISBP2	100	71.132	ENSODEG00000000675	SECISBP2	100	71.132	Octodon_degus
ENSSSCG00000028033	SECISBP2	50	53.023	ENSONIG00000016931	secisbp2	94	54.865	Oreochromis_niloticus
ENSSSCG00000028033	SECISBP2	100	73.933	ENSOCUG00000012932	SECISBP2	100	74.164	Oryctolagus_cuniculus
ENSSSCG00000028033	SECISBP2	51	50.545	ENSOMEG00000008595	secisbp2	63	50.545	Oryzias_melastigma
ENSSSCG00000028033	SECISBP2	100	77.278	ENSOGAG00000000317	SECISBP2	97	77.278	Otolemur_garnettii
ENSSSCG00000028033	SECISBP2	100	83.818	ENSOARG00000007741	SECISBP2	100	83.818	Ovis_aries
ENSSSCG00000028033	SECISBP2	100	78.291	ENSPPAG00000012385	SECISBP2	100	78.294	Pan_paniscus
ENSSSCG00000028033	SECISBP2	100	75.581	ENSPPRG00000023911	SECISBP2	100	75.814	Panthera_pardus
ENSSSCG00000028033	SECISBP2	99	67.019	ENSPTIG00000009781	SECISBP2	100	67.019	Panthera_tigris_altaica
ENSSSCG00000028033	SECISBP2	100	78.406	ENSPTRG00000021094	SECISBP2	100	78.419	Pan_troglodytes
ENSSSCG00000028033	SECISBP2	100	77.945	ENSPANG00000024873	SECISBP2	100	77.945	Papio_anubis
ENSSSCG00000028033	SECISBP2	73	59.811	ENSPSIG00000016257	SECISBP2	85	61.871	Pelodiscus_sinensis
ENSSSCG00000028033	SECISBP2	100	69.746	ENSPEMG00000020212	Secisbp2	100	69.630	Peromyscus_maniculatus_bairdii
ENSSSCG00000028033	SECISBP2	100	56.575	ENSPCIG00000010304	SECISBP2	93	65.589	Phascolarctos_cinereus
ENSSSCG00000028033	SECISBP2	51	51.092	ENSPFOG00000008146	secisbp2	74	51.092	Poecilia_formosa
ENSSSCG00000028033	SECISBP2	51	49.163	ENSPMEG00000013702	secisbp2	62	49.163	Poecilia_mexicana
ENSSSCG00000028033	SECISBP2	51	49.163	ENSPREG00000008117	secisbp2	62	49.163	Poecilia_reticulata
ENSSSCG00000028033	SECISBP2	100	78.176	ENSPPYG00000019359	SECISBP2	100	78.176	Pongo_abelii
ENSSSCG00000028033	SECISBP2	76	70.072	ENSPCAG00000000559	-	80	67.804	Procavia_capensis
ENSSSCG00000028033	SECISBP2	100	78.431	ENSPCOG00000013354	SECISBP2	100	78.431	Propithecus_coquereli
ENSSSCG00000028033	SECISBP2	98	68.873	ENSPVAG00000011013	SECISBP2	90	69.663	Pteropus_vampyrus
ENSSSCG00000028033	SECISBP2	52	49.072	ENSPNYG00000016799	secisbp2	62	49.072	Pundamilia_nyererei
ENSSSCG00000028033	SECISBP2	51	50.207	ENSPNAG00000029922	secisbp2	65	50.415	Pygocentrus_nattereri
ENSSSCG00000028033	SECISBP2	100	68.627	ENSRNOG00000013773	Secisbp2	100	68.512	Rattus_norvegicus
ENSSSCG00000028033	SECISBP2	100	77.765	ENSRBIG00000044115	SECISBP2	100	77.765	Rhinopithecus_bieti
ENSSSCG00000028033	SECISBP2	100	77.765	ENSRROG00000030742	SECISBP2	100	77.765	Rhinopithecus_roxellana
ENSSSCG00000028033	SECISBP2	80	81.212	ENSSBOG00000015392	SECISBP2	92	81.212	Saimiri_boliviensis_boliviensis
ENSSSCG00000028033	SECISBP2	100	58.696	ENSSHAG00000005947	SECISBP2	100	58.810	Sarcophilus_harrisii
ENSSSCG00000028033	SECISBP2	50	48.381	ENSSFOG00015010409	secisbp2	57	48.381	Scleropages_formosus
ENSSSCG00000028033	SECISBP2	54	50.947	ENSSMAG00000008472	secisbp2	76	50.598	Scophthalmus_maximus
ENSSSCG00000028033	SECISBP2	52	49.296	ENSSDUG00000002089	secisbp2	62	50.000	Seriola_dumerili
ENSSSCG00000028033	SECISBP2	52	49.497	ENSSLDG00000003510	secisbp2	61	49.497	Seriola_lalandi_dorsalis
ENSSSCG00000028033	SECISBP2	96	59.110	ENSSARG00000012518	-	82	59.110	Sorex_araneus
ENSSSCG00000028033	SECISBP2	88	57.768	ENSSPUG00000009635	SECISBP2	89	59.397	Sphenodon_punctatus
ENSSSCG00000028033	SECISBP2	50	50.208	ENSSPAG00000013606	secisbp2	59	50.208	Stegastes_partitus
ENSSSCG00000028033	SECISBP2	53	57.928	ENSTGUG00000000440	SECISBP2	87	57.928	Taeniopygia_guttata
ENSSSCG00000028033	SECISBP2	54	50.208	ENSTNIG00000015576	secisbp2	95	50.972	Tetraodon_nigroviridis
ENSSSCG00000028033	SECISBP2	82	73.333	ENSTBEG00000000288	SECISBP2	84	73.333	Tupaia_belangeri
ENSSSCG00000028033	SECISBP2	100	86.486	ENSTTRG00000003339	SECISBP2	98	86.486	Tursiops_truncatus
ENSSSCG00000028033	SECISBP2	100	78.165	ENSUAMG00000016243	SECISBP2	100	78.165	Ursus_americanus
ENSSSCG00000028033	SECISBP2	99	76.706	ENSUMAG00000016261	SECISBP2	99	76.706	Ursus_maritimus
ENSSSCG00000028033	SECISBP2	99	76.174	ENSVVUG00000022278	SECISBP2	99	76.174	Vulpes_vulpes
ENSSSCG00000028033	SECISBP2	54	52.066	ENSXETG00000029955	SECISBP2	86	53.053	Xenopus_tropicalis
ENSSSCG00000028033	SECISBP2	51	49.372	ENSXMAG00000003090	secisbp2	61	49.372	Xiphophorus_maculatus