EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000028516 (Gene tree)
Gene ID
100626466
Gene Symbol
LARP4
Alias
PP13296
Full Name
La ribonucleoprotein domain family member 4
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
68607 bases
Position
chr5:16284949-16353555
Accession
100626466
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000029100LaPF05383.178.6e-1711
ENSSSCP00000024908LaPF05383.179.8e-1711
ENSSSCP00000030599LaPF05383.179.8e-1711
ENSSSCP00000000231LaPF05383.171.1e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000000235LARP4-2016662XM_003355385ENSSSCP00000000231725 (aa)XP_003355433F1SH87
ENSSSCT00000025921LARP4-2026506XM_005653121ENSSSCP00000024908662 (aa)XP_005653178I3LLE0
ENSSSCT00000034406LARP4-2043462XM_021091651ENSSSCP00000030599662 (aa)XP_020947310I3LLE0
ENSSSCT00000034524LARP4-2036317XM_021091647ENSSSCP00000029100608 (aa)XP_020947306K7GMK7
Gene Model
Click here to download ENSSSCG00000028516's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000028516's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000028516LARP49937.234ENSSSCG00000011162LARP4B9335.771
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000028516LARP49793.404ENSG00000161813LARP410096.800Homo_sapiens
ENSSSCG00000028516LARP49950.631ENSAPOG00000007142larp4aa9547.859Acanthochromis_polyacanthus
ENSSSCG00000028516LARP49946.536ENSAPOG00000021331larp4ab9945.736Acanthochromis_polyacanthus
ENSSSCG00000028516LARP410092.749ENSAMEG00000001275LARP410092.531Ailuropoda_melanoleuca
ENSSSCG00000028516LARP47166.361ENSACIG00000001198larp4aa7782.014Amphilophus_citrinellus
ENSSSCG00000028516LARP49945.466ENSAOCG00000006387larp4ab9944.545Amphiprion_ocellaris
ENSSSCG00000028516LARP49949.654ENSAOCG00000002408larp4aa6366.667Amphiprion_ocellaris
ENSSSCG00000028516LARP45159.677ENSAPEG00000015441larp4ab9859.677Amphiprion_percula
ENSSSCG00000028516LARP49949.793ENSAPEG00000019058larp4aa6366.972Amphiprion_percula
ENSSSCG00000028516LARP49942.490ENSATEG00000001018larp4ab9943.247Anabas_testudineus
ENSSSCG00000028516LARP49950.000ENSATEG00000020715larp4aa5766.361Anabas_testudineus
ENSSSCG00000028516LARP49778.182ENSAPLG00000013661LARP49970.204Anas_platyrhynchos
ENSSSCG00000028516LARP49776.302ENSACAG00000017133LARP49765.625Anolis_carolinensis
ENSSSCG00000028516LARP49792.348ENSANAG00000029342LARP49793.067Aotus_nancymaae
ENSSSCG00000028516LARP48255.609ENSACLG00000002575larp4aa7355.056Astatotilapia_calliptera
ENSSSCG00000028516LARP45156.041ENSACLG00000000777larp4ab9956.041Astatotilapia_calliptera
ENSSSCG00000028516LARP49265.698ENSAMXG00000036493larp4aa9451.702Astyanax_mexicanus
ENSSSCG00000028516LARP49946.325ENSAMXG00000001515larp4ab9546.736Astyanax_mexicanus
ENSSSCG00000028516LARP410091.689ENSBTAG00000017164LARP410091.689Bos_taurus
ENSSSCG00000028516LARP49792.084ENSCJAG00000021131LARP49793.067Callithrix_jacchus
ENSSSCG00000028516LARP49795.767ENSCAFG00000008174LARP410091.701Canis_familiaris
ENSSSCG00000028516LARP49795.767ENSCAFG00020014554LARP410091.724Canis_lupus_dingo
ENSSSCG00000028516LARP410091.417ENSCHIG00000025965LARP410091.417Capra_hircus
ENSSSCG00000028516LARP49793.931ENSTSYG00000004342LARP49794.667Carlito_syrichta
ENSSSCG00000028516LARP410066.817ENSCAPG00000012942LARP410067.507Cavia_aperea
ENSSSCG00000028516LARP410081.956ENSCPOG00000020519LARP410081.956Cavia_porcellus
ENSSSCG00000028516LARP410088.567ENSCCAG00000024439LARP49793.067Cebus_capucinus
ENSSSCG00000028516LARP49790.476ENSCATG00000044528LARP410087.917Cercocebus_atys
ENSSSCG00000028516LARP410086.576ENSCLAG00000001829LARP410086.464Chinchilla_lanigera
ENSSSCG00000028516LARP45991.418ENSCHOG00000010490-5891.418Choloepus_hoffmanni
ENSSSCG00000028516LARP410072.418ENSCPBG00000019407LARP49172.147Chrysemys_picta_bellii
ENSSSCG00000028516LARP49793.915ENSCANG00000029159-9794.933Colobus_angolensis_palliatus
ENSSSCG00000028516LARP410080.579ENSCANG00000033097-10084.848Colobus_angolensis_palliatus
ENSSSCG00000028516LARP410085.068ENSCGRG00001010818Larp410084.986Cricetulus_griseus_chok1gshd
ENSSSCG00000028516LARP410085.068ENSCGRG00000009382Larp410084.979Cricetulus_griseus_crigri
ENSSSCG00000028516LARP46564.094ENSCSEG00000003240larp4ab9443.944Cynoglossus_semilaevis
ENSSSCG00000028516LARP49166.772ENSCSEG00000001963larp4aa8363.255Cynoglossus_semilaevis
ENSSSCG00000028516LARP410047.429ENSDARG00000074979larp4ab8578.146Danio_rerio
ENSSSCG00000028516LARP49946.855ENSDARG00000078401larp4aa9546.632Danio_rerio
ENSSSCG00000028516LARP49793.668ENSDNOG00000038525LARP410089.532Dasypus_novemcinctus
ENSSSCG00000028516LARP410086.226ENSDORG00000004013Larp410086.226Dipodomys_ordii
ENSSSCG00000028516LARP47278.491ENSETEG00000011683LARP47378.491Echinops_telfairi
ENSSSCG00000028516LARP46745.000ENSEBUG00000004426LARP49241.481Eptatretus_burgeri
ENSSSCG00000028516LARP49036.568ENSEBUG00000010394LARP49138.748Eptatretus_burgeri
ENSSSCG00000028516LARP410091.088ENSEASG00005004356LARP410096.537Equus_asinus_asinus
ENSSSCG00000028516LARP410093.807ENSECAG00000012479LARP410093.807Equus_caballus
ENSSSCG00000028516LARP476100.000ENSEEUG00000000316LARP476100.000Erinaceus_europaeus
ENSSSCG00000028516LARP49945.415ENSELUG00000000395larp4aa8658.122Esox_lucius
ENSSSCG00000028516LARP47376.106ENSELUG00000018650larp4ab8476.106Esox_lucius
ENSSSCG00000028516LARP410093.421ENSFCAG00000031897LARP410095.989Felis_catus
ENSSSCG00000028516LARP48666.719ENSFALG00000002114LARP49868.308Ficedula_albicollis
ENSSSCG00000028516LARP410086.777ENSFDAG00000006406-10086.777Fukomys_damarensis
ENSSSCG00000028516LARP49944.357ENSFHEG00000013854larp4ab9943.758Fundulus_heteroclitus
ENSSSCG00000028516LARP48754.762ENSFHEG00000004338larp4aa5766.154Fundulus_heteroclitus
ENSSSCG00000028516LARP49163.988ENSGMOG00000008246larp4aa9548.752Gadus_morhua
ENSSSCG00000028516LARP49178.442ENSGALG00000042122LARP49369.516Gallus_gallus
ENSSSCG00000028516LARP49845.812ENSGAFG00000021777larp4ab9945.191Gambusia_affinis
ENSSSCG00000028516LARP49944.920ENSGACG00000000680larp4ab9945.007Gasterosteus_aculeatus
ENSSSCG00000028516LARP48866.564ENSGACG00000008381larp4aa9964.021Gasterosteus_aculeatus
ENSSSCG00000028516LARP410071.196ENSGAGG00000006969LARP410070.924Gopherus_agassizii
ENSSSCG00000028516LARP410084.465ENSGGOG00000015230LARP49993.817Gorilla_gorilla
ENSSSCG00000028516LARP48255.609ENSHBUG00000023074larp4aa7355.056Haplochromis_burtoni
ENSSSCG00000028516LARP48792.084ENSHGLG00000005513-10086.145Heterocephalus_glaber_female
ENSSSCG00000028516LARP46472.890ENSHGLG00000010979-9376.244Heterocephalus_glaber_female
ENSSSCG00000028516LARP49480.645ENSHGLG00000013875-10079.516Heterocephalus_glaber_female
ENSSSCG00000028516LARP46472.890ENSHGLG00100002832-9376.244Heterocephalus_glaber_male
ENSSSCG00000028516LARP410080.845ENSHGLG00100011678-10080.276Heterocephalus_glaber_male
ENSSSCG00000028516LARP410086.207ENSHGLG00100016984-10086.027Heterocephalus_glaber_male
ENSSSCG00000028516LARP410047.759ENSHCOG00000015951larp4aa9547.876Hippocampus_comes
ENSSSCG00000028516LARP49941.524ENSHCOG00000020857larp4ab9941.656Hippocampus_comes
ENSSSCG00000028516LARP49261.972ENSIPUG00000007514larp4aa9548.586Ictalurus_punctatus
ENSSSCG00000028516LARP410047.067ENSIPUG00000021659larp4ab10046.996Ictalurus_punctatus
ENSSSCG00000028516LARP49792.876ENSSTOG00000003553LARP410089.256Ictidomys_tridecemlineatus
ENSSSCG00000028516LARP45167.823ENSJJAG00000014649-9587.619Jaculus_jaculus
ENSSSCG00000028516LARP49944.792ENSKMAG00000018556larp4ab9944.488Kryptolebias_marmoratus
ENSSSCG00000028516LARP49948.948ENSKMAG00000006800larp4aa5867.178Kryptolebias_marmoratus
ENSSSCG00000028516LARP47666.769ENSLBEG00000014537larp4aa8262.827Labrus_bergylta
ENSSSCG00000028516LARP49942.583ENSLBEG00000019306larp4ab9943.855Labrus_bergylta
ENSSSCG00000028516LARP49959.531ENSLACG00000019090LARP49958.155Latimeria_chalumnae
ENSSSCG00000028516LARP49953.531ENSLOCG00000007113larp4ab9552.480Lepisosteus_oculatus
ENSSSCG00000028516LARP49793.668ENSLAFG00000005160LARP410089.394Loxodonta_africana
ENSSSCG00000028516LARP49794.180ENSMFAG00000043681LARP49794.933Macaca_fascicularis
ENSSSCG00000028516LARP49794.180ENSMMUG00000008172LARP49794.933Macaca_mulatta
ENSSSCG00000028516LARP48584.568ENSMNEG00000037799-9384.568Macaca_nemestrina
ENSSSCG00000028516LARP49794.180ENSMNEG00000034602LARP410088.262Macaca_nemestrina
ENSSSCG00000028516LARP49794.180ENSMLEG00000039661LARP49794.933Mandrillus_leucophaeus
ENSSSCG00000028516LARP49944.678ENSMAMG00000002616larp4ab9944.768Mastacembelus_armatus
ENSSSCG00000028516LARP48956.501ENSMAMG00000011206larp4aa6366.667Mastacembelus_armatus
ENSSSCG00000028516LARP48255.847ENSMZEG00005001813larp4aa7355.056Maylandia_zebra
ENSSSCG00000028516LARP45155.527ENSMZEG00005007771larp4ab9955.784Maylandia_zebra
ENSSSCG00000028516LARP49178.442ENSMGAG00000010598LARP49369.132Meleagris_gallopavo
ENSSSCG00000028516LARP49588.924ENSMICG00000012388-9988.924Microcebus_murinus
ENSSSCG00000028516LARP410084.917ENSMICG00000030156-8796.429Microcebus_murinus
ENSSSCG00000028516LARP410084.615ENSMOCG00000020635Larp410084.573Microtus_ochrogaster
ENSSSCG00000028516LARP49942.348ENSMMOG00000021861larp4ab9253.444Mola_mola
ENSSSCG00000028516LARP49355.181ENSMMOG00000004785larp4aa6662.270Mola_mola
ENSSSCG00000028516LARP49574.581MGP_CAROLIEiJ_G0020281Larp48590.000Mus_caroli
ENSSSCG00000028516LARP410084.615ENSMUSG00000023025Larp410084.615Mus_musculus
ENSSSCG00000028516LARP410085.520MGP_PahariEiJ_G0020284Larp410085.262Mus_pahari
ENSSSCG00000028516LARP410092.296ENSMPUG00000008706LARP49792.105Mustela_putorius_furo
ENSSSCG00000028516LARP49793.386ENSMLUG00000012513-10089.271Myotis_lucifugus
ENSSSCG00000028516LARP410083.710ENSNGAG00000001577-10083.333Nannospalax_galili
ENSSSCG00000028516LARP49948.209ENSNBRG00000011292larp4aa7355.056Neolamprologus_brichardi
ENSSSCG00000028516LARP45155.091ENSNBRG00000015675larp4ab9955.091Neolamprologus_brichardi
ENSSSCG00000028516LARP49793.668ENSNLEG00000017798LARP49794.133Nomascus_leucogenys
ENSSSCG00000028516LARP46674.297ENSOPRG00000004592-7874.297Ochotona_princeps
ENSSSCG00000028516LARP410083.358ENSODEG00000009770LARP410083.264Octodon_degus
ENSSSCG00000028516LARP48568.167ENSONIG00000011895larp4aa9949.545Oreochromis_niloticus
ENSSSCG00000028516LARP49944.517ENSONIG00000019124larp4ab10044.386Oreochromis_niloticus
ENSSSCG00000028516LARP47371.904ENSOANG00000004373LARP49771.904Ornithorhynchus_anatinus
ENSSSCG00000028516LARP410087.481ENSOCUG00000021417-10087.328Oryctolagus_cuniculus
ENSSSCG00000028516LARP410088.421ENSOCUG00000026872-10086.538Oryctolagus_cuniculus
ENSSSCG00000028516LARP49858.333ENSORLG00000006758larp4aa9548.568Oryzias_latipes
ENSSSCG00000028516LARP49950.635ENSORLG00020010258larp4aa6167.391Oryzias_latipes_hni
ENSSSCG00000028516LARP49860.099ENSORLG00015002292larp4aa9549.089Oryzias_latipes_hsok
ENSSSCG00000028516LARP49950.217ENSOMEG00000019749larp4aa9666.389Oryzias_melastigma
ENSSSCG00000028516LARP47188.439ENSOGAG00000001415LARP410088.439Otolemur_garnettii
ENSSSCG00000028516LARP410091.505ENSOARG00000017702LARP410090.872Ovis_aries
ENSSSCG00000028516LARP46273.789ENSPPAG00000039122-9678.398Pan_paniscus
ENSSSCG00000028516LARP410090.312ENSPPAG00000035100LARP49793.600Pan_paniscus
ENSSSCG00000028516LARP410093.241ENSPPRG00000004522LARP410095.989Panthera_pardus
ENSSSCG00000028516LARP410093.241ENSPTIG00000015617LARP410095.989Panthera_tigris_altaica
ENSSSCG00000028516LARP49793.668ENSPTRG00000004935LARP49793.867Pan_troglodytes
ENSSSCG00000028516LARP46273.348ENSPTRG00000045907-9979.156Pan_troglodytes
ENSSSCG00000028516LARP49794.444ENSPANG00000022964LARP49794.933Papio_anubis
ENSSSCG00000028516LARP410050.062ENSPKIG00000005950larp4ab10048.878Paramormyrops_kingsleyae
ENSSSCG00000028516LARP49678.385ENSPSIG00000015867LARP49969.357Pelodiscus_sinensis
ENSSSCG00000028516LARP45053.887ENSPMGG00000002719larp4ab9854.424Periophthalmus_magnuspinnatus
ENSSSCG00000028516LARP49979.780ENSPEMG00000018433Larp49485.877Peromyscus_maniculatus_bairdii
ENSSSCG00000028516LARP49782.031ENSPCIG00000000384LARP410075.782Phascolarctos_cinereus
ENSSSCG00000028516LARP49845.718ENSPFOG00000009764larp4ab9945.323Poecilia_formosa
ENSSSCG00000028516LARP49949.233ENSPFOG00000013148larp4aa10046.549Poecilia_formosa
ENSSSCG00000028516LARP49845.191ENSPLAG00000008502larp4ab9945.191Poecilia_latipinna
ENSSSCG00000028516LARP49949.233ENSPLAG00000013626larp4aa6966.769Poecilia_latipinna
ENSSSCG00000028516LARP49948.757ENSPMEG00000014271larp4aa6966.769Poecilia_mexicana
ENSSSCG00000028516LARP49845.669ENSPMEG00000002720larp4ab9945.538Poecilia_mexicana
ENSSSCG00000028516LARP48566.769ENSPREG00000022597larp4aa9549.418Poecilia_reticulata
ENSSSCG00000028516LARP45158.621ENSPREG00000016263larp4ab9956.225Poecilia_reticulata
ENSSSCG00000028516LARP47191.489ENSPPYG00000004512-10091.489Pongo_abelii
ENSSSCG00000028516LARP410080.845ENSPCAG00000003671LARP49980.626Procavia_capensis
ENSSSCG00000028516LARP48794.212ENSPCOG00000026291LARP49793.067Propithecus_coquereli
ENSSSCG00000028516LARP410081.420ENSPVAG00000016840LARP49181.343Pteropus_vampyrus
ENSSSCG00000028516LARP48255.609ENSPNYG00000022265larp4aa7355.056Pundamilia_nyererei
ENSSSCG00000028516LARP49651.029ENSPNAG00000024770larp4aa9451.286Pygocentrus_nattereri
ENSSSCG00000028516LARP49948.085ENSPNAG00000014478larp4ab10047.254Pygocentrus_nattereri
ENSSSCG00000028516LARP48980.890ENSRBIG00000036890-10080.890Rhinopithecus_bieti
ENSSSCG00000028516LARP49095.820ENSRBIG00000038857-9993.439Rhinopithecus_bieti
ENSSSCG00000028516LARP49794.180ENSRROG00000042764-9993.665Rhinopithecus_roxellana
ENSSSCG00000028516LARP410080.303ENSRROG00000025487-10081.152Rhinopithecus_roxellana
ENSSSCG00000028516LARP49692.742ENSSBOG00000026650LARP49792.800Saimiri_boliviensis_boliviensis
ENSSSCG00000028516LARP45683.721ENSSHAG00000013246-9983.824Sarcophilus_harrisii
ENSSSCG00000028516LARP410047.754ENSSFOG00015014096larp4ab10048.395Scleropages_formosus
ENSSSCG00000028516LARP48867.552ENSSFOG00015003868larp4aa10049.607Scleropages_formosus
ENSSSCG00000028516LARP49949.519ENSSMAG00000019473larp4aa5866.972Scophthalmus_maximus
ENSSSCG00000028516LARP49946.898ENSSMAG00000002838larp4ab9946.606Scophthalmus_maximus
ENSSSCG00000028516LARP47966.452ENSSDUG00000006655larp4ab9945.971Seriola_dumerili
ENSSSCG00000028516LARP48165.109ENSSLDG00000001791larp4ab9946.396Seriola_lalandi_dorsalis
ENSSSCG00000028516LARP47766.667ENSSLDG00000004942larp4aa5766.667Seriola_lalandi_dorsalis
ENSSSCG00000028516LARP49791.005ENSSARG00000012469LARP410082.069Sorex_araneus
ENSSSCG00000028516LARP49175.457ENSSPUG00000016552LARP49366.809Sphenodon_punctatus
ENSSSCG00000028516LARP48858.730ENSSPAG00000002172larp4ab9944.901Stegastes_partitus
ENSSSCG00000028516LARP49948.791ENSSPAG00000007222larp4aa9962.133Stegastes_partitus
ENSSSCG00000028516LARP49675.916ENSTGUG00000003479LARP410068.622Taeniopygia_guttata
ENSSSCG00000028516LARP49944.118ENSTRUG00000007206larp4ab5968.727Takifugu_rubripes
ENSSSCG00000028516LARP45164.194ENSTRUG00000015939larp4aa10060.000Takifugu_rubripes
ENSSSCG00000028516LARP49948.780ENSTNIG00000015109larp4aa6464.110Tetraodon_nigroviridis
ENSSSCG00000028516LARP49944.920ENSTNIG00000014571larp4ab9944.846Tetraodon_nigroviridis
ENSSSCG00000028516LARP49977.793ENSTBEG00000005167LARP410077.793Tupaia_belangeri
ENSSSCG00000028516LARP49796.063ENSTTRG00000003764LARP49991.096Tursiops_truncatus
ENSSSCG00000028516LARP47293.487ENSUAMG00000013764LARP49995.465Ursus_americanus
ENSSSCG00000028516LARP49795.767ENSUMAG00000008473LARP410092.690Ursus_maritimus
ENSSSCG00000028516LARP410091.592ENSVPAG00000010136LARP410090.612Vicugna_pacos
ENSSSCG00000028516LARP49796.032ENSVVUG00000024717LARP410092.270Vulpes_vulpes
ENSSSCG00000028516LARP49267.866ENSXETG00000007283larp410060.115Xenopus_tropicalis
ENSSSCG00000028516LARP49948.889ENSXCOG00000006387larp4aa9546.076Xiphophorus_couchianus
ENSSSCG00000028516LARP45158.047ENSXCOG00000019635larp4ab9658.047Xiphophorus_couchianus
ENSSSCG00000028516LARP48566.769ENSXMAG00000010519larp4aa9546.970Xiphophorus_maculatus
ENSSSCG00000028516LARP49845.767ENSXMAG00000002156larp4ab9945.238Xiphophorus_maculatus

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