EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000028602 (Gene tree)
Gene ID: 100625226
Gene Symbol: GTPBP4
Alias: CRFG|FLJ10686|FLJ10690|NGB|NOG1
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 18688 bases
Position: chr10:68547319-68566006
Accession: 100625226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024246	NOG1	PF06858.14	3.1e-26	1	1
ENSSSCP00000024246	MMR_HSR1	PF01926.23	6.3e-18	1	1
ENSSSCP00000024246	NOGCT	PF08155.11	8.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000023947	GTPBP4-201	2491	XM_003357790	ENSSSCP00000024246	634 (aa)	XP_003357838	I3LJI6

Gene Model

Click here to download ENSSSCG00000028602's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000028602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000028602	GTPBP4	100	91.640	ENSG00000107937	GTPBP4	100	98.571	Homo_sapiens
ENSSSCG00000028602	GTPBP4	100	81.703	ENSAPOG00000020433	gtpbp4	100	78.268	Acanthochromis_polyacanthus
ENSSSCG00000028602	GTPBP4	100	91.325	ENSAMEG00000001845	GTPBP4	100	91.325	Ailuropoda_melanoleuca
ENSSSCG00000028602	GTPBP4	100	77.918	ENSACIG00000018629	gtpbp4	100	77.918	Amphilophus_citrinellus
ENSSSCG00000028602	GTPBP4	100	81.703	ENSAOCG00000000427	gtpbp4	93	81.703	Amphiprion_ocellaris
ENSSSCG00000028602	GTPBP4	100	81.861	ENSAPEG00000002544	gtpbp4	100	81.861	Amphiprion_percula
ENSSSCG00000028602	GTPBP4	100	81.861	ENSATEG00000012635	gtpbp4	95	81.861	Anabas_testudineus
ENSSSCG00000028602	GTPBP4	52	79.154	ENSAPLG00000013790	-	100	79.154	Anas_platyrhynchos
ENSSSCG00000028602	GTPBP4	100	82.492	ENSACAG00000002943	GTPBP4	100	82.492	Anolis_carolinensis
ENSSSCG00000028602	GTPBP4	99	79.589	ENSANAG00000022188	-	99	79.430	Aotus_nancymaae
ENSSSCG00000028602	GTPBP4	87	82.948	ENSANAG00000029209	-	100	82.948	Aotus_nancymaae
ENSSSCG00000028602	GTPBP4	71	85.938	ENSACLG00000026330	gtpbp4	92	92.667	Astatotilapia_calliptera
ENSSSCG00000028602	GTPBP4	100	80.442	ENSAMXG00000019771	gtpbp4	100	80.442	Astyanax_mexicanus
ENSSSCG00000028602	GTPBP4	100	93.218	ENSBTAG00000014917	GTPBP4	100	93.218	Bos_taurus
ENSSSCG00000028602	GTPBP4	99	53.207	WBGene00020297	nog-1	99	52.907	Caenorhabditis_elegans
ENSSSCG00000028602	GTPBP4	100	90.409	ENSCJAG00000022962	-	100	90.409	Callithrix_jacchus
ENSSSCG00000028602	GTPBP4	100	91.824	ENSCJAG00000008494	-	100	91.824	Callithrix_jacchus
ENSSSCG00000028602	GTPBP4	93	91.993	ENSCAFG00000005536	GTPBP4	100	91.993	Canis_familiaris
ENSSSCG00000028602	GTPBP4	100	92.429	ENSCAFG00020004307	GTPBP4	100	92.429	Canis_lupus_dingo
ENSSSCG00000028602	GTPBP4	100	93.060	ENSCHIG00000018346	GTPBP4	100	93.060	Capra_hircus
ENSSSCG00000028602	GTPBP4	100	91.798	ENSTSYG00000004977	GTPBP4	100	91.798	Carlito_syrichta
ENSSSCG00000028602	GTPBP4	99	78.939	ENSCAPG00000002134	GTPBP4	99	78.939	Cavia_aperea
ENSSSCG00000028602	GTPBP4	100	90.694	ENSCPOG00000013736	GTPBP4	100	90.694	Cavia_porcellus
ENSSSCG00000028602	GTPBP4	100	68.770	ENSCCAG00000030115	-	100	68.770	Cebus_capucinus
ENSSSCG00000028602	GTPBP4	99	91.627	ENSCCAG00000021627	-	92	91.785	Cebus_capucinus
ENSSSCG00000028602	GTPBP4	100	92.114	ENSCATG00000004303	GTPBP4	100	92.114	Cercocebus_atys
ENSSSCG00000028602	GTPBP4	100	90.852	ENSCLAG00000011323	GTPBP4	100	90.852	Chinchilla_lanigera
ENSSSCG00000028602	GTPBP4	100	92.271	ENSCSAG00000014097	GTPBP4	100	92.271	Chlorocebus_sabaeus
ENSSSCG00000028602	GTPBP4	96	94.879	ENSCHOG00000012602	GTPBP4	88	94.879	Choloepus_hoffmanni
ENSSSCG00000028602	GTPBP4	100	84.069	ENSCPBG00000008398	GTPBP4	100	84.069	Chrysemys_picta_bellii
ENSSSCG00000028602	GTPBP4	100	63.101	ENSCING00000001957	-	100	63.721	Ciona_intestinalis
ENSSSCG00000028602	GTPBP4	100	62.100	ENSCSAVG00000009793	-	99	78.317	Ciona_savignyi
ENSSSCG00000028602	GTPBP4	100	88.383	ENSCANG00000014168	GTPBP4	100	88.383	Colobus_angolensis_palliatus
ENSSSCG00000028602	GTPBP4	100	91.798	ENSCGRG00001013765	Gtpbp4	100	91.798	Cricetulus_griseus_chok1gshd
ENSSSCG00000028602	GTPBP4	100	91.798	ENSCGRG00000012171	Gtpbp4	100	91.798	Cricetulus_griseus_crigri
ENSSSCG00000028602	GTPBP4	100	76.814	ENSCSEG00000007352	gtpbp4	100	76.814	Cynoglossus_semilaevis
ENSSSCG00000028602	GTPBP4	100	79.811	ENSCVAG00000008993	gtpbp4	100	79.811	Cyprinodon_variegatus
ENSSSCG00000028602	GTPBP4	100	80.757	ENSDARG00000018961	gtpbp4	100	80.757	Danio_rerio
ENSSSCG00000028602	GTPBP4	67	88.000	ENSDNOG00000006746	GTPBP4	100	88.000	Dasypus_novemcinctus
ENSSSCG00000028602	GTPBP4	82	100.000	ENSDORG00000010884	Gtpbp4	96	100.000	Dipodomys_ordii
ENSSSCG00000028602	GTPBP4	100	59.574	FBgn0028473	Non1	100	59.361	Drosophila_melanogaster
ENSSSCG00000028602	GTPBP4	74	85.714	ENSETEG00000016840	-	71	85.714	Echinops_telfairi
ENSSSCG00000028602	GTPBP4	99	63.317	ENSEBUG00000010311	gtpbp4	99	60.918	Eptatretus_burgeri
ENSSSCG00000028602	GTPBP4	100	92.587	ENSEASG00005019082	GTPBP4	100	92.587	Equus_asinus_asinus
ENSSSCG00000028602	GTPBP4	100	92.587	ENSECAG00000001700	GTPBP4	100	92.587	Equus_caballus
ENSSSCG00000028602	GTPBP4	100	93.531	ENSEEUG00000009889	GTPBP4	91	93.531	Erinaceus_europaeus
ENSSSCG00000028602	GTPBP4	100	80.346	ENSELUG00000008578	gtpbp4	96	81.336	Esox_lucius
ENSSSCG00000028602	GTPBP4	100	92.587	ENSFCAG00000026213	GTPBP4	100	92.587	Felis_catus
ENSSSCG00000028602	GTPBP4	99	84.469	ENSFALG00000006971	GTPBP4	87	85.647	Ficedula_albicollis
ENSSSCG00000028602	GTPBP4	100	91.483	ENSFDAG00000000998	GTPBP4	100	91.483	Fukomys_damarensis
ENSSSCG00000028602	GTPBP4	100	80.599	ENSFHEG00000012922	gtpbp4	100	80.599	Fundulus_heteroclitus
ENSSSCG00000028602	GTPBP4	100	79.338	ENSGMOG00000016090	gtpbp4	100	79.338	Gadus_morhua
ENSSSCG00000028602	GTPBP4	100	85.489	ENSGALG00000006703	GTPBP4	100	85.489	Gallus_gallus
ENSSSCG00000028602	GTPBP4	100	81.388	ENSGAFG00000002075	gtpbp4	100	81.388	Gambusia_affinis
ENSSSCG00000028602	GTPBP4	100	80.442	ENSGACG00000017481	gtpbp4	100	80.442	Gasterosteus_aculeatus
ENSSSCG00000028602	GTPBP4	93	83.816	ENSGAGG00000018689	GTPBP4	100	83.816	Gopherus_agassizii
ENSSSCG00000028602	GTPBP4	100	91.798	ENSGGOG00000013372	GTPBP4	100	91.798	Gorilla_gorilla
ENSSSCG00000028602	GTPBP4	100	82.177	ENSHBUG00000000192	gtpbp4	100	82.177	Haplochromis_burtoni
ENSSSCG00000028602	GTPBP4	100	91.009	ENSHGLG00000013071	GTPBP4	100	91.009	Heterocephalus_glaber_female
ENSSSCG00000028602	GTPBP4	100	91.009	ENSHGLG00100017850	GTPBP4	100	91.009	Heterocephalus_glaber_male
ENSSSCG00000028602	GTPBP4	100	83.780	ENSHGLG00100002964	-	100	83.780	Heterocephalus_glaber_male
ENSSSCG00000028602	GTPBP4	100	81.260	ENSHCOG00000011543	gtpbp4	100	81.260	Hippocampus_comes
ENSSSCG00000028602	GTPBP4	100	81.230	ENSIPUG00000014417	GTPBP4	100	81.230	Ictalurus_punctatus
ENSSSCG00000028602	GTPBP4	100	91.798	ENSSTOG00000010042	-	100	91.798	Ictidomys_tridecemlineatus
ENSSSCG00000028602	GTPBP4	100	82.808	ENSSTOG00000023023	-	100	82.808	Ictidomys_tridecemlineatus
ENSSSCG00000028602	GTPBP4	100	89.905	ENSJJAG00000010021	Gtpbp4	100	89.905	Jaculus_jaculus
ENSSSCG00000028602	GTPBP4	100	79.653	ENSKMAG00000021705	gtpbp4	100	79.653	Kryptolebias_marmoratus
ENSSSCG00000028602	GTPBP4	100	77.165	ENSLBEG00000021419	gtpbp4	100	80.612	Labrus_bergylta
ENSSSCG00000028602	GTPBP4	100	81.546	ENSLACG00000001449	GTPBP4	100	81.546	Latimeria_chalumnae
ENSSSCG00000028602	GTPBP4	100	79.385	ENSLOCG00000012279	gtpbp4	100	79.385	Lepisosteus_oculatus
ENSSSCG00000028602	GTPBP4	100	91.325	ENSLAFG00000018578	GTPBP4	100	91.325	Loxodonta_africana
ENSSSCG00000028602	GTPBP4	100	92.271	ENSMFAG00000046251	GTPBP4	100	92.271	Macaca_fascicularis
ENSSSCG00000028602	GTPBP4	100	89.432	ENSMMUG00000010813	GTPBP4	100	89.432	Macaca_mulatta
ENSSSCG00000028602	GTPBP4	100	92.271	ENSMNEG00000044366	GTPBP4	100	92.271	Macaca_nemestrina
ENSSSCG00000028602	GTPBP4	100	91.798	ENSMLEG00000039605	GTPBP4	100	91.798	Mandrillus_leucophaeus
ENSSSCG00000028602	GTPBP4	100	81.703	ENSMAMG00000013763	gtpbp4	92	81.703	Mastacembelus_armatus
ENSSSCG00000028602	GTPBP4	100	82.019	ENSMZEG00005006621	gtpbp4	100	82.019	Maylandia_zebra
ENSSSCG00000028602	GTPBP4	100	91.483	ENSMAUG00000000571	Gtpbp4	100	91.483	Mesocricetus_auratus
ENSSSCG00000028602	GTPBP4	100	91.956	ENSMICG00000013332	GTPBP4	100	91.956	Microcebus_murinus
ENSSSCG00000028602	GTPBP4	100	91.167	ENSMOCG00000002209	Gtpbp4	100	91.167	Microtus_ochrogaster
ENSSSCG00000028602	GTPBP4	100	77.445	ENSMMOG00000011257	gtpbp4	100	77.445	Mola_mola
ENSSSCG00000028602	GTPBP4	100	88.486	ENSMODG00000005978	GTPBP4	100	88.486	Monodelphis_domestica
ENSSSCG00000028602	GTPBP4	100	81.388	ENSMALG00000012488	gtpbp4	100	81.388	Monopterus_albus
ENSSSCG00000028602	GTPBP4	99	90.032	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	90.032	Mus_caroli
ENSSSCG00000028602	GTPBP4	100	91.483	ENSMUSG00000021149	Gtpbp4	100	91.483	Mus_musculus
ENSSSCG00000028602	GTPBP4	100	91.167	MGP_PahariEiJ_G0019265	Gtpbp4	100	91.167	Mus_pahari
ENSSSCG00000028602	GTPBP4	99	91.297	MGP_SPRETEiJ_G0019073	Gtpbp4	100	91.297	Mus_spretus
ENSSSCG00000028602	GTPBP4	93	92.675	ENSMPUG00000016221	GTPBP4	100	92.675	Mustela_putorius_furo
ENSSSCG00000028602	GTPBP4	100	91.483	ENSMLUG00000028192	GTPBP4	100	91.483	Myotis_lucifugus
ENSSSCG00000028602	GTPBP4	100	90.536	ENSNGAG00000015364	Gtpbp4	100	90.536	Nannospalax_galili
ENSSSCG00000028602	GTPBP4	87	82.222	ENSNBRG00000019965	gtpbp4	86	82.222	Neolamprologus_brichardi
ENSSSCG00000028602	GTPBP4	100	91.956	ENSNLEG00000013495	GTPBP4	100	91.956	Nomascus_leucogenys
ENSSSCG00000028602	GTPBP4	64	90.909	ENSMEUG00000016215	-	72	90.909	Notamacropus_eugenii
ENSSSCG00000028602	GTPBP4	89	95.418	ENSOPRG00000008671	GTPBP4	86	95.418	Ochotona_princeps
ENSSSCG00000028602	GTPBP4	100	89.748	ENSODEG00000019152	-	100	89.748	Octodon_degus
ENSSSCG00000028602	GTPBP4	100	92.114	ENSODEG00000000962	-	100	92.114	Octodon_degus
ENSSSCG00000028602	GTPBP4	100	82.019	ENSONIG00000017707	gtpbp4	100	82.019	Oreochromis_niloticus
ENSSSCG00000028602	GTPBP4	99	85.804	ENSOANG00000006095	-	99	85.804	Ornithorhynchus_anatinus
ENSSSCG00000028602	GTPBP4	59	85.488	ENSOCUG00000014716	-	100	85.488	Oryctolagus_cuniculus
ENSSSCG00000028602	GTPBP4	100	89.432	ENSOCUG00000016120	-	100	89.432	Oryctolagus_cuniculus
ENSSSCG00000028602	GTPBP4	100	80.599	ENSORLG00000006151	gtpbp4	100	80.599	Oryzias_latipes
ENSSSCG00000028602	GTPBP4	100	80.599	ENSORLG00020020899	gtpbp4	100	80.599	Oryzias_latipes_hni
ENSSSCG00000028602	GTPBP4	100	80.442	ENSORLG00015020562	gtpbp4	100	80.442	Oryzias_latipes_hsok
ENSSSCG00000028602	GTPBP4	100	80.599	ENSOMEG00000019684	gtpbp4	100	80.599	Oryzias_melastigma
ENSSSCG00000028602	GTPBP4	100	91.798	ENSOGAG00000011941	GTPBP4	100	91.798	Otolemur_garnettii
ENSSSCG00000028602	GTPBP4	100	92.936	ENSOARG00000015047	GTPBP4	100	92.779	Ovis_aries
ENSSSCG00000028602	GTPBP4	100	91.798	ENSPPAG00000042066	GTPBP4	100	91.798	Pan_paniscus
ENSSSCG00000028602	GTPBP4	100	92.902	ENSPPRG00000009895	GTPBP4	100	92.902	Panthera_pardus
ENSSSCG00000028602	GTPBP4	100	92.744	ENSPTIG00000008569	GTPBP4	100	92.744	Panthera_tigris_altaica
ENSSSCG00000028602	GTPBP4	71	93.819	ENSPTRG00000002236	GTPBP4	86	94.420	Pan_troglodytes
ENSSSCG00000028602	GTPBP4	100	91.956	ENSPANG00000023543	GTPBP4	100	91.956	Papio_anubis
ENSSSCG00000028602	GTPBP4	100	81.546	ENSPKIG00000012301	gtpbp4	100	81.546	Paramormyrops_kingsleyae
ENSSSCG00000028602	GTPBP4	56	89.916	ENSPSIG00000005442	GTPBP4	93	89.916	Pelodiscus_sinensis
ENSSSCG00000028602	GTPBP4	100	77.603	ENSPMGG00000001462	gtpbp4	100	77.603	Periophthalmus_magnuspinnatus
ENSSSCG00000028602	GTPBP4	100	67.823	ENSPEMG00000012279	-	100	67.823	Peromyscus_maniculatus_bairdii
ENSSSCG00000028602	GTPBP4	100	91.325	ENSPEMG00000015091	-	100	91.325	Peromyscus_maniculatus_bairdii
ENSSSCG00000028602	GTPBP4	100	75.552	ENSPMAG00000000905	gtpbp4	100	75.552	Petromyzon_marinus
ENSSSCG00000028602	GTPBP4	100	88.328	ENSPCIG00000026082	GTPBP4	100	88.328	Phascolarctos_cinereus
ENSSSCG00000028602	GTPBP4	100	81.230	ENSPFOG00000000026	gtpbp4	100	81.230	Poecilia_formosa
ENSSSCG00000028602	GTPBP4	92	81.709	ENSPLAG00000002898	gtpbp4	97	81.818	Poecilia_latipinna
ENSSSCG00000028602	GTPBP4	100	81.388	ENSPMEG00000016422	gtpbp4	100	81.388	Poecilia_mexicana
ENSSSCG00000028602	GTPBP4	100	78.076	ENSPREG00000019870	gtpbp4	100	78.076	Poecilia_reticulata
ENSSSCG00000028602	GTPBP4	100	92.271	ENSPPYG00000002037	GTPBP4	100	92.271	Pongo_abelii
ENSSSCG00000028602	GTPBP4	51	94.667	ENSPCAG00000006152	-	50	94.667	Procavia_capensis
ENSSSCG00000028602	GTPBP4	100	87.697	ENSPCOG00000014382	-	100	87.697	Propithecus_coquereli
ENSSSCG00000028602	GTPBP4	97	86.829	ENSPCOG00000014602	-	100	86.667	Propithecus_coquereli
ENSSSCG00000028602	GTPBP4	92	94.340	ENSPVAG00000005882	GTPBP4	86	94.340	Pteropus_vampyrus
ENSSSCG00000028602	GTPBP4	100	72.240	ENSPNYG00000024251	gtpbp4	100	72.240	Pundamilia_nyererei
ENSSSCG00000028602	GTPBP4	100	81.073	ENSPNAG00000019977	gtpbp4	100	81.073	Pygocentrus_nattereri
ENSSSCG00000028602	GTPBP4	100	91.038	ENSRNOG00000016217	Gtpbp4	100	91.038	Rattus_norvegicus
ENSSSCG00000028602	GTPBP4	100	92.587	ENSRBIG00000028875	GTPBP4	100	92.587	Rhinopithecus_bieti
ENSSSCG00000028602	GTPBP4	100	92.587	ENSRROG00000030798	GTPBP4	100	92.587	Rhinopithecus_roxellana
ENSSSCG00000028602	GTPBP4	99	46.512	YPL093W	-	99	46.357	Saccharomyces_cerevisiae
ENSSSCG00000028602	GTPBP4	100	91.509	ENSSBOG00000028421	GTPBP4	100	91.509	Saimiri_boliviensis_boliviensis
ENSSSCG00000028602	GTPBP4	99	88.217	ENSSHAG00000014713	GTPBP4	94	88.217	Sarcophilus_harrisii
ENSSSCG00000028602	GTPBP4	100	81.546	ENSSFOG00015003167	gtpbp4	100	81.546	Scleropages_formosus
ENSSSCG00000028602	GTPBP4	100	80.284	ENSSMAG00000005863	gtpbp4	100	80.284	Scophthalmus_maximus
ENSSSCG00000028602	GTPBP4	100	81.388	ENSSDUG00000006534	gtpbp4	100	81.388	Seriola_dumerili
ENSSSCG00000028602	GTPBP4	100	81.073	ENSSLDG00000020688	gtpbp4	100	81.073	Seriola_lalandi_dorsalis
ENSSSCG00000028602	GTPBP4	61	98.020	ENSSARG00000003409	-	79	98.020	Sorex_araneus
ENSSSCG00000028602	GTPBP4	100	83.596	ENSSPUG00000002153	GTPBP4	100	83.596	Sphenodon_punctatus
ENSSSCG00000028602	GTPBP4	63	71.285	ENSSPAG00000014583	gtpbp4	100	71.285	Stegastes_partitus
ENSSSCG00000028602	GTPBP4	99	84.076	ENSTGUG00000000820	GTPBP4	100	85.350	Taeniopygia_guttata
ENSSSCG00000028602	GTPBP4	100	80.442	ENSTRUG00000003900	gtpbp4	100	80.442	Takifugu_rubripes
ENSSSCG00000028602	GTPBP4	100	81.703	ENSTNIG00000007992	gtpbp4	100	81.703	Tetraodon_nigroviridis
ENSSSCG00000028602	GTPBP4	100	75.430	ENSTBEG00000003613	GTPBP4	100	75.430	Tupaia_belangeri
ENSSSCG00000028602	GTPBP4	100	88.125	ENSTTRG00000011163	GTPBP4	100	88.125	Tursiops_truncatus
ENSSSCG00000028602	GTPBP4	100	92.429	ENSUAMG00000013191	GTPBP4	100	92.429	Ursus_americanus
ENSSSCG00000028602	GTPBP4	93	91.823	ENSUMAG00000016138	GTPBP4	100	91.823	Ursus_maritimus
ENSSSCG00000028602	GTPBP4	100	92.271	ENSVVUG00000008608	GTPBP4	98	92.271	Vulpes_vulpes
ENSSSCG00000028602	GTPBP4	100	72.555	ENSXETG00000018097	gtpbp4	100	72.973	Xenopus_tropicalis
ENSSSCG00000028602	GTPBP4	100	75.824	ENSXCOG00000019953	gtpbp4	98	75.824	Xiphophorus_couchianus
ENSSSCG00000028602	GTPBP4	100	81.319	ENSXMAG00000006719	gtpbp4	100	81.319	Xiphophorus_maculatus