EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000029002 (Gene tree)
Gene ID: 102161004
Gene Symbol: PNKD
Alias: BRP17|DKFZp564N1362|DYT8|FKSG19|FPD1|KIAA1184|KIPP1184|MGC31943|MR-1|MR-1S|PDC|PKND1|TAHCCP2
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 66363 bases
Position: chr15:120345279-120411641
Accession: 102161004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000056700	Lactamase_B	PF00753.27	3.8e-11	1	1
ENSSSCP00000020530	Lactamase_B	PF00753.27	6.7e-11	1	1
ENSSSCP00000034064	Lactamase_B	PF00753.27	1.2e-10	1	1
ENSSSCP00000035603	Lactamase_B	PF00753.27	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000058126	PNKD-204	1299	XM_021076196	ENSSSCP00000034064	432 (aa)	XP_020931855	A0A286ZR10
ENSSSCT00000052542	PNKD-201	1827	-	ENSSSCP00000035603	503 (aa)	-	A0A286ZVC1
ENSSSCT00000031141	PNKD-202	2917	XM_021076195	ENSSSCP00000020530	385 (aa)	XP_020931854	I3L919
ENSSSCT00000056507	PNKD-203	1291	XM_021076197	ENSSSCP00000056700	314 (aa)	XP_020931856	A0A287BJJ7

Gene Model

Click here to download ENSSSCG00000029002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000029002	PNKD	76	43.096	ENSSSCG00000008012	HAGH	91	43.277
ENSSSCG00000029002	PNKD	53	31.579	ENSSSCG00000003064	ETHE1	65	31.579
ENSSSCG00000029002	PNKD	72	43.421	ENSSSCG00000008003	HAGHL	80	43.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029002	PNKD	100	95.860	ENSG00000127838	PNKD	100	95.325	Homo_sapiens
ENSSSCG00000029002	PNKD	97	63.072	ENSAPOG00000019072	pnkd	91	64.925	Acanthochromis_polyacanthus
ENSSSCG00000029002	PNKD	100	98.726	ENSAMEG00000003089	PNKD	100	100.000	Ailuropoda_melanoleuca
ENSSSCG00000029002	PNKD	97	62.418	ENSACIG00000015359	pnkd	84	65.863	Amphilophus_citrinellus
ENSSSCG00000029002	PNKD	97	62.745	ENSAOCG00000011458	-	91	64.552	Amphiprion_ocellaris
ENSSSCG00000029002	PNKD	79	66.265	ENSAOCG00000024159	pnkd	81	64.552	Amphiprion_ocellaris
ENSSSCG00000029002	PNKD	97	62.745	ENSAPEG00000011710	pnkd	91	64.552	Amphiprion_percula
ENSSSCG00000029002	PNKD	97	62.418	ENSATEG00000002727	pnkd	92	64.552	Anabas_testudineus
ENSSSCG00000029002	PNKD	97	63.072	ENSACAG00000001617	PNKD	96	61.824	Anolis_carolinensis
ENSSSCG00000029002	PNKD	100	95.860	ENSANAG00000019661	PNKD	100	96.552	Aotus_nancymaae
ENSSSCG00000029002	PNKD	97	63.399	ENSACLG00000021665	pnkd	91	65.299	Astatotilapia_calliptera
ENSSSCG00000029002	PNKD	97	63.518	ENSAMXG00000043305	pnkd	89	65.779	Astyanax_mexicanus
ENSSSCG00000029002	PNKD	97	97.386	ENSBTAG00000003936	PNKD	98	96.610	Bos_taurus
ENSSSCG00000029002	PNKD	100	95.860	ENSCJAG00000010820	PNKD	100	95.065	Callithrix_jacchus
ENSSSCG00000029002	PNKD	100	95.860	ENSCAFG00000014632	PNKD	100	100.000	Canis_familiaris
ENSSSCG00000029002	PNKD	97	98.693	ENSCAFG00020027093	PNKD	98	100.000	Canis_lupus_dingo
ENSSSCG00000029002	PNKD	100	97.134	ENSCHIG00000002862	PNKD	100	96.883	Capra_hircus
ENSSSCG00000029002	PNKD	100	95.541	ENSTSYG00000034863	PNKD	100	95.065	Carlito_syrichta
ENSSSCG00000029002	PNKD	100	95.860	ENSCPOG00000020589	PNKD	100	96.730	Cavia_porcellus
ENSSSCG00000029002	PNKD	100	96.178	ENSCCAG00000036713	PNKD	100	95.325	Cebus_capucinus
ENSSSCG00000029002	PNKD	100	95.541	ENSCATG00000041188	PNKD	100	95.065	Cercocebus_atys
ENSSSCG00000029002	PNKD	100	95.860	ENSCLAG00000012048	PNKD	100	96.730	Chinchilla_lanigera
ENSSSCG00000029002	PNKD	100	95.541	ENSCSAG00000008892	PNKD	100	95.065	Chlorocebus_sabaeus
ENSSSCG00000029002	PNKD	100	95.541	ENSCANG00000032283	PNKD	100	95.065	Colobus_angolensis_palliatus
ENSSSCG00000029002	PNKD	100	95.325	ENSCGRG00001024071	Pnkd	100	95.640	Cricetulus_griseus_chok1gshd
ENSSSCG00000029002	PNKD	100	94.904	ENSCGRG00000005443	Pnkd	100	94.231	Cricetulus_griseus_crigri
ENSSSCG00000029002	PNKD	97	60.458	ENSCSEG00000013958	pnkd	99	55.667	Cynoglossus_semilaevis
ENSSSCG00000029002	PNKD	96	63.787	ENSCVAG00000005723	pnkd	98	58.923	Cyprinodon_variegatus
ENSSSCG00000029002	PNKD	97	61.889	ENSDARG00000071032	pnkd	89	64.259	Danio_rerio
ENSSSCG00000029002	PNKD	97	95.738	ENSDNOG00000046154	PNKD	86	93.197	Dasypus_novemcinctus
ENSSSCG00000029002	PNKD	100	96.519	ENSDORG00000016109	Pnkd	100	97.003	Dipodomys_ordii
ENSSSCG00000029002	PNKD	97	73.871	ENSETEG00000014587	PNKD	100	64.524	Echinops_telfairi
ENSSSCG00000029002	PNKD	96	54.153	ENSEBUG00000013857	pnkd	97	55.118	Eptatretus_burgeri
ENSSSCG00000029002	PNKD	97	97.386	ENSEASG00005012391	PNKD	98	95.918	Equus_asinus_asinus
ENSSSCG00000029002	PNKD	100	97.452	ENSECAG00000013322	PNKD	100	96.623	Equus_caballus
ENSSSCG00000029002	PNKD	97	61.111	ENSELUG00000015007	pnkd	96	57.966	Esox_lucius
ENSSSCG00000029002	PNKD	97	98.039	ENSFCAG00000002373	PNKD	98	96.259	Felis_catus
ENSSSCG00000029002	PNKD	97	62.951	ENSFALG00000004028	PNKD	97	64.207	Ficedula_albicollis
ENSSSCG00000029002	PNKD	100	95.860	ENSFDAG00000012326	PNKD	100	96.935	Fukomys_damarensis
ENSSSCG00000029002	PNKD	97	63.072	ENSFHEG00000010999	pnkd	87	66.038	Fundulus_heteroclitus
ENSSSCG00000029002	PNKD	97	61.438	ENSGMOG00000009565	pnkd	93	62.950	Gadus_morhua
ENSSSCG00000029002	PNKD	98	62.013	ENSGALG00000022166	PNKD	99	63.922	Gallus_gallus
ENSSSCG00000029002	PNKD	97	63.399	ENSGAFG00000013942	pnkd	80	66.795	Gambusia_affinis
ENSSSCG00000029002	PNKD	97	62.418	ENSGACG00000007119	pnkd	89	64.552	Gasterosteus_aculeatus
ENSSSCG00000029002	PNKD	97	62.745	ENSGAGG00000017234	PNKD	100	65.517	Gopherus_agassizii
ENSSSCG00000029002	PNKD	100	95.860	ENSGGOG00000006892	PNKD	100	95.325	Gorilla_gorilla
ENSSSCG00000029002	PNKD	97	63.399	ENSHBUG00000001234	pnkd	91	65.299	Haplochromis_burtoni
ENSSSCG00000029002	PNKD	100	95.541	ENSHGLG00000013971	PNKD	100	96.458	Heterocephalus_glaber_female
ENSSSCG00000029002	PNKD	100	95.541	ENSHGLG00100005225	PNKD	100	96.458	Heterocephalus_glaber_male
ENSSSCG00000029002	PNKD	96	63.123	ENSHCOG00000018894	pnkd	89	63.806	Hippocampus_comes
ENSSSCG00000029002	PNKD	97	63.844	ENSIPUG00000013907	pnkd	99	67.200	Ictalurus_punctatus
ENSSSCG00000029002	PNKD	100	96.623	ENSSTOG00000024593	PNKD	100	98.093	Ictidomys_tridecemlineatus
ENSSSCG00000029002	PNKD	100	94.586	ENSJJAG00000023559	Pnkd	100	95.913	Jaculus_jaculus
ENSSSCG00000029002	PNKD	97	62.418	ENSKMAG00000014879	pnkd	89	65.267	Kryptolebias_marmoratus
ENSSSCG00000029002	PNKD	97	62.092	ENSLBEG00000000985	pnkd	89	65.267	Labrus_bergylta
ENSSSCG00000029002	PNKD	97	62.092	ENSLOCG00000000821	pnkd	89	65.267	Lepisosteus_oculatus
ENSSSCG00000029002	PNKD	100	92.357	ENSLAFG00000007427	PNKD	100	94.550	Loxodonta_africana
ENSSSCG00000029002	PNKD	100	95.541	ENSMFAG00000038281	PNKD	100	95.065	Macaca_fascicularis
ENSSSCG00000029002	PNKD	58	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSSSCG00000029002	PNKD	100	95.541	ENSMNEG00000041541	PNKD	100	95.541	Macaca_nemestrina
ENSSSCG00000029002	PNKD	100	95.541	ENSMLEG00000042812	PNKD	100	95.065	Mandrillus_leucophaeus
ENSSSCG00000029002	PNKD	97	62.745	ENSMAMG00000017212	pnkd	99	58.667	Mastacembelus_armatus
ENSSSCG00000029002	PNKD	94	63.051	ENSMZEG00005012514	pnkd	100	66.387	Maylandia_zebra
ENSSSCG00000029002	PNKD	52	61.310	ENSMGAG00000011524	PNKD	80	62.570	Meleagris_gallopavo
ENSSSCG00000029002	PNKD	97	94.444	ENSMAUG00000013099	Pnkd	98	92.517	Mesocricetus_auratus
ENSSSCG00000029002	PNKD	100	95.541	ENSMICG00000042547	PNKD	100	95.325	Microcebus_murinus
ENSSSCG00000029002	PNKD	100	94.904	ENSMOCG00000007956	Pnkd	100	95.109	Microtus_ochrogaster
ENSSSCG00000029002	PNKD	97	62.866	ENSMMOG00000005679	pnkd	89	66.397	Mola_mola
ENSSSCG00000029002	PNKD	99	79.032	ENSMODG00000015497	PNKD	87	80.315	Monodelphis_domestica
ENSSSCG00000029002	PNKD	96	64.452	ENSMALG00000005967	pnkd	78	67.050	Monopterus_albus
ENSSSCG00000029002	PNKD	100	95.325	MGP_CAROLIEiJ_G0014258	Pnkd	100	95.640	Mus_caroli
ENSSSCG00000029002	PNKD	100	95.584	ENSMUSG00000026179	Pnkd	100	96.185	Mus_musculus
ENSSSCG00000029002	PNKD	100	95.584	MGP_PahariEiJ_G0027496	Pnkd	100	96.185	Mus_pahari
ENSSSCG00000029002	PNKD	100	95.325	MGP_SPRETEiJ_G0015064	Pnkd	100	95.325	Mus_spretus
ENSSSCG00000029002	PNKD	97	99.020	ENSMPUG00000016531	PNKD	98	98.246	Mustela_putorius_furo
ENSSSCG00000029002	PNKD	97	97.386	ENSMLUG00000004125	PNKD	100	99.197	Myotis_lucifugus
ENSSSCG00000029002	PNKD	100	94.904	ENSNGAG00000014980	Pnkd	100	95.640	Nannospalax_galili
ENSSSCG00000029002	PNKD	98	62.783	ENSNBRG00000020031	pnkd	95	66.667	Neolamprologus_brichardi
ENSSSCG00000029002	PNKD	100	78.981	ENSMEUG00000011266	PNKD	100	73.684	Notamacropus_eugenii
ENSSSCG00000029002	PNKD	98	95.793	ENSODEG00000009734	PNKD	100	93.069	Octodon_degus
ENSSSCG00000029002	PNKD	97	62.745	ENSONIG00000004389	pnkd	91	64.925	Oreochromis_niloticus
ENSSSCG00000029002	PNKD	100	94.268	ENSOCUG00000023754	PNKD	100	94.823	Oryctolagus_cuniculus
ENSSSCG00000029002	PNKD	96	62.252	ENSORLG00000026276	pnkd	92	61.871	Oryzias_latipes
ENSSSCG00000029002	PNKD	96	62.252	ENSORLG00020008373	pnkd	97	64.257	Oryzias_latipes_hni
ENSSSCG00000029002	PNKD	97	61.438	ENSORLG00015005276	pnkd	92	62.230	Oryzias_latipes_hsok
ENSSSCG00000029002	PNKD	97	61.765	ENSOMEG00000016106	pnkd	97	57.095	Oryzias_melastigma
ENSSSCG00000029002	PNKD	97	96.078	ENSOGAG00000001792	PNKD	100	97.992	Otolemur_garnettii
ENSSSCG00000029002	PNKD	100	97.452	ENSOARG00000019505	PNKD	100	97.143	Ovis_aries
ENSSSCG00000029002	PNKD	100	95.860	ENSPPAG00000034969	PNKD	100	95.325	Pan_paniscus
ENSSSCG00000029002	PNKD	97	98.039	ENSPPRG00000023720	PNKD	98	96.599	Panthera_pardus
ENSSSCG00000029002	PNKD	100	90.130	ENSPTIG00000021040	PNKD	100	94.737	Panthera_tigris_altaica
ENSSSCG00000029002	PNKD	100	95.541	ENSPTRG00000012914	PNKD	100	95.065	Pan_troglodytes
ENSSSCG00000029002	PNKD	100	95.541	ENSPANG00000005752	PNKD	100	95.065	Papio_anubis
ENSSSCG00000029002	PNKD	97	60.458	ENSPKIG00000011208	pnkd	99	63.602	Paramormyrops_kingsleyae
ENSSSCG00000029002	PNKD	97	60.458	ENSPMGG00000005169	pnkd	100	63.454	Periophthalmus_magnuspinnatus
ENSSSCG00000029002	PNKD	100	95.065	ENSPEMG00000010689	Pnkd	100	95.368	Peromyscus_maniculatus_bairdii
ENSSSCG00000029002	PNKD	97	55.229	ENSPMAG00000006947	pnkd	99	57.028	Petromyzon_marinus
ENSSSCG00000029002	PNKD	97	79.412	ENSPCIG00000021457	PNKD	97	75.439	Phascolarctos_cinereus
ENSSSCG00000029002	PNKD	96	63.907	ENSPFOG00000010628	pnkd	95	61.111	Poecilia_formosa
ENSSSCG00000029002	PNKD	67	68.246	ENSPLAG00000020583	pnkd	95	60.870	Poecilia_latipinna
ENSSSCG00000029002	PNKD	78	67.073	ENSPMEG00000006542	pnkd	73	60.764	Poecilia_mexicana
ENSSSCG00000029002	PNKD	96	63.245	ENSPREG00000014434	pnkd	95	59.930	Poecilia_reticulata
ENSSSCG00000029002	PNKD	100	95.223	ENSPPYG00000013167	PNKD	100	94.805	Pongo_abelii
ENSSSCG00000029002	PNKD	100	76.104	ENSPCAG00000003946	PNKD	100	76.104	Procavia_capensis
ENSSSCG00000029002	PNKD	100	96.497	ENSPCOG00000019839	PNKD	100	96.104	Propithecus_coquereli
ENSSSCG00000029002	PNKD	97	63.399	ENSPNYG00000016327	pnkd	100	66.284	Pundamilia_nyererei
ENSSSCG00000029002	PNKD	97	64.169	ENSPNAG00000008655	pnkd	96	63.014	Pygocentrus_nattereri
ENSSSCG00000029002	PNKD	100	95.065	ENSRNOG00000014806	Pnkd	100	95.065	Rattus_norvegicus
ENSSSCG00000029002	PNKD	100	95.541	ENSRBIG00000031614	PNKD	100	95.065	Rhinopithecus_bieti
ENSSSCG00000029002	PNKD	100	95.541	ENSRROG00000045542	PNKD	100	95.065	Rhinopithecus_roxellana
ENSSSCG00000029002	PNKD	100	95.541	ENSSBOG00000036000	PNKD	100	95.640	Saimiri_boliviensis_boliviensis
ENSSSCG00000029002	PNKD	97	79.612	ENSSHAG00000016339	PNKD	100	81.061	Sarcophilus_harrisii
ENSSSCG00000029002	PNKD	97	63.725	ENSSFOG00015013028	pnkd	87	65.672	Scleropages_formosus
ENSSSCG00000029002	PNKD	97	63.072	ENSSMAG00000006812	pnkd	91	65.672	Scophthalmus_maximus
ENSSSCG00000029002	PNKD	97	62.092	ENSSDUG00000012538	pnkd	98	58.446	Seriola_dumerili
ENSSSCG00000029002	PNKD	97	62.092	ENSSLDG00000021431	pnkd	87	64.179	Seriola_lalandi_dorsalis
ENSSSCG00000029002	PNKD	97	52.614	ENSSPUG00000018454	PNKD	95	67.553	Sphenodon_punctatus
ENSSSCG00000029002	PNKD	97	62.745	ENSSPAG00000007083	pnkd	91	64.552	Stegastes_partitus
ENSSSCG00000029002	PNKD	97	60.131	ENSTRUG00000009399	pnkd	89	63.359	Takifugu_rubripes
ENSSSCG00000029002	PNKD	97	60.784	ENSTNIG00000010992	pnkd	92	63.139	Tetraodon_nigroviridis
ENSSSCG00000029002	PNKD	100	96.364	ENSTTRG00000012895	PNKD	100	96.364	Tursiops_truncatus
ENSSSCG00000029002	PNKD	97	99.020	ENSUAMG00000000289	PNKD	98	100.000	Ursus_americanus
ENSSSCG00000029002	PNKD	84	100.000	ENSUMAG00000019639	PNKD	100	100.000	Ursus_maritimus
ENSSSCG00000029002	PNKD	100	98.726	ENSVVUG00000007348	PNKD	100	100.000	Vulpes_vulpes
ENSSSCG00000029002	PNKD	97	64.706	ENSXETG00000014931	pnkd	99	67.063	Xenopus_tropicalis
ENSSSCG00000029002	PNKD	96	63.907	ENSXCOG00000014370	pnkd	95	66.667	Xiphophorus_couchianus