EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000029425 (Gene tree)
Gene ID: 100144465
Gene Symbol: MRPS18B
Alias: -
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 7053 bases
Position: chr7:23165946-23172998
Accession: 100144465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024944	Ribosomal_S18	PF01084.20	8.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000027559	-	1425	-	ENSSSCP00000024944	258 (aa)	-	Q767K8

Gene Model

Click here to download ENSSSCG00000029425's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029425	MRPS18B	100	84.496	ENSG00000204568	MRPS18B	100	84.496	Homo_sapiens
ENSSSCG00000029425	MRPS18B	75	52.821	ENSAPOG00000003719	mrps18b	79	52.821	Acanthochromis_polyacanthus
ENSSSCG00000029425	MRPS18B	100	87.984	ENSAMEG00000013279	MRPS18B	100	87.984	Ailuropoda_melanoleuca
ENSSSCG00000029425	MRPS18B	75	53.333	ENSACIG00000013156	mrps18b	79	53.333	Amphilophus_citrinellus
ENSSSCG00000029425	MRPS18B	75	53.333	ENSAOCG00000008569	mrps18b	79	53.333	Amphiprion_ocellaris
ENSSSCG00000029425	MRPS18B	84	49.541	ENSAPEG00000008204	mrps18b	86	49.541	Amphiprion_percula
ENSSSCG00000029425	MRPS18B	84	48.416	ENSATEG00000012949	mrps18b	86	48.416	Anabas_testudineus
ENSSSCG00000029425	MRPS18B	80	58.216	ENSACAG00000010755	MRPS18B	100	58.216	Anolis_carolinensis
ENSSSCG00000029425	MRPS18B	93	85.000	ENSANAG00000021210	MRPS18B	100	83.721	Aotus_nancymaae
ENSSSCG00000029425	MRPS18B	58	47.333	ENSACLG00000004576	-	73	47.333	Astatotilapia_calliptera
ENSSSCG00000029425	MRPS18B	76	53.030	ENSACLG00000015409	mrps18b	80	53.030	Astatotilapia_calliptera
ENSSSCG00000029425	MRPS18B	85	46.364	ENSAMXG00000034123	mrps18b	89	46.364	Astyanax_mexicanus
ENSSSCG00000029425	MRPS18B	100	91.860	ENSBTAG00000006936	MRPS18B	100	91.860	Bos_taurus
ENSSSCG00000029425	MRPS18B	100	82.946	ENSCJAG00000019949	MRPS18B	100	82.946	Callithrix_jacchus
ENSSSCG00000029425	MRPS18B	93	90.000	ENSCAFG00000000411	MRPS18B	100	87.984	Canis_familiaris
ENSSSCG00000029425	MRPS18B	93	90.000	ENSCAFG00020017573	MRPS18B	100	87.984	Canis_lupus_dingo
ENSSSCG00000029425	MRPS18B	100	91.473	ENSCHIG00000021770	MRPS18B	100	91.473	Capra_hircus
ENSSSCG00000029425	MRPS18B	98	87.302	ENSTSYG00000003333	MRPS18B	99	87.302	Carlito_syrichta
ENSSSCG00000029425	MRPS18B	97	81.928	ENSCAPG00000000098	MRPS18B	98	81.928	Cavia_aperea
ENSSSCG00000029425	MRPS18B	97	81.928	ENSCPOG00000015405	MRPS18B	96	81.928	Cavia_porcellus
ENSSSCG00000029425	MRPS18B	100	84.496	ENSCCAG00000037423	MRPS18B	100	84.496	Cebus_capucinus
ENSSSCG00000029425	MRPS18B	100	84.884	ENSCATG00000040250	MRPS18B	100	84.884	Cercocebus_atys
ENSSSCG00000029425	MRPS18B	96	85.020	ENSCLAG00000003282	MRPS18B	98	85.020	Chinchilla_lanigera
ENSSSCG00000029425	MRPS18B	100	84.496	ENSCSAG00000018793	-	100	84.496	Chlorocebus_sabaeus
ENSSSCG00000029425	MRPS18B	100	83.333	ENSCHOG00000005581	MRPS18B	100	83.333	Choloepus_hoffmanni
ENSSSCG00000029425	MRPS18B	89	54.150	ENSCPBG00000018833	MRPS18B	99	55.242	Chrysemys_picta_bellii
ENSSSCG00000029425	MRPS18B	100	84.496	ENSCANG00000043568	MRPS18B	100	84.496	Colobus_angolensis_palliatus
ENSSSCG00000029425	MRPS18B	99	78.295	ENSCGRG00001018086	Mrps18b	100	78.295	Cricetulus_griseus_chok1gshd
ENSSSCG00000029425	MRPS18B	99	78.295	ENSCGRG00000013676	Mrps18b	100	78.295	Cricetulus_griseus_crigri
ENSSSCG00000029425	MRPS18B	84	48.869	ENSCSEG00000018717	mrps18b	88	48.869	Cynoglossus_semilaevis
ENSSSCG00000029425	MRPS18B	68	55.429	ENSCVAG00000004836	mrps18b	69	55.429	Cyprinodon_variegatus
ENSSSCG00000029425	MRPS18B	76	51.795	ENSDARG00000007065	mrps18b	81	51.795	Danio_rerio
ENSSSCG00000029425	MRPS18B	92	85.232	ENSDNOG00000032393	MRPS18B	92	83.740	Dasypus_novemcinctus
ENSSSCG00000029425	MRPS18B	56	45.890	FBgn0032849	mRpS18B	68	45.890	Drosophila_melanogaster
ENSSSCG00000029425	MRPS18B	99	73.541	ENSETEG00000003113	MRPS18B	99	73.541	Echinops_telfairi
ENSSSCG00000029425	MRPS18B	76	44.444	ENSEBUG00000003724	mrps18b	73	44.444	Eptatretus_burgeri
ENSSSCG00000029425	MRPS18B	100	89.535	ENSEASG00005018922	MRPS18B	100	89.535	Equus_asinus_asinus
ENSSSCG00000029425	MRPS18B	100	88.372	ENSECAG00000022485	MRPS18B	100	88.372	Equus_caballus
ENSSSCG00000029425	MRPS18B	100	80.620	ENSEEUG00000010352	MRPS18B	100	80.620	Erinaceus_europaeus
ENSSSCG00000029425	MRPS18B	76	53.333	ENSELUG00000023727	mrps18b	78	53.333	Esox_lucius
ENSSSCG00000029425	MRPS18B	100	87.597	ENSFCAG00000007686	MRPS18B	100	87.597	Felis_catus
ENSSSCG00000029425	MRPS18B	93	84.100	ENSFDAG00000012231	MRPS18B	98	84.100	Fukomys_damarensis
ENSSSCG00000029425	MRPS18B	68	55.429	ENSFHEG00000017861	mrps18b	71	55.429	Fundulus_heteroclitus
ENSSSCG00000029425	MRPS18B	75	54.922	ENSGMOG00000013271	mrps18b	100	54.922	Gadus_morhua
ENSSSCG00000029425	MRPS18B	68	54.857	ENSGACG00000001379	mrps18b	89	54.857	Gasterosteus_aculeatus
ENSSSCG00000029425	MRPS18B	100	77.132	ENSGGOG00000011317	MRPS18B	100	77.132	Gorilla_gorilla
ENSSSCG00000029425	MRPS18B	76	53.030	ENSHBUG00000008445	mrps18b	80	53.030	Haplochromis_burtoni
ENSSSCG00000029425	MRPS18B	97	82.000	ENSHGLG00000019371	MRPS18B	99	82.000	Heterocephalus_glaber_female
ENSSSCG00000029425	MRPS18B	97	82.000	ENSHGLG00100010530	MRPS18B	96	82.000	Heterocephalus_glaber_male
ENSSSCG00000029425	MRPS18B	76	56.281	ENSHCOG00000007012	mrps18b	81	56.281	Hippocampus_comes
ENSSSCG00000029425	MRPS18B	68	58.286	ENSIPUG00000013958	mrps18b	72	58.286	Ictalurus_punctatus
ENSSSCG00000029425	MRPS18B	89	86.957	ENSSTOG00000011853	MRPS18B	99	86.957	Ictidomys_tridecemlineatus
ENSSSCG00000029425	MRPS18B	99	81.712	ENSJJAG00000003794	Mrps18b	99	81.712	Jaculus_jaculus
ENSSSCG00000029425	MRPS18B	76	52.525	ENSKMAG00000003449	mrps18b	74	52.525	Kryptolebias_marmoratus
ENSSSCG00000029425	MRPS18B	87	44.898	ENSLBEG00000012943	mrps18b	100	44.898	Labrus_bergylta
ENSSSCG00000029425	MRPS18B	71	64.130	ENSLACG00000004722	MRPS18B	76	64.130	Latimeria_chalumnae
ENSSSCG00000029425	MRPS18B	99	86.047	ENSLAFG00000017285	MRPS18B	100	86.047	Loxodonta_africana
ENSSSCG00000029425	MRPS18B	100	84.884	ENSMFAG00000003966	MRPS18B	100	84.884	Macaca_fascicularis
ENSSSCG00000029425	MRPS18B	100	84.884	ENSMMUG00000006525	MRPS18B	100	84.884	Macaca_mulatta
ENSSSCG00000029425	MRPS18B	100	84.109	ENSMNEG00000045059	MRPS18B	100	84.109	Macaca_nemestrina
ENSSSCG00000029425	MRPS18B	100	79.457	ENSMLEG00000033833	MRPS18B	100	79.457	Mandrillus_leucophaeus
ENSSSCG00000029425	MRPS18B	84	52.074	ENSMAMG00000020243	mrps18b	88	52.074	Mastacembelus_armatus
ENSSSCG00000029425	MRPS18B	57	47.619	ENSMZEG00005019697	-	69	47.619	Maylandia_zebra
ENSSSCG00000029425	MRPS18B	76	53.030	ENSMZEG00005017910	mrps18b	80	53.030	Maylandia_zebra
ENSSSCG00000029425	MRPS18B	87	79.018	ENSMAUG00000019160	Mrps18b	100	75.875	Mesocricetus_auratus
ENSSSCG00000029425	MRPS18B	98	86.111	ENSMICG00000031536	MRPS18B	98	86.111	Microcebus_murinus
ENSSSCG00000029425	MRPS18B	90	81.385	ENSMOCG00000013273	Mrps18b	100	78.261	Microtus_ochrogaster
ENSSSCG00000029425	MRPS18B	83	50.698	ENSMMOG00000012076	mrps18b	86	50.698	Mola_mola
ENSSSCG00000029425	MRPS18B	93	74.895	ENSMODG00000015933	MRPS18B	99	74.895	Monodelphis_domestica
ENSSSCG00000029425	MRPS18B	84	50.909	ENSMALG00000019456	mrps18b	85	50.909	Monopterus_albus
ENSSSCG00000029425	MRPS18B	99	77.821	MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	Mus_caroli
ENSSSCG00000029425	MRPS18B	99	77.432	ENSMUSG00000024436	Mrps18b	100	77.432	Mus_musculus
ENSSSCG00000029425	MRPS18B	99	78.125	MGP_PahariEiJ_G0020535	Mrps18b	100	78.125	Mus_pahari
ENSSSCG00000029425	MRPS18B	99	77.043	MGP_SPRETEiJ_G0022448	Mrps18b	100	77.043	Mus_spretus
ENSSSCG00000029425	MRPS18B	100	86.434	ENSMPUG00000011739	MRPS18B	100	86.434	Mustela_putorius_furo
ENSSSCG00000029425	MRPS18B	98	83.794	ENSMLUG00000008850	MRPS18B	98	83.794	Myotis_lucifugus
ENSSSCG00000029425	MRPS18B	90	84.483	ENSNGAG00000017874	Mrps18b	93	85.333	Nannospalax_galili
ENSSSCG00000029425	MRPS18B	62	45.283	ENSNBRG00000020716	-	87	45.283	Neolamprologus_brichardi
ENSSSCG00000029425	MRPS18B	100	85.659	ENSNLEG00000005224	MRPS18B	100	85.659	Nomascus_leucogenys
ENSSSCG00000029425	MRPS18B	89	76.856	ENSMEUG00000012457	MRPS18B	99	76.987	Notamacropus_eugenii
ENSSSCG00000029425	MRPS18B	53	86.131	ENSODEG00000017923	-	97	83.916	Octodon_degus
ENSSSCG00000029425	MRPS18B	71	56.216	ENSONIG00000015945	mrps18b	80	53.535	Oreochromis_niloticus
ENSSSCG00000029425	MRPS18B	88	89.823	ENSOCUG00000002149	MRPS18B	100	85.271	Oryctolagus_cuniculus
ENSSSCG00000029425	MRPS18B	68	56.571	ENSORLG00000010546	mrps18b	78	56.571	Oryzias_latipes
ENSSSCG00000029425	MRPS18B	68	56.818	ENSORLG00020018506	mrps18b	74	57.143	Oryzias_latipes_hni
ENSSSCG00000029425	MRPS18B	68	56.818	ENSORLG00015010248	mrps18b	73	57.143	Oryzias_latipes_hsok
ENSSSCG00000029425	MRPS18B	68	56.571	ENSOMEG00000008194	mrps18b	74	56.571	Oryzias_melastigma
ENSSSCG00000029425	MRPS18B	99	84.436	ENSOGAG00000004435	MRPS18B	100	84.436	Otolemur_garnettii
ENSSSCG00000029425	MRPS18B	100	92.248	ENSOARG00000012647	MRPS18B	100	92.248	Ovis_aries
ENSSSCG00000029425	MRPS18B	100	85.271	ENSPPAG00000039692	-	100	85.271	Pan_paniscus
ENSSSCG00000029425	MRPS18B	100	83.721	ENSPPAG00000018246	-	100	83.721	Pan_paniscus
ENSSSCG00000029425	MRPS18B	100	87.597	ENSPPRG00000003538	MRPS18B	100	87.597	Panthera_pardus
ENSSSCG00000029425	MRPS18B	100	87.597	ENSPTIG00000016443	MRPS18B	100	87.597	Panthera_tigris_altaica
ENSSSCG00000029425	MRPS18B	100	85.271	ENSPTRG00000017932	MRPS18B	100	85.271	Pan_troglodytes
ENSSSCG00000029425	MRPS18B	100	84.884	ENSPANG00000017647	MRPS18B	100	84.884	Papio_anubis
ENSSSCG00000029425	MRPS18B	77	51.515	ENSPKIG00000011007	mrps18b	79	51.515	Paramormyrops_kingsleyae
ENSSSCG00000029425	MRPS18B	71	64.286	ENSPSIG00000011533	MRPS18B	94	56.000	Pelodiscus_sinensis
ENSSSCG00000029425	MRPS18B	76	51.515	ENSPMGG00000020546	mrps18b	81	51.515	Periophthalmus_magnuspinnatus
ENSSSCG00000029425	MRPS18B	99	78.599	ENSPEMG00000001695	Mrps18b	99	81.545	Peromyscus_maniculatus_bairdii
ENSSSCG00000029425	MRPS18B	86	51.092	ENSPMAG00000001665	mrps18b	97	51.528	Petromyzon_marinus
ENSSSCG00000029425	MRPS18B	86	77.027	ENSPCIG00000014983	MRPS18B	88	75.732	Phascolarctos_cinereus
ENSSSCG00000029425	MRPS18B	84	49.083	ENSPFOG00000016437	mrps18b	77	49.083	Poecilia_formosa
ENSSSCG00000029425	MRPS18B	68	56.000	ENSPLAG00000002566	mrps18b	71	56.000	Poecilia_latipinna
ENSSSCG00000029425	MRPS18B	84	49.083	ENSPMEG00000010978	mrps18b	76	49.083	Poecilia_mexicana
ENSSSCG00000029425	MRPS18B	59	61.184	ENSPREG00000012186	mrps18b	57	61.184	Poecilia_reticulata
ENSSSCG00000029425	MRPS18B	100	77.132	ENSPPYG00000016412	MRPS18B	100	77.132	Pongo_abelii
ENSSSCG00000029425	MRPS18B	99	86.381	ENSPCAG00000017028	MRPS18B	99	86.381	Procavia_capensis
ENSSSCG00000029425	MRPS18B	97	77.200	ENSPCOG00000015431	MRPS18B	99	77.200	Propithecus_coquereli
ENSSSCG00000029425	MRPS18B	100	84.884	ENSPVAG00000003981	MRPS18B	100	84.884	Pteropus_vampyrus
ENSSSCG00000029425	MRPS18B	50	47.328	ENSPNYG00000004553	-	70	47.328	Pundamilia_nyererei
ENSSSCG00000029425	MRPS18B	76	53.030	ENSPNYG00000011383	mrps18b	82	53.030	Pundamilia_nyererei
ENSSSCG00000029425	MRPS18B	83	50.467	ENSPNAG00000029858	mrps18b	87	50.467	Pygocentrus_nattereri
ENSSSCG00000029425	MRPS18B	99	77.821	ENSRNOG00000000804	Mrps18b	98	77.821	Rattus_norvegicus
ENSSSCG00000029425	MRPS18B	100	85.271	ENSRBIG00000037128	MRPS18B	100	85.271	Rhinopithecus_bieti
ENSSSCG00000029425	MRPS18B	100	85.271	ENSRROG00000017497	MRPS18B	100	85.271	Rhinopithecus_roxellana
ENSSSCG00000029425	MRPS18B	97	83.665	ENSSBOG00000023414	MRPS18B	99	82.591	Saimiri_boliviensis_boliviensis
ENSSSCG00000029425	MRPS18B	93	70.293	ENSSHAG00000006769	MRPS18B	95	70.293	Sarcophilus_harrisii
ENSSSCG00000029425	MRPS18B	69	56.593	ENSSFOG00015015664	mrps18b	78	54.545	Scleropages_formosus
ENSSSCG00000029425	MRPS18B	84	52.466	ENSSMAG00000020784	mrps18b	89	52.466	Scophthalmus_maximus
ENSSSCG00000029425	MRPS18B	71	56.831	ENSSDUG00000009519	mrps18b	82	54.082	Seriola_dumerili
ENSSSCG00000029425	MRPS18B	59	61.842	ENSSLDG00000000473	mrps18b	55	61.438	Seriola_lalandi_dorsalis
ENSSSCG00000029425	MRPS18B	89	51.613	ENSSPUG00000015230	MRPS18B	99	51.613	Sphenodon_punctatus
ENSSSCG00000029425	MRPS18B	69	58.757	ENSSPAG00000004508	mrps18b	100	50.000	Stegastes_partitus
ENSSSCG00000029425	MRPS18B	69	54.396	ENSTRUG00000022309	mrps18b	64	54.396	Takifugu_rubripes
ENSSSCG00000029425	MRPS18B	100	89.922	ENSTTRG00000008313	MRPS18B	100	89.922	Tursiops_truncatus
ENSSSCG00000029425	MRPS18B	100	88.372	ENSUAMG00000005833	MRPS18B	100	88.372	Ursus_americanus
ENSSSCG00000029425	MRPS18B	100	88.372	ENSUMAG00000019652	MRPS18B	77	88.372	Ursus_maritimus
ENSSSCG00000029425	MRPS18B	75	92.228	ENSVPAG00000001181	MRPS18B	100	92.228	Vicugna_pacos
ENSSSCG00000029425	MRPS18B	93	89.167	ENSVVUG00000009631	MRPS18B	100	87.209	Vulpes_vulpes
ENSSSCG00000029425	MRPS18B	82	47.788	ENSXETG00000032503	MRPS18B	98	47.788	Xenopus_tropicalis
ENSSSCG00000029425	MRPS18B	68	56.000	ENSXCOG00000003011	mrps18b	87	56.000	Xiphophorus_couchianus
ENSSSCG00000029425	MRPS18B	84	48.624	ENSXMAG00000016698	mrps18b	88	48.624	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005763	mitochondrial small ribosomal subunit	25837512.	IDA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISS	Component
GO:0030054	cell junction	-	IEA	Component
GO:0032543	mitochondrial translation	-	IEA	Process