EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000029518 (Gene tree)
Gene ID: 100621912
Gene Symbol: RIOK3
Alias: SUDD
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 25087 bases
Position: chr6:108339007-108364093
Accession: 100621912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000050554	RIO1	PF01163.22	3e-74	1	1
ENSSSCP00000039492	RIO1	PF01163.22	3.7e-74	1	1
ENSSSCP00000054062	RIO1	PF01163.22	4.5e-74	1	1
ENSSSCP00000026298	RIO1	PF01163.22	1.5e-48	1	1
ENSSSCP00000059017	RIO1	PF01163.22	2.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051526	RIOK3-203	3085	XM_021096178	ENSSSCP00000059017	462 (aa)	XP_020951837	A0A287BRE6
ENSSSCT00000028729	RIOK3-204	3057	-	ENSSSCP00000026298	453 (aa)	-	I3LQC0
ENSSSCT00000064771	RIOK3-201	3262	XM_021096177	ENSSSCP00000054062	519 (aa)	XP_020951836	A0A287BD97
ENSSSCT00000042310	RIOK3-202	3144	-	ENSSSCP00000050554	441 (aa)	-	A0A287B383
ENSSSCT00000065029	RIOK3-205	3835	-	ENSSSCP00000039492	481 (aa)	-	A0A287A6U7

Gene Model

Click here to download ENSSSCG00000029518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000029518	RIOK3	73	42.169	ENSSSCG00000001024	RIOK1	61	42.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029518	RIOK3	100	96.881	ENSG00000101782	RIOK3	100	96.339	Homo_sapiens
ENSSSCG00000029518	RIOK3	99	76.591	ENSAPOG00000020861	riok3	99	70.577	Acanthochromis_polyacanthus
ENSSSCG00000029518	RIOK3	100	98.901	ENSAMEG00000013754	RIOK3	85	97.495	Ailuropoda_melanoleuca
ENSSSCG00000029518	RIOK3	99	78.360	ENSACIG00000019894	riok3	98	74.651	Amphilophus_citrinellus
ENSSSCG00000029518	RIOK3	99	78.636	ENSAOCG00000007172	riok3	99	74.949	Amphiprion_ocellaris
ENSSSCG00000029518	RIOK3	99	78.409	ENSAPEG00000002536	riok3	99	74.127	Amphiprion_percula
ENSSSCG00000029518	RIOK3	99	77.149	ENSATEG00000018303	riok3	99	73.214	Anabas_testudineus
ENSSSCG00000029518	RIOK3	100	89.212	ENSAPLG00000006497	RIOK3	100	86.320	Anas_platyrhynchos
ENSSSCG00000029518	RIOK3	99	86.041	ENSACAG00000000159	RIOK3	99	83.205	Anolis_carolinensis
ENSSSCG00000029518	RIOK3	100	97.253	ENSANAG00000030146	RIOK3	86	97.253	Aotus_nancymaae
ENSSSCG00000029518	RIOK3	99	77.904	ENSACLG00000018966	riok3	98	75.309	Astatotilapia_calliptera
ENSSSCG00000029518	RIOK3	96	80.000	ENSAMXG00000015617	riok3	99	72.605	Astyanax_mexicanus
ENSSSCG00000029518	RIOK3	100	97.810	ENSBTAG00000010042	RIOK3	100	97.688	Bos_taurus
ENSSSCG00000029518	RIOK3	94	37.709	WBGene00014012	riok-3	91	35.743	Caenorhabditis_elegans
ENSSSCG00000029518	RIOK3	100	97.732	ENSCJAG00000020556	RIOK3	100	97.303	Callithrix_jacchus
ENSSSCG00000029518	RIOK3	100	99.451	ENSCAFG00000018201	RIOK3	100	97.688	Canis_familiaris
ENSSSCG00000029518	RIOK3	100	98.866	ENSCAFG00020014801	RIOK3	99	97.810	Canis_lupus_dingo
ENSSSCG00000029518	RIOK3	100	98.611	ENSCHIG00000009312	RIOK3	100	98.073	Capra_hircus
ENSSSCG00000029518	RIOK3	100	97.297	ENSTSYG00000000142	RIOK3	100	96.532	Carlito_syrichta
ENSSSCG00000029518	RIOK3	100	96.825	ENSCAPG00000005756	RIOK3	95	96.087	Cavia_aperea
ENSSSCG00000029518	RIOK3	100	96.825	ENSCPOG00000007991	RIOK3	100	95.376	Cavia_porcellus
ENSSSCG00000029518	RIOK3	100	97.732	ENSCCAG00000028338	RIOK3	99	95.340	Cebus_capucinus
ENSSSCG00000029518	RIOK3	100	97.080	ENSCATG00000040824	RIOK3	100	96.339	Cercocebus_atys
ENSSSCG00000029518	RIOK3	99	97.248	ENSCLAG00000006767	RIOK3	99	95.914	Chinchilla_lanigera
ENSSSCG00000029518	RIOK3	100	97.089	ENSCSAG00000017680	RIOK3	100	96.724	Chlorocebus_sabaeus
ENSSSCG00000029518	RIOK3	100	97.417	ENSCHOG00000008343	RIOK3	87	97.417	Choloepus_hoffmanni
ENSSSCG00000029518	RIOK3	100	88.435	ENSCPBG00000027226	RIOK3	100	86.590	Chrysemys_picta_bellii
ENSSSCG00000029518	RIOK3	96	56.725	ENSCSAVG00000003068	-	100	51.844	Ciona_savignyi
ENSSSCG00000029518	RIOK3	95	97.080	ENSCANG00000035939	RIOK3	97	94.595	Colobus_angolensis_palliatus
ENSSSCG00000029518	RIOK3	100	96.145	ENSCGRG00001013249	Riok3	100	94.605	Cricetulus_griseus_chok1gshd
ENSSSCG00000029518	RIOK3	100	95.692	ENSCGRG00000017636	Riok3	100	94.220	Cricetulus_griseus_crigri
ENSSSCG00000029518	RIOK3	99	75.792	ENSCSEG00000018289	riok3	99	73.029	Cynoglossus_semilaevis
ENSSSCG00000029518	RIOK3	99	76.765	ENSCVAG00000011848	riok3	99	71.484	Cyprinodon_variegatus
ENSSSCG00000029518	RIOK3	99	77.854	ENSDARG00000042751	riok3	97	73.810	Danio_rerio
ENSSSCG00000029518	RIOK3	100	97.297	ENSDNOG00000039433	RIOK3	100	96.724	Dasypus_novemcinctus
ENSSSCG00000029518	RIOK3	100	97.506	ENSDORG00000011663	Riok3	100	96.532	Dipodomys_ordii
ENSSSCG00000029518	RIOK3	85	53.333	FBgn0031643	CG3008	75	53.333	Drosophila_melanogaster
ENSSSCG00000029518	RIOK3	93	94.843	ENSETEG00000003689	RIOK3	100	94.008	Echinops_telfairi
ENSSSCG00000029518	RIOK3	93	60.000	ENSEBUG00000000555	riok3	96	53.414	Eptatretus_burgeri
ENSSSCG00000029518	RIOK3	100	97.052	ENSEASG00005002317	RIOK3	100	95.376	Equus_asinus_asinus
ENSSSCG00000029518	RIOK3	100	96.825	ENSECAG00000009028	RIOK3	100	94.990	Equus_caballus
ENSSSCG00000029518	RIOK3	86	96.154	ENSEEUG00000007005	RIOK3	100	77.510	Erinaceus_europaeus
ENSSSCG00000029518	RIOK3	100	77.551	ENSELUG00000017655	riok3	99	72.937	Esox_lucius
ENSSSCG00000029518	RIOK3	100	99.451	ENSFCAG00000000517	RIOK3	100	98.266	Felis_catus
ENSSSCG00000029518	RIOK3	100	88.382	ENSFALG00000006145	RIOK3	100	86.042	Ficedula_albicollis
ENSSSCG00000029518	RIOK3	100	95.238	ENSFDAG00000001548	RIOK3	100	93.642	Fukomys_damarensis
ENSSSCG00000029518	RIOK3	99	77.449	ENSFHEG00000011350	riok3	99	72.201	Fundulus_heteroclitus
ENSSSCG00000029518	RIOK3	99	73.576	ENSGMOG00000005157	riok3	98	72.234	Gadus_morhua
ENSSSCG00000029518	RIOK3	100	87.967	ENSGALG00000015004	RIOK3	100	86.042	Gallus_gallus
ENSSSCG00000029518	RIOK3	92	67.237	ENSGAFG00000002403	riok3	88	64.592	Gambusia_affinis
ENSSSCG00000029518	RIOK3	99	76.644	ENSGACG00000000880	riok3	97	72.277	Gasterosteus_aculeatus
ENSSSCG00000029518	RIOK3	100	87.344	ENSGAGG00000024785	RIOK3	100	85.249	Gopherus_agassizii
ENSSSCG00000029518	RIOK3	66	95.205	ENSGGOG00000036734	-	94	95.205	Gorilla_gorilla
ENSSSCG00000029518	RIOK3	99	77.677	ENSHBUG00000003233	riok3	99	72.008	Haplochromis_burtoni
ENSSSCG00000029518	RIOK3	100	95.465	ENSHGLG00000003885	RIOK3	100	94.412	Heterocephalus_glaber_female
ENSSSCG00000029518	RIOK3	100	95.465	ENSHGLG00100002077	RIOK3	100	94.412	Heterocephalus_glaber_male
ENSSSCG00000029518	RIOK3	99	76.562	ENSHCOG00000006794	riok3	97	71.869	Hippocampus_comes
ENSSSCG00000029518	RIOK3	99	77.169	ENSIPUG00000001406	Riok3	97	73.441	Ictalurus_punctatus
ENSSSCG00000029518	RIOK3	100	97.279	ENSSTOG00000006517	RIOK3	100	96.339	Ictidomys_tridecemlineatus
ENSSSCG00000029518	RIOK3	100	97.052	ENSJJAG00000023689	Riok3	100	94.847	Jaculus_jaculus
ENSSSCG00000029518	RIOK3	99	77.273	ENSKMAG00000007259	riok3	99	71.705	Kryptolebias_marmoratus
ENSSSCG00000029518	RIOK3	99	76.310	ENSLBEG00000013689	riok3	98	72.134	Labrus_bergylta
ENSSSCG00000029518	RIOK3	99	78.719	ENSLACG00000017326	RIOK3	99	74.419	Latimeria_chalumnae
ENSSSCG00000029518	RIOK3	100	82.313	ENSLOCG00000001652	riok3	100	77.115	Lepisosteus_oculatus
ENSSSCG00000029518	RIOK3	100	95.918	ENSLAFG00000001380	RIOK3	100	94.231	Loxodonta_africana
ENSSSCG00000029518	RIOK3	100	97.080	ENSMMUG00000021478	RIOK3	100	96.532	Macaca_mulatta
ENSSSCG00000029518	RIOK3	100	96.753	ENSMNEG00000041106	RIOK3	100	96.753	Macaca_nemestrina
ENSSSCG00000029518	RIOK3	100	97.089	ENSMLEG00000028187	RIOK3	100	96.724	Mandrillus_leucophaeus
ENSSSCG00000029518	RIOK3	99	76.993	ENSMAMG00000008502	riok3	97	73.146	Mastacembelus_armatus
ENSSSCG00000029518	RIOK3	99	77.904	ENSMZEG00005020212	riok3	99	72.008	Maylandia_zebra
ENSSSCG00000029518	RIOK3	100	87.967	ENSMGAG00000010079	RIOK3	100	84.866	Meleagris_gallopavo
ENSSSCG00000029518	RIOK3	99	96.355	ENSMAUG00000020527	Riok3	99	94.971	Mesocricetus_auratus
ENSSSCG00000029518	RIOK3	100	97.732	ENSMICG00000009293	RIOK3	99	96.893	Microcebus_murinus
ENSSSCG00000029518	RIOK3	99	94.737	ENSMOCG00000012114	Riok3	96	93.592	Microtus_ochrogaster
ENSSSCG00000029518	RIOK3	99	74.032	ENSMMOG00000019204	riok3	98	71.663	Mola_mola
ENSSSCG00000029518	RIOK3	100	93.568	ENSMODG00000021496	RIOK3	100	92.500	Monodelphis_domestica
ENSSSCG00000029518	RIOK3	99	76.697	ENSMALG00000020848	riok3	99	71.264	Monopterus_albus
ENSSSCG00000029518	RIOK3	99	96.347	MGP_CAROLIEiJ_G0022001	Riok3	99	95.349	Mus_caroli
ENSSSCG00000029518	RIOK3	99	96.804	ENSMUSG00000024404	Riok3	98	100.000	Mus_musculus
ENSSSCG00000029518	RIOK3	99	97.032	MGP_PahariEiJ_G0018739	Riok3	99	95.930	Mus_pahari
ENSSSCG00000029518	RIOK3	100	99.451	ENSMPUG00000005772	RIOK3	100	97.881	Mustela_putorius_furo
ENSSSCG00000029518	RIOK3	99	96.350	ENSMLUG00000007081	RIOK3	99	94.981	Myotis_lucifugus
ENSSSCG00000029518	RIOK3	99	97.753	ENSNGAG00000011446	Riok3	99	96.117	Nannospalax_galili
ENSSSCG00000029518	RIOK3	76	84.106	ENSNBRG00000016677	riok3	83	73.558	Neolamprologus_brichardi
ENSSSCG00000029518	RIOK3	100	97.089	ENSNLEG00000006758	RIOK3	100	96.724	Nomascus_leucogenys
ENSSSCG00000029518	RIOK3	100	92.744	ENSMEUG00000006292	RIOK3	100	91.538	Notamacropus_eugenii
ENSSSCG00000029518	RIOK3	100	96.825	ENSOPRG00000004803	RIOK3	100	95.376	Ochotona_princeps
ENSSSCG00000029518	RIOK3	100	95.238	ENSODEG00000006444	RIOK3	100	94.220	Octodon_degus
ENSSSCG00000029518	RIOK3	99	76.749	ENSONIG00000013422	riok3	99	73.453	Oreochromis_niloticus
ENSSSCG00000029518	RIOK3	100	91.156	ENSOANG00000012074	RIOK3	100	90.204	Ornithorhynchus_anatinus
ENSSSCG00000029518	RIOK3	100	97.802	ENSOCUG00000016820	RIOK3	100	96.339	Oryctolagus_cuniculus
ENSSSCG00000029518	RIOK3	99	77.955	ENSORLG00000003395	riok3	99	72.727	Oryzias_latipes
ENSSSCG00000029518	RIOK3	99	77.955	ENSORLG00020000672	riok3	99	72.727	Oryzias_latipes_hni
ENSSSCG00000029518	RIOK3	99	77.955	ENSORLG00015007372	riok3	99	72.727	Oryzias_latipes_hsok
ENSSSCG00000029518	RIOK3	99	77.500	ENSOMEG00000001380	riok3	98	72.962	Oryzias_melastigma
ENSSSCG00000029518	RIOK3	100	97.810	ENSOGAG00000014502	RIOK3	90	97.303	Otolemur_garnettii
ENSSSCG00000029518	RIOK3	100	98.611	ENSOARG00000008042	RIOK3	100	98.266	Ovis_aries
ENSSSCG00000029518	RIOK3	100	97.089	ENSPPAG00000030258	RIOK3	100	96.532	Pan_paniscus
ENSSSCG00000029518	RIOK3	100	99.451	ENSPPRG00000023302	RIOK3	100	98.459	Panthera_pardus
ENSSSCG00000029518	RIOK3	100	99.451	ENSPTIG00000000960	RIOK3	100	98.459	Panthera_tigris_altaica
ENSSSCG00000029518	RIOK3	100	96.881	ENSPTRG00000009918	RIOK3	100	96.339	Pan_troglodytes
ENSSSCG00000029518	RIOK3	100	97.089	ENSPANG00000011485	RIOK3	100	96.724	Papio_anubis
ENSSSCG00000029518	RIOK3	99	81.735	ENSPKIG00000018297	riok3	97	78.068	Paramormyrops_kingsleyae
ENSSSCG00000029518	RIOK3	100	87.075	ENSPSIG00000006250	RIOK3	100	84.645	Pelodiscus_sinensis
ENSSSCG00000029518	RIOK3	99	74.828	ENSPMGG00000009414	riok3	99	72.917	Periophthalmus_magnuspinnatus
ENSSSCG00000029518	RIOK3	100	96.145	ENSPEMG00000023794	Riok3	100	94.605	Peromyscus_maniculatus_bairdii
ENSSSCG00000029518	RIOK3	97	72.131	ENSPMAG00000003258	riok3	97	72.055	Petromyzon_marinus
ENSSSCG00000029518	RIOK3	100	92.517	ENSPCIG00000013991	RIOK3	100	92.324	Phascolarctos_cinereus
ENSSSCG00000029518	RIOK3	96	78.689	ENSPFOG00000024127	riok3	99	71.236	Poecilia_formosa
ENSSSCG00000029518	RIOK3	96	78.689	ENSPLAG00000004956	riok3	99	71.429	Poecilia_latipinna
ENSSSCG00000029518	RIOK3	96	78.689	ENSPMEG00000020108	riok3	99	71.676	Poecilia_mexicana
ENSSSCG00000029518	RIOK3	100	76.749	ENSPREG00000010010	riok3	100	71.048	Poecilia_reticulata
ENSSSCG00000029518	RIOK3	100	96.715	ENSPPYG00000009062	RIOK3	100	90.798	Pongo_abelii
ENSSSCG00000029518	RIOK3	88	92.989	ENSPCAG00000001021	RIOK3	76	92.989	Procavia_capensis
ENSSSCG00000029518	RIOK3	100	98.413	ENSPCOG00000022631	RIOK3	100	97.688	Propithecus_coquereli
ENSSSCG00000029518	RIOK3	91	98.895	ENSPVAG00000015817	RIOK3	100	82.659	Pteropus_vampyrus
ENSSSCG00000029518	RIOK3	99	77.904	ENSPNYG00000003271	riok3	99	72.008	Pundamilia_nyererei
ENSSSCG00000029518	RIOK3	100	78.912	ENSPNAG00000006213	riok3	97	74.901	Pygocentrus_nattereri
ENSSSCG00000029518	RIOK3	100	96.372	ENSRNOG00000023376	Riok3	100	94.990	Rattus_norvegicus
ENSSSCG00000029518	RIOK3	100	97.080	ENSRBIG00000035071	RIOK3	100	96.339	Rhinopithecus_bieti
ENSSSCG00000029518	RIOK3	100	96.715	ENSRROG00000045710	RIOK3	100	96.146	Rhinopithecus_roxellana
ENSSSCG00000029518	RIOK3	100	97.732	ENSSBOG00000034387	RIOK3	100	97.303	Saimiri_boliviensis_boliviensis
ENSSSCG00000029518	RIOK3	100	93.455	ENSSHAG00000011854	RIOK3	100	92.500	Sarcophilus_harrisii
ENSSSCG00000029518	RIOK3	100	79.138	ENSSFOG00015012912	riok3	98	76.305	Scleropages_formosus
ENSSSCG00000029518	RIOK3	99	77.376	ENSSMAG00000011527	riok3	99	71.893	Scophthalmus_maximus
ENSSSCG00000029518	RIOK3	99	78.054	ENSSDUG00000016018	riok3	99	72.885	Seriola_dumerili
ENSSSCG00000029518	RIOK3	66	84.768	ENSSLDG00000022246	riok3	93	77.222	Seriola_lalandi_dorsalis
ENSSSCG00000029518	RIOK3	99	98.155	ENSSARG00000010154	RIOK3	87	98.155	Sorex_araneus
ENSSSCG00000029518	RIOK3	99	88.991	ENSSPUG00000015246	RIOK3	99	86.486	Sphenodon_punctatus
ENSSSCG00000029518	RIOK3	99	77.273	ENSSPAG00000000601	riok3	99	72.115	Stegastes_partitus
ENSSSCG00000029518	RIOK3	100	87.967	ENSTGUG00000010392	RIOK3	100	85.660	Taeniopygia_guttata
ENSSSCG00000029518	RIOK3	99	76.082	ENSTRUG00000007055	riok3	99	70.962	Takifugu_rubripes
ENSSSCG00000029518	RIOK3	99	69.932	ENSTNIG00000001855	riok3	99	68.107	Tetraodon_nigroviridis
ENSSSCG00000029518	RIOK3	64	100.000	ENSTBEG00000015851	RIOK3	55	100.000	Tupaia_belangeri
ENSSSCG00000029518	RIOK3	100	97.802	ENSTTRG00000008839	RIOK3	100	96.917	Tursiops_truncatus
ENSSSCG00000029518	RIOK3	100	98.901	ENSUAMG00000018410	RIOK3	100	97.303	Ursus_americanus
ENSSSCG00000029518	RIOK3	98	99.425	ENSUMAG00000020218	RIOK3	97	97.456	Ursus_maritimus
ENSSSCG00000029518	RIOK3	100	98.901	ENSVPAG00000009034	RIOK3	100	98.073	Vicugna_pacos
ENSSSCG00000029518	RIOK3	100	99.451	ENSVVUG00000003651	RIOK3	76	97.688	Vulpes_vulpes
ENSSSCG00000029518	RIOK3	99	80.227	ENSXETG00000027370	riok3	100	75.385	Xenopus_tropicalis
ENSSSCG00000029518	RIOK3	99	76.538	ENSXCOG00000001032	riok3	99	72.112	Xiphophorus_couchianus
ENSSSCG00000029518	RIOK3	99	76.993	ENSXMAG00000012902	riok3	99	71.622	Xiphophorus_maculatus