EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000029539 (Gene tree)
Gene ID: 100155623
Gene Symbol: RAB23
Alias: -
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 26894 bases
Position: chr7:28632060-28658953
Accession: 100155623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035074	MMR_HSR1	PF01926.23	9.2e-06	1	1
ENSSSCP00000023785	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000026804	RAB23-201	4376	XM_001929636	ENSSSCP00000023785	237 (aa)	XP_001929671	F1RZV2
ENSSSCT00000055828	RAB23-202	4260	-	ENSSSCP00000035074	206 (aa)	-	A0A286ZTT8

Gene Model

Click here to download ENSSSCG00000029539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000029539	RAB23	73	37.500	ENSSSCG00000037653	RAB5A	74	37.500
ENSSSCG00000029539	RAB23	80	31.980	ENSSSCG00000012658	RAB33A	71	31.980
ENSSSCG00000029539	RAB23	76	38.509	ENSSSCG00000017769	RAB34	62	38.509
ENSSSCG00000029539	RAB23	68	32.867	ENSSSCG00000027443	MRAS	80	35.465
ENSSSCG00000029539	RAB23	79	35.976	ENSSSCG00000032312	RAB11A	88	34.031
ENSSSCG00000029539	RAB23	85	31.188	ENSSSCG00000039186	RAB25	92	31.188
ENSSSCG00000029539	RAB23	86	34.762	ENSSSCG00000029544	RAB2B	95	34.973
ENSSSCG00000029539	RAB23	81	39.286	ENSSSCG00000014828	RAB6A	80	39.286
ENSSSCG00000029539	RAB23	94	32.308	ENSSSCG00000012954	RAB1B	100	32.609
ENSSSCG00000029539	RAB23	83	35.088	ENSSSCG00000006232	RAB2A	96	31.905
ENSSSCG00000029539	RAB23	77	39.623	ENSSSCG00000014900	RAB30	87	38.068
ENSSSCG00000029539	RAB23	73	42.105	ENSSSCG00000036503	RAB6B	76	41.772
ENSSSCG00000029539	RAB23	70	36.054	ENSSSCG00000016434	RHEB	84	35.484
ENSSSCG00000029539	RAB23	81	34.524	ENSSSCG00000008359	RAB1A	81	35.849
ENSSSCG00000029539	RAB23	69	32.414	ENSSSCG00000032477	NRAS	85	35.583
ENSSSCG00000029539	RAB23	74	35.714	ENSSSCG00000028655	RAB18	83	35.465
ENSSSCG00000029539	RAB23	80	35.079	ENSSSCG00000013600	RAB11B	88	35.079
ENSSSCG00000029539	RAB23	73	35.484	ENSSSCG00000038026	RAB12	68	35.119
ENSSSCG00000029539	RAB23	93	37.255	ENSSSCG00000010048	RAB36	77	37.255
ENSSSCG00000029539	RAB23	73	39.490	ENSSSCG00000032672	RAB9B	79	39.375
ENSSSCG00000029539	RAB23	77	34.161	ENSSSCG00000002280	RAB15	81	34.682
ENSSSCG00000029539	RAB23	69	32.414	ENSSSCG00000026969	KRAS	92	33.714
ENSSSCG00000029539	RAB23	74	36.129	ENSSSCG00000024233	RAB39B	79	34.911
ENSSSCG00000029539	RAB23	94	33.953	ENSSSCG00000030432	-	96	33.953
ENSSSCG00000029539	RAB23	73	36.842	ENSSSCG00000032467	RAB5C	80	35.838
ENSSSCG00000029539	RAB23	79	37.209	ENSSSCG00000006564	-	88	37.222
ENSSSCG00000029539	RAB23	77	35.583	ENSSSCG00000020711	RAB33B	78	32.961
ENSSSCG00000029539	RAB23	75	31.551	ENSSSCG00000008835	RASL11B	74	31.551
ENSSSCG00000029539	RAB23	72	36.129	ENSSSCG00000012123	RAB9A	92	33.514
ENSSSCG00000029539	RAB23	92	30.000	ENSSSCG00000007513	RAB22A	96	30.000
ENSSSCG00000029539	RAB23	96	34.300	ENSSSCG00000011615	RAB7A	97	34.300
ENSSSCG00000029539	RAB23	76	33.544	ENSSSCG00000005514	RAB14	77	34.337
ENSSSCG00000029539	RAB23	69	31.724	ENSSSCG00000031513	HRAS	85	34.969
ENSSSCG00000029539	RAB23	77	36.478	ENSSSCG00000033876	RAB35	95	33.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029539	RAB23	100	94.515	ENSG00000112210	RAB23	100	94.515	Homo_sapiens
ENSSSCG00000029539	RAB23	99	83.404	ENSAPOG00000008892	rab23	99	83.404	Acanthochromis_polyacanthus
ENSSSCG00000029539	RAB23	100	95.359	ENSAMEG00000006825	RAB23	100	95.359	Ailuropoda_melanoleuca
ENSSSCG00000029539	RAB23	99	82.439	ENSACIG00000020496	rab23	99	82.439	Amphilophus_citrinellus
ENSSSCG00000029539	RAB23	99	84.466	ENSAOCG00000004234	rab23	99	84.466	Amphiprion_ocellaris
ENSSSCG00000029539	RAB23	99	84.466	ENSAPEG00000019758	rab23	99	84.466	Amphiprion_percula
ENSSSCG00000029539	RAB23	99	82.439	ENSATEG00000020913	rab23	99	82.439	Anabas_testudineus
ENSSSCG00000029539	RAB23	84	89.595	ENSAPLG00000003715	RAB23	99	93.182	Anas_platyrhynchos
ENSSSCG00000029539	RAB23	100	88.235	ENSACAG00000006656	RAB23	100	88.235	Anolis_carolinensis
ENSSSCG00000029539	RAB23	100	94.515	ENSANAG00000027052	-	100	94.515	Aotus_nancymaae
ENSSSCG00000029539	RAB23	99	81.780	ENSACLG00000002819	rab23	99	81.780	Astatotilapia_calliptera
ENSSSCG00000029539	RAB23	99	86.829	ENSAMXG00000014960	rab23	99	86.829	Astyanax_mexicanus
ENSSSCG00000029539	RAB23	100	97.046	ENSBTAG00000005362	RAB23	100	97.046	Bos_taurus
ENSSSCG00000029539	RAB23	100	94.515	ENSCJAG00000010247	RAB23	100	94.515	Callithrix_jacchus
ENSSSCG00000029539	RAB23	100	96.203	ENSCAFG00000002459	RAB23	100	96.203	Canis_familiaris
ENSSSCG00000029539	RAB23	100	96.203	ENSCAFG00020015900	RAB23	100	96.203	Canis_lupus_dingo
ENSSSCG00000029539	RAB23	100	97.046	ENSCHIG00000009815	RAB23	100	97.046	Capra_hircus
ENSSSCG00000029539	RAB23	99	94.492	ENSTSYG00000029126	RAB23	99	94.492	Carlito_syrichta
ENSSSCG00000029539	RAB23	100	89.873	ENSCPOG00000030218	RAB23	100	89.873	Cavia_porcellus
ENSSSCG00000029539	RAB23	100	94.093	ENSCCAG00000020364	RAB23	100	94.093	Cebus_capucinus
ENSSSCG00000029539	RAB23	100	95.359	ENSCATG00000027876	RAB23	100	95.359	Cercocebus_atys
ENSSSCG00000029539	RAB23	100	93.249	ENSCLAG00000000797	RAB23	100	93.249	Chinchilla_lanigera
ENSSSCG00000029539	RAB23	100	94.515	ENSCSAG00000013438	RAB23	100	94.515	Chlorocebus_sabaeus
ENSSSCG00000029539	RAB23	100	89.030	ENSCPBG00000022640	RAB23	100	89.030	Chrysemys_picta_bellii
ENSSSCG00000029539	RAB23	99	64.609	ENSCING00000001155	-	99	63.223	Ciona_intestinalis
ENSSSCG00000029539	RAB23	99	62.185	ENSCSAVG00000001356	-	99	61.765	Ciona_savignyi
ENSSSCG00000029539	RAB23	100	95.359	ENSCANG00000031065	RAB23	100	95.359	Colobus_angolensis_palliatus
ENSSSCG00000029539	RAB23	100	92.405	ENSCGRG00001008994	Rab23	100	92.405	Cricetulus_griseus_chok1gshd
ENSSSCG00000029539	RAB23	99	91.525	ENSCGRG00000013630	Rab23	100	91.525	Cricetulus_griseus_crigri
ENSSSCG00000029539	RAB23	99	82.439	ENSCSEG00000010565	rab23	99	82.439	Cynoglossus_semilaevis
ENSSSCG00000029539	RAB23	99	82.927	ENSCVAG00000020501	rab23	99	82.927	Cyprinodon_variegatus
ENSSSCG00000029539	RAB23	99	82.627	ENSDARG00000004151	rab23	99	82.627	Danio_rerio
ENSSSCG00000029539	RAB23	100	91.561	ENSDNOG00000015501	RAB23	100	91.561	Dasypus_novemcinctus
ENSSSCG00000029539	RAB23	99	91.525	ENSDORG00000028344	Rab23	99	91.525	Dipodomys_ordii
ENSSSCG00000029539	RAB23	92	58.696	FBgn0037364	Rab23	86	58.696	Drosophila_melanogaster
ENSSSCG00000029539	RAB23	97	64.655	ENSEBUG00000010861	-	92	64.655	Eptatretus_burgeri
ENSSSCG00000029539	RAB23	100	95.781	ENSEASG00005003529	RAB23	100	95.781	Equus_asinus_asinus
ENSSSCG00000029539	RAB23	100	94.515	ENSECAG00000013427	RAB23	100	94.515	Equus_caballus
ENSSSCG00000029539	RAB23	99	93.220	ENSEEUG00000015045	RAB23	99	93.220	Erinaceus_europaeus
ENSSSCG00000029539	RAB23	99	80.932	ENSELUG00000020788	rab23	99	82.203	Esox_lucius
ENSSSCG00000029539	RAB23	100	95.781	ENSFCAG00000044358	RAB23	100	95.781	Felis_catus
ENSSSCG00000029539	RAB23	100	86.920	ENSFALG00000001708	RAB23	100	86.920	Ficedula_albicollis
ENSSSCG00000029539	RAB23	100	91.561	ENSFDAG00000014834	RAB23	100	91.561	Fukomys_damarensis
ENSSSCG00000029539	RAB23	99	80.932	ENSFHEG00000023069	rab23	99	80.932	Fundulus_heteroclitus
ENSSSCG00000029539	RAB23	99	81.780	ENSGMOG00000005102	rab23	99	81.780	Gadus_morhua
ENSSSCG00000029539	RAB23	100	86.076	ENSGALG00000016279	RAB23	100	86.076	Gallus_gallus
ENSSSCG00000029539	RAB23	99	80.976	ENSGAFG00000007684	rab23	99	80.976	Gambusia_affinis
ENSSSCG00000029539	RAB23	99	81.780	ENSGACG00000006151	rab23	99	81.780	Gasterosteus_aculeatus
ENSSSCG00000029539	RAB23	100	89.451	ENSGAGG00000012709	RAB23	100	89.451	Gopherus_agassizii
ENSSSCG00000029539	RAB23	99	82.927	ENSHBUG00000007966	rab23	99	82.927	Haplochromis_burtoni
ENSSSCG00000029539	RAB23	100	92.405	ENSHGLG00000013030	-	100	92.405	Heterocephalus_glaber_female
ENSSSCG00000029539	RAB23	100	78.423	ENSHGLG00000009371	-	100	78.423	Heterocephalus_glaber_female
ENSSSCG00000029539	RAB23	100	92.405	ENSHGLG00100005945	-	100	92.405	Heterocephalus_glaber_male
ENSSSCG00000029539	RAB23	100	78.423	ENSHGLG00100017177	-	100	78.423	Heterocephalus_glaber_male
ENSSSCG00000029539	RAB23	99	79.024	ENSHCOG00000013919	rab23	99	79.024	Hippocampus_comes
ENSSSCG00000029539	RAB23	99	86.341	ENSIPUG00000016494	rab23	99	86.341	Ictalurus_punctatus
ENSSSCG00000029539	RAB23	100	93.671	ENSSTOG00000010962	RAB23	100	93.671	Ictidomys_tridecemlineatus
ENSSSCG00000029539	RAB23	100	93.249	ENSJJAG00000020094	Rab23	100	93.249	Jaculus_jaculus
ENSSSCG00000029539	RAB23	99	81.356	ENSKMAG00000018270	rab23	99	81.356	Kryptolebias_marmoratus
ENSSSCG00000029539	RAB23	99	81.951	ENSLBEG00000013176	rab23	99	81.951	Labrus_bergylta
ENSSSCG00000029539	RAB23	99	85.593	ENSLACG00000004025	RAB23	99	85.593	Latimeria_chalumnae
ENSSSCG00000029539	RAB23	99	85.356	ENSLOCG00000016999	rab23	99	85.356	Lepisosteus_oculatus
ENSSSCG00000029539	RAB23	100	94.515	ENSLAFG00000007209	RAB23	100	94.515	Loxodonta_africana
ENSSSCG00000029539	RAB23	100	95.359	ENSMFAG00000032369	RAB23	100	95.359	Macaca_fascicularis
ENSSSCG00000029539	RAB23	100	95.359	ENSMMUG00000018003	RAB23	100	95.359	Macaca_mulatta
ENSSSCG00000029539	RAB23	100	95.359	ENSMNEG00000037012	RAB23	100	95.359	Macaca_nemestrina
ENSSSCG00000029539	RAB23	100	95.359	ENSMLEG00000042429	RAB23	100	95.359	Mandrillus_leucophaeus
ENSSSCG00000029539	RAB23	99	84.390	ENSMAMG00000015456	rab23	99	84.390	Mastacembelus_armatus
ENSSSCG00000029539	RAB23	99	82.927	ENSMZEG00005005441	rab23	99	82.927	Maylandia_zebra
ENSSSCG00000029539	RAB23	100	86.076	ENSMGAG00000013882	RAB23	100	86.076	Meleagris_gallopavo
ENSSSCG00000029539	RAB23	100	95.781	ENSMICG00000014037	RAB23	100	95.781	Microcebus_murinus
ENSSSCG00000029539	RAB23	100	92.827	ENSMOCG00000000444	Rab23	100	92.827	Microtus_ochrogaster
ENSSSCG00000029539	RAB23	99	82.927	ENSMMOG00000007703	rab23	99	82.927	Mola_mola
ENSSSCG00000029539	RAB23	100	91.561	ENSMODG00000018720	RAB23	100	91.561	Monodelphis_domestica
ENSSSCG00000029539	RAB23	99	83.415	ENSMALG00000002136	rab23	99	83.415	Monopterus_albus
ENSSSCG00000029539	RAB23	100	92.827	MGP_CAROLIEiJ_G0014015	Rab23	100	92.827	Mus_caroli
ENSSSCG00000029539	RAB23	100	91.561	ENSMUSG00000004768	Rab23	100	91.561	Mus_musculus
ENSSSCG00000029539	RAB23	100	91.983	MGP_PahariEiJ_G0027261	Rab23	100	91.983	Mus_pahari
ENSSSCG00000029539	RAB23	100	91.983	MGP_SPRETEiJ_G0014820	Rab23	100	91.983	Mus_spretus
ENSSSCG00000029539	RAB23	100	84.034	ENSMPUG00000002642	RAB23	100	84.034	Mustela_putorius_furo
ENSSSCG00000029539	RAB23	100	94.093	ENSMLUG00000004058	RAB23	100	94.093	Myotis_lucifugus
ENSSSCG00000029539	RAB23	100	94.515	ENSNGAG00000018038	Rab23	100	94.515	Nannospalax_galili
ENSSSCG00000029539	RAB23	99	82.927	ENSNBRG00000013691	rab23	99	82.927	Neolamprologus_brichardi
ENSSSCG00000029539	RAB23	100	94.937	ENSNLEG00000027830	RAB23	100	94.937	Nomascus_leucogenys
ENSSSCG00000029539	RAB23	100	89.873	ENSODEG00000016056	RAB23	100	89.873	Octodon_degus
ENSSSCG00000029539	RAB23	99	81.013	ENSONIG00000009749	rab23	99	81.013	Oreochromis_niloticus
ENSSSCG00000029539	RAB23	100	89.451	ENSOANG00000001398	RAB23	100	89.451	Ornithorhynchus_anatinus
ENSSSCG00000029539	RAB23	100	94.937	ENSOCUG00000004816	RAB23	100	94.937	Oryctolagus_cuniculus
ENSSSCG00000029539	RAB23	99	82.927	ENSORLG00000010115	rab23	99	82.927	Oryzias_latipes
ENSSSCG00000029539	RAB23	99	82.927	ENSORLG00020020220	rab23	99	82.927	Oryzias_latipes_hni
ENSSSCG00000029539	RAB23	99	81.951	ENSORLG00015004033	rab23	99	81.951	Oryzias_latipes_hsok
ENSSSCG00000029539	RAB23	99	82.439	ENSOMEG00000001706	rab23	99	82.439	Oryzias_melastigma
ENSSSCG00000029539	RAB23	100	94.515	ENSOGAG00000005675	RAB23	100	94.515	Otolemur_garnettii
ENSSSCG00000029539	RAB23	100	97.046	ENSOARG00000005749	RAB23	100	97.046	Ovis_aries
ENSSSCG00000029539	RAB23	100	94.515	ENSPPAG00000010023	RAB23	100	94.515	Pan_paniscus
ENSSSCG00000029539	RAB23	100	95.359	ENSPPRG00000012453	RAB23	100	95.359	Panthera_pardus
ENSSSCG00000029539	RAB23	100	95.781	ENSPTIG00000009435	RAB23	100	95.781	Panthera_tigris_altaica
ENSSSCG00000029539	RAB23	100	94.937	ENSPTRG00000043341	RAB23	100	94.937	Pan_troglodytes
ENSSSCG00000029539	RAB23	100	95.359	ENSPANG00000017772	RAB23	100	95.359	Papio_anubis
ENSSSCG00000029539	RAB23	84	87.861	ENSPKIG00000024310	rab23	98	85.354	Paramormyrops_kingsleyae
ENSSSCG00000029539	RAB23	100	89.030	ENSPSIG00000015579	RAB23	100	89.030	Pelodiscus_sinensis
ENSSSCG00000029539	RAB23	99	80.000	ENSPMGG00000008577	rab23	99	80.000	Periophthalmus_magnuspinnatus
ENSSSCG00000029539	RAB23	100	92.405	ENSPEMG00000023271	Rab23	100	92.405	Peromyscus_maniculatus_bairdii
ENSSSCG00000029539	RAB23	99	68.220	ENSPMAG00000006835	-	99	68.220	Petromyzon_marinus
ENSSSCG00000029539	RAB23	100	92.405	ENSPCIG00000007267	RAB23	100	92.405	Phascolarctos_cinereus
ENSSSCG00000029539	RAB23	99	80.508	ENSPFOG00000011493	rab23	99	80.508	Poecilia_formosa
ENSSSCG00000029539	RAB23	99	80.488	ENSPLAG00000011697	rab23	99	80.488	Poecilia_latipinna
ENSSSCG00000029539	RAB23	99	80.976	ENSPMEG00000017300	rab23	99	80.976	Poecilia_mexicana
ENSSSCG00000029539	RAB23	99	80.976	ENSPREG00000022509	rab23	99	80.976	Poecilia_reticulata
ENSSSCG00000029539	RAB23	100	94.937	ENSPPYG00000016739	RAB23	100	94.937	Pongo_abelii
ENSSSCG00000029539	RAB23	100	95.359	ENSPCOG00000028471	RAB23	100	95.359	Propithecus_coquereli
ENSSSCG00000029539	RAB23	100	84.810	ENSPVAG00000017693	RAB23	100	84.810	Pteropus_vampyrus
ENSSSCG00000029539	RAB23	99	82.927	ENSPNYG00000019639	rab23	99	82.927	Pundamilia_nyererei
ENSSSCG00000029539	RAB23	99	87.317	ENSPNAG00000024728	rab23	99	87.317	Pygocentrus_nattereri
ENSSSCG00000029539	RAB23	100	91.983	ENSRNOG00000012629	Rab23	100	91.983	Rattus_norvegicus
ENSSSCG00000029539	RAB23	100	90.083	ENSRBIG00000030547	RAB23	100	90.083	Rhinopithecus_bieti
ENSSSCG00000029539	RAB23	100	94.937	ENSRROG00000035920	RAB23	100	94.937	Rhinopithecus_roxellana
ENSSSCG00000029539	RAB23	100	94.093	ENSSBOG00000033237	RAB23	100	94.093	Saimiri_boliviensis_boliviensis
ENSSSCG00000029539	RAB23	100	92.405	ENSSHAG00000006379	RAB23	100	92.405	Sarcophilus_harrisii
ENSSSCG00000029539	RAB23	99	86.341	ENSSFOG00015012604	rab23	99	86.341	Scleropages_formosus
ENSSSCG00000029539	RAB23	99	81.951	ENSSMAG00000006341	rab23	99	81.951	Scophthalmus_maximus
ENSSSCG00000029539	RAB23	99	83.415	ENSSDUG00000023508	rab23	99	83.415	Seriola_dumerili
ENSSSCG00000029539	RAB23	99	83.415	ENSSLDG00000000287	rab23	99	83.415	Seriola_lalandi_dorsalis
ENSSSCG00000029539	RAB23	100	93.671	ENSSARG00000013689	RAB23	100	93.671	Sorex_araneus
ENSSSCG00000029539	RAB23	100	89.451	ENSSPUG00000006274	RAB23	100	89.451	Sphenodon_punctatus
ENSSSCG00000029539	RAB23	99	84.466	ENSSPAG00000010373	rab23	99	84.466	Stegastes_partitus
ENSSSCG00000029539	RAB23	100	87.342	ENSTGUG00000012794	RAB23	100	87.342	Taeniopygia_guttata
ENSSSCG00000029539	RAB23	99	83.415	ENSTRUG00000015697	rab23	99	83.415	Takifugu_rubripes
ENSSSCG00000029539	RAB23	99	83.475	ENSTNIG00000016575	rab23	99	83.475	Tetraodon_nigroviridis
ENSSSCG00000029539	RAB23	100	95.781	ENSUAMG00000013367	RAB23	100	95.781	Ursus_americanus
ENSSSCG00000029539	RAB23	100	95.781	ENSUMAG00000018629	RAB23	100	95.781	Ursus_maritimus
ENSSSCG00000029539	RAB23	81	68.063	ENSVPAG00000006805	RAB23	100	68.063	Vicugna_pacos
ENSSSCG00000029539	RAB23	100	95.781	ENSVVUG00000008535	RAB23	100	95.781	Vulpes_vulpes
ENSSSCG00000029539	RAB23	99	79.325	ENSXETG00000004449	rab23	99	79.325	Xenopus_tropicalis
ENSSSCG00000029539	RAB23	99	80.085	ENSXCOG00000011864	rab23	99	80.085	Xiphophorus_couchianus
ENSSSCG00000029539	RAB23	99	80.508	ENSXMAG00000009387	rab23	99	80.508	Xiphophorus_maculatus