EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000029577 (Gene tree)
Gene ID: 100624555
Gene Symbol: -
Alias: -
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6831 bases
Position: chr2:81488187-81495017
Accession: 100624555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025249	Nop16	PF09420.10	6.6e-22	1	2
ENSSSCP00000025249	Nop16	PF09420.10	6.6e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000032480	-	942	XM_013994885	ENSSSCP00000025249	178 (aa)	XP_013850339	I3LMC8

Gene Model

Click here to download ENSSSCG00000029577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029577	-	96	52.941	ENSAPOG00000010682	-	96	52.941	Acanthochromis_polyacanthus
ENSSSCG00000029577	-	100	93.258	ENSAMEG00000006988	-	100	93.258	Ailuropoda_melanoleuca
ENSSSCG00000029577	-	96	54.118	ENSACIG00000019263	nop16	95	54.118	Amphilophus_citrinellus
ENSSSCG00000029577	-	96	53.529	ENSAOCG00000005504	nop16	96	53.529	Amphiprion_ocellaris
ENSSSCG00000029577	-	96	53.529	ENSAPEG00000006605	nop16	96	53.529	Amphiprion_percula
ENSSSCG00000029577	-	96	54.706	ENSATEG00000014089	nop16	95	54.706	Anabas_testudineus
ENSSSCG00000029577	-	99	68.182	ENSACAG00000006333	-	99	68.182	Anolis_carolinensis
ENSSSCG00000029577	-	100	82.584	ENSANAG00000027410	-	100	82.584	Aotus_nancymaae
ENSSSCG00000029577	-	100	88.202	ENSANAG00000015743	-	100	88.202	Aotus_nancymaae
ENSSSCG00000029577	-	96	55.882	ENSACLG00000025227	nop16	95	55.882	Astatotilapia_calliptera
ENSSSCG00000029577	-	94	44.910	ENSAMXG00000006843	nop16	95	44.910	Astyanax_mexicanus
ENSSSCG00000029577	-	100	95.506	ENSBTAG00000010734	NOP16	100	95.506	Bos_taurus
ENSSSCG00000029577	-	100	92.135	ENSCAFG00000016694	NOP16	100	92.135	Canis_familiaris
ENSSSCG00000029577	-	99	92.614	ENSCAFG00020011505	-	94	92.614	Canis_lupus_dingo
ENSSSCG00000029577	-	100	95.506	ENSCHIG00000022082	-	100	95.506	Capra_hircus
ENSSSCG00000029577	-	100	74.719	ENSTSYG00000032690	-	100	74.719	Carlito_syrichta
ENSSSCG00000029577	-	99	91.525	ENSTSYG00000030409	-	99	91.525	Carlito_syrichta
ENSSSCG00000029577	-	100	91.573	ENSCPOG00000026072	-	100	91.573	Cavia_porcellus
ENSSSCG00000029577	-	96	83.529	ENSCCAG00000026775	-	98	83.529	Cebus_capucinus
ENSSSCG00000029577	-	100	91.573	ENSCLAG00000015405	-	100	91.573	Chinchilla_lanigera
ENSSSCG00000029577	-	100	92.135	ENSCSAG00000009400	-	100	92.135	Chlorocebus_sabaeus
ENSSSCG00000029577	-	99	73.034	ENSCPBG00000022647	-	99	73.034	Chrysemys_picta_bellii
ENSSSCG00000029577	-	95	44.253	ENSCING00000006179	-	93	44.253	Ciona_intestinalis
ENSSSCG00000029577	-	95	41.765	ENSCSAVG00000000269	-	93	41.765	Ciona_savignyi
ENSSSCG00000029577	-	100	89.888	ENSCGRG00001004259	Nop16	100	89.888	Cricetulus_griseus_chok1gshd
ENSSSCG00000029577	-	100	89.888	ENSCGRG00000010975	Nop16	100	89.888	Cricetulus_griseus_crigri
ENSSSCG00000029577	-	96	51.744	ENSCSEG00000020523	nop16	97	51.744	Cynoglossus_semilaevis
ENSSSCG00000029577	-	96	53.529	ENSCVAG00000020140	nop16	95	53.529	Cyprinodon_variegatus
ENSSSCG00000029577	-	98	48.023	ENSDARG00000044402	nop16	99	48.023	Danio_rerio
ENSSSCG00000029577	-	100	91.011	ENSDNOG00000042890	-	100	91.011	Dasypus_novemcinctus
ENSSSCG00000029577	-	100	87.640	ENSDORG00000008872	Nop16	100	87.640	Dipodomys_ordii
ENSSSCG00000029577	-	93	43.931	ENSEBUG00000011196	nop16	95	43.931	Eptatretus_burgeri
ENSSSCG00000029577	-	100	93.820	ENSEASG00005011988	-	100	93.820	Equus_asinus_asinus
ENSSSCG00000029577	-	100	94.944	ENSECAG00000021354	NOP16	100	94.944	Equus_caballus
ENSSSCG00000029577	-	98	53.714	ENSELUG00000000401	nop16	98	53.714	Esox_lucius
ENSSSCG00000029577	-	100	92.697	ENSFCAG00000025473	-	100	92.697	Felis_catus
ENSSSCG00000029577	-	99	66.480	ENSFALG00000008553	-	99	66.480	Ficedula_albicollis
ENSSSCG00000029577	-	100	91.011	ENSFDAG00000000193	-	100	91.011	Fukomys_damarensis
ENSSSCG00000029577	-	96	54.706	ENSFHEG00000016452	nop16	95	54.706	Fundulus_heteroclitus
ENSSSCG00000029577	-	99	73.184	ENSGALG00000003355	-	99	73.184	Gallus_gallus
ENSSSCG00000029577	-	83	55.102	ENSGAFG00000011616	nop16	79	55.102	Gambusia_affinis
ENSSSCG00000029577	-	96	52.941	ENSGACG00000020819	-	98	52.941	Gasterosteus_aculeatus
ENSSSCG00000029577	-	96	48.824	ENSGACG00000020810	nop16	100	48.824	Gasterosteus_aculeatus
ENSSSCG00000029577	-	96	54.118	ENSGACG00000002618	-	98	54.118	Gasterosteus_aculeatus
ENSSSCG00000029577	-	96	52.326	ENSGACG00000003122	-	97	56.897	Gasterosteus_aculeatus
ENSSSCG00000029577	-	96	55.294	ENSHBUG00000013527	nop16	95	55.294	Haplochromis_burtoni
ENSSSCG00000029577	-	100	92.135	ENSHGLG00000013437	NOP16	100	92.135	Heterocephalus_glaber_female
ENSSSCG00000029577	-	100	92.135	ENSHGLG00100011375	NOP16	100	92.135	Heterocephalus_glaber_male
ENSSSCG00000029577	-	96	51.176	ENSHCOG00000019999	nop16	97	51.176	Hippocampus_comes
ENSSSCG00000029577	-	94	47.305	ENSIPUG00000006682	nop16	95	47.305	Ictalurus_punctatus
ENSSSCG00000029577	-	100	91.111	ENSSTOG00000004869	-	100	91.111	Ictidomys_tridecemlineatus
ENSSSCG00000029577	-	100	91.011	ENSJJAG00000017655	Nop16	100	91.011	Jaculus_jaculus
ENSSSCG00000029577	-	96	55.294	ENSKMAG00000006164	nop16	95	55.294	Kryptolebias_marmoratus
ENSSSCG00000029577	-	96	53.801	ENSLBEG00000018355	nop16	78	53.801	Labrus_bergylta
ENSSSCG00000029577	-	99	61.017	ENSLACG00000014884	nop16	100	61.017	Latimeria_chalumnae
ENSSSCG00000029577	-	96	57.647	ENSLOCG00000012348	nop16	94	57.647	Lepisosteus_oculatus
ENSSSCG00000029577	-	100	91.573	ENSLAFG00000017886	-	100	91.573	Loxodonta_africana
ENSSSCG00000029577	-	96	55.882	ENSMAMG00000021868	nop16	95	55.882	Mastacembelus_armatus
ENSSSCG00000029577	-	96	55.882	ENSMZEG00005012112	nop16	95	55.882	Maylandia_zebra
ENSSSCG00000029577	-	57	70.297	ENSMGAG00000004726	-	99	70.297	Meleagris_gallopavo
ENSSSCG00000029577	-	60	88.679	ENSMAUG00000009852	-	100	88.679	Mesocricetus_auratus
ENSSSCG00000029577	-	94	80.357	ENSMAUG00000015569	-	99	80.357	Mesocricetus_auratus
ENSSSCG00000029577	-	100	91.011	ENSMOCG00000020788	Nop16	100	91.011	Microtus_ochrogaster
ENSSSCG00000029577	-	96	53.529	ENSMMOG00000016054	nop16	99	53.529	Mola_mola
ENSSSCG00000029577	-	100	82.222	ENSMODG00000005214	-	100	82.222	Monodelphis_domestica
ENSSSCG00000029577	-	96	52.353	ENSMALG00000021263	nop16	95	52.353	Monopterus_albus
ENSSSCG00000029577	-	100	91.011	MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	Mus_caroli
ENSSSCG00000029577	-	100	91.573	ENSMUSG00000025869	Nop16	100	91.573	Mus_musculus
ENSSSCG00000029577	-	100	92.135	MGP_PahariEiJ_G0019603	Nop16	100	92.135	Mus_pahari
ENSSSCG00000029577	-	100	91.011	MGP_SPRETEiJ_G0019418	Nop16	100	91.011	Mus_spretus
ENSSSCG00000029577	-	100	93.820	ENSMPUG00000012552	-	100	93.820	Mustela_putorius_furo
ENSSSCG00000029577	-	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
ENSSSCG00000029577	-	99	89.831	ENSMLUG00000003504	-	99	89.831	Myotis_lucifugus
ENSSSCG00000029577	-	100	91.573	ENSNGAG00000018045	Nop16	100	91.573	Nannospalax_galili
ENSSSCG00000029577	-	96	54.706	ENSNBRG00000015181	nop16	96	54.706	Neolamprologus_brichardi
ENSSSCG00000029577	-	100	91.011	ENSODEG00000009586	-	100	91.011	Octodon_degus
ENSSSCG00000029577	-	96	57.647	ENSONIG00000016417	nop16	95	57.647	Oreochromis_niloticus
ENSSSCG00000029577	-	100	89.888	ENSOCUG00000013171	-	100	89.888	Oryctolagus_cuniculus
ENSSSCG00000029577	-	96	55.294	ENSORLG00000026611	nop16	95	55.294	Oryzias_latipes
ENSSSCG00000029577	-	96	58.235	ENSOMEG00000023001	nop16	95	58.235	Oryzias_melastigma
ENSSSCG00000029577	-	100	92.135	ENSOGAG00000000824	-	100	92.135	Otolemur_garnettii
ENSSSCG00000029577	-	100	95.506	ENSOARG00000002165	-	100	95.506	Ovis_aries
ENSSSCG00000029577	-	100	92.135	ENSPPAG00000035473	-	100	92.135	Pan_paniscus
ENSSSCG00000029577	-	100	92.697	ENSPPRG00000016600	-	100	92.697	Panthera_pardus
ENSSSCG00000029577	-	100	92.135	ENSPTIG00000011708	-	100	92.135	Panthera_tigris_altaica
ENSSSCG00000029577	-	100	92.135	ENSPTRG00000017560	NOP16	100	92.135	Pan_troglodytes
ENSSSCG00000029577	-	99	51.977	ENSPKIG00000009587	nop16	99	51.977	Paramormyrops_kingsleyae
ENSSSCG00000029577	-	79	65.493	ENSPSIG00000013546	-	99	65.493	Pelodiscus_sinensis
ENSSSCG00000029577	-	94	55.030	ENSPMGG00000003443	nop16	98	55.030	Periophthalmus_magnuspinnatus
ENSSSCG00000029577	-	100	91.011	ENSPEMG00000020268	Nop16	100	91.011	Peromyscus_maniculatus_bairdii
ENSSSCG00000029577	-	100	82.778	ENSPCIG00000009782	-	100	82.778	Phascolarctos_cinereus
ENSSSCG00000029577	-	96	53.529	ENSPFOG00000010549	nop16	95	53.529	Poecilia_formosa
ENSSSCG00000029577	-	77	54.745	ENSPLAG00000007124	nop16	70	54.745	Poecilia_latipinna
ENSSSCG00000029577	-	96	53.529	ENSPMEG00000008611	nop16	95	53.529	Poecilia_mexicana
ENSSSCG00000029577	-	96	53.529	ENSPREG00000012940	nop16	95	53.529	Poecilia_reticulata
ENSSSCG00000029577	-	99	92.655	ENSPPYG00000016070	-	99	92.655	Pongo_abelii
ENSSSCG00000029577	-	96	55.882	ENSPNYG00000013529	nop16	95	55.882	Pundamilia_nyererei
ENSSSCG00000029577	-	93	48.193	ENSPNAG00000016233	nop16	95	48.193	Pygocentrus_nattereri
ENSSSCG00000029577	-	100	91.573	ENSRNOG00000017284	Nop16	100	91.573	Rattus_norvegicus
ENSSSCG00000029577	-	100	82.123	ENSSHAG00000001724	-	100	82.123	Sarcophilus_harrisii
ENSSSCG00000029577	-	89	50.943	ENSSFOG00015010537	nop16	77	50.292	Scleropages_formosus
ENSSSCG00000029577	-	96	54.118	ENSSDUG00000022349	nop16	95	54.118	Seriola_dumerili
ENSSSCG00000029577	-	96	54.706	ENSSLDG00000025171	nop16	95	54.706	Seriola_lalandi_dorsalis
ENSSSCG00000029577	-	73	76.923	ENSSARG00000006699	-	61	76.923	Sorex_araneus
ENSSSCG00000029577	-	99	71.023	ENSSPUG00000006508	-	98	71.023	Sphenodon_punctatus
ENSSSCG00000029577	-	96	55.294	ENSSPAG00000011772	nop16	95	55.294	Stegastes_partitus
ENSSSCG00000029577	-	99	70.950	ENSTGUG00000000543	-	99	70.950	Taeniopygia_guttata
ENSSSCG00000029577	-	96	53.216	ENSTRUG00000020255	nop16	95	53.216	Takifugu_rubripes
ENSSSCG00000029577	-	96	54.971	ENSTNIG00000007616	nop16	95	54.971	Tetraodon_nigroviridis
ENSSSCG00000029577	-	100	92.697	ENSUAMG00000005139	-	100	92.697	Ursus_americanus
ENSSSCG00000029577	-	99	93.182	ENSVVUG00000001697	-	94	93.182	Vulpes_vulpes
ENSSSCG00000029577	-	92	58.896	ENSXETG00000022342	nop16	95	58.896	Xenopus_tropicalis
ENSSSCG00000029577	-	96	54.118	ENSXCOG00000018829	nop16	97	54.118	Xiphophorus_couchianus
ENSSSCG00000029577	-	96	54.706	ENSXMAG00000029113	nop16	95	54.706	Xiphophorus_maculatus