EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000029627 (Gene tree)
Gene ID: 100623705
Gene Symbol: -
Alias: -
Full Name: PWP2%2C small subunit processome component
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 16781 bases
Position: chr13:207015099-207031879
Accession: 100623705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000021489	Utp12	PF04003.12	5.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000028839	-	5420	XM_021071079	ENSSSCP00000021489	918 (aa)	XP_020926738	I3LBR8

Gene Model

Click here to download ENSSSCG00000029627's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000029627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000029627	-	99	86.900	ENSG00000241945	PWP2	99	87.009	Homo_sapiens
ENSSSCG00000029627	-	97	70.903	ENSAPOG00000021522	pwp2h	99	70.633	Acanthochromis_polyacanthus
ENSSSCG00000029627	-	98	88.606	ENSAMEG00000010907	-	99	88.061	Ailuropoda_melanoleuca
ENSSSCG00000029627	-	96	72.840	ENSACIG00000024109	pwp2h	98	71.727	Amphilophus_citrinellus
ENSSSCG00000029627	-	96	71.156	ENSAOCG00000014853	pwp2h	99	70.764	Amphiprion_ocellaris
ENSSSCG00000029627	-	96	71.156	ENSAPEG00000008152	pwp2h	99	70.764	Amphiprion_percula
ENSSSCG00000029627	-	96	71.477	ENSATEG00000015493	pwp2h	100	72.222	Anabas_testudineus
ENSSSCG00000029627	-	96	75.764	ENSAPLG00000010371	-	98	75.028	Anas_platyrhynchos
ENSSSCG00000029627	-	99	73.985	ENSACAG00000017861	-	99	73.546	Anolis_carolinensis
ENSSSCG00000029627	-	100	85.978	ENSANAG00000034845	-	99	86.681	Aotus_nancymaae
ENSSSCG00000029627	-	96	71.861	ENSACLG00000011425	pwp2h	98	71.319	Astatotilapia_calliptera
ENSSSCG00000029627	-	98	69.290	ENSAMXG00000007988	pwp2h	98	68.689	Astyanax_mexicanus
ENSSSCG00000029627	-	99	90.939	ENSBTAG00000007105	-	99	91.048	Bos_taurus
ENSSSCG00000029627	-	95	38.496	WBGene00018891	F55F8.3	99	37.849	Caenorhabditis_elegans
ENSSSCG00000029627	-	99	86.433	ENSCJAG00000005570	-	99	86.433	Callithrix_jacchus
ENSSSCG00000029627	-	98	88.840	ENSCAFG00000010687	-	99	88.621	Canis_familiaris
ENSSSCG00000029627	-	82	88.282	ENSCAFG00020019199	-	90	88.142	Canis_lupus_dingo
ENSSSCG00000029627	-	99	86.334	ENSCHIG00000026362	-	99	86.334	Capra_hircus
ENSSSCG00000029627	-	99	87.390	ENSTSYG00000009022	-	99	87.171	Carlito_syrichta
ENSSSCG00000029627	-	98	86.799	ENSCAPG00000017934	-	99	86.799	Cavia_aperea
ENSSSCG00000029627	-	99	86.776	ENSCPOG00000023616	-	99	86.776	Cavia_porcellus
ENSSSCG00000029627	-	99	87.377	ENSCCAG00000034616	-	99	87.500	Cebus_capucinus
ENSSSCG00000029627	-	99	86.790	ENSCATG00000032550	-	99	86.900	Cercocebus_atys
ENSSSCG00000029627	-	99	86.813	ENSCLAG00000009503	-	99	86.813	Chinchilla_lanigera
ENSSSCG00000029627	-	99	86.790	ENSCSAG00000007903	-	99	86.900	Chlorocebus_sabaeus
ENSSSCG00000029627	-	96	76.723	ENSCPBG00000018335	-	99	76.000	Chrysemys_picta_bellii
ENSSSCG00000029627	-	95	55.936	ENSCSAVG00000004186	-	97	55.936	Ciona_savignyi
ENSSSCG00000029627	-	99	87.432	ENSCANG00000028013	-	99	87.541	Colobus_angolensis_palliatus
ENSSSCG00000029627	-	99	86.075	ENSCGRG00001020074	Pwp2	99	85.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000029627	-	99	86.075	ENSCGRG00000003750	Pwp2	99	85.000	Cricetulus_griseus_crigri
ENSSSCG00000029627	-	96	71.380	ENSCSEG00000000861	pwp2h	98	70.595	Cynoglossus_semilaevis
ENSSSCG00000029627	-	96	71.670	ENSCVAG00000000996	pwp2h	99	70.769	Cyprinodon_variegatus
ENSSSCG00000029627	-	98	66.812	ENSDARG00000037109	pwp2h	98	66.594	Danio_rerio
ENSSSCG00000029627	-	86	83.375	ENSDNOG00000012128	-	99	83.249	Dasypus_novemcinctus
ENSSSCG00000029627	-	92	81.560	ENSDORG00000003015	Pwp2	94	80.997	Dipodomys_ordii
ENSSSCG00000029627	-	97	47.116	FBgn0033557	CG12325	97	47.334	Drosophila_melanogaster
ENSSSCG00000029627	-	86	62.864	ENSEBUG00000003140	pwp2h	96	62.673	Eptatretus_burgeri
ENSSSCG00000029627	-	97	91.853	ENSEASG00005001651	-	99	90.703	Equus_asinus_asinus
ENSSSCG00000029627	-	98	91.880	ENSECAG00000006090	-	99	91.027	Equus_caballus
ENSSSCG00000029627	-	98	69.834	ENSELUG00000001878	pwp2h	98	70.055	Esox_lucius
ENSSSCG00000029627	-	99	88.184	ENSFCAG00000004487	-	99	88.731	Felis_catus
ENSSSCG00000029627	-	98	75.444	ENSFALG00000012300	-	99	75.444	Ficedula_albicollis
ENSSSCG00000029627	-	98	85.604	ENSFDAG00000016140	-	99	85.369	Fukomys_damarensis
ENSSSCG00000029627	-	94	72.422	ENSFHEG00000009078	pwp2h	100	72.274	Fundulus_heteroclitus
ENSSSCG00000029627	-	96	69.852	ENSGMOG00000016522	pwp2h	98	69.778	Gadus_morhua
ENSSSCG00000029627	-	98	75.195	ENSGALG00000045726	-	99	75.195	Gallus_gallus
ENSSSCG00000029627	-	97	71.492	ENSGAFG00000011340	pwp2h	98	71.413	Gambusia_affinis
ENSSSCG00000029627	-	96	70.993	ENSGACG00000014928	pwp2h	99	69.904	Gasterosteus_aculeatus
ENSSSCG00000029627	-	98	76.444	ENSGAGG00000005377	-	99	76.333	Gopherus_agassizii
ENSSSCG00000029627	-	99	86.369	ENSGGOG00000041875	-	99	86.478	Gorilla_gorilla
ENSSSCG00000029627	-	96	72.085	ENSHBUG00000005530	pwp2h	98	71.538	Haplochromis_burtoni
ENSSSCG00000029627	-	99	85.099	ENSHGLG00000017401	-	99	84.989	Heterocephalus_glaber_female
ENSSSCG00000029627	-	98	84.624	ENSHGLG00100013888	-	98	84.513	Heterocephalus_glaber_male
ENSSSCG00000029627	-	97	68.638	ENSHCOG00000018121	pwp2h	97	67.841	Hippocampus_comes
ENSSSCG00000029627	-	98	67.896	ENSIPUG00000014074	pwp2h	99	67.787	Ictalurus_punctatus
ENSSSCG00000029627	-	99	85.996	ENSSTOG00000014194	-	99	85.667	Ictidomys_tridecemlineatus
ENSSSCG00000029627	-	99	85.963	ENSJJAG00000013039	Pwp2	99	85.637	Jaculus_jaculus
ENSSSCG00000029627	-	96	71.332	ENSKMAG00000003143	pwp2h	99	70.843	Kryptolebias_marmoratus
ENSSSCG00000029627	-	96	70.913	ENSLBEG00000006388	pwp2h	98	70.288	Labrus_bergylta
ENSSSCG00000029627	-	93	71.145	ENSLACG00000006084	pwp2h	98	71.145	Latimeria_chalumnae
ENSSSCG00000029627	-	99	69.466	ENSLOCG00000003663	pwp2h	99	69.029	Lepisosteus_oculatus
ENSSSCG00000029627	-	94	88.953	ENSLAFG00000003871	-	100	88.953	Loxodonta_africana
ENSSSCG00000029627	-	99	86.790	ENSMFAG00000044448	-	99	86.900	Macaca_fascicularis
ENSSSCG00000029627	-	99	86.790	ENSMMUG00000005271	PWP2	99	86.900	Macaca_mulatta
ENSSSCG00000029627	-	99	86.790	ENSMNEG00000030782	-	99	86.900	Macaca_nemestrina
ENSSSCG00000029627	-	99	86.790	ENSMLEG00000039860	-	99	86.900	Mandrillus_leucophaeus
ENSSSCG00000029627	-	96	71.590	ENSMAMG00000022327	pwp2h	99	70.326	Mastacembelus_armatus
ENSSSCG00000029627	-	96	71.749	ENSMZEG00005015448	pwp2h	98	71.209	Maylandia_zebra
ENSSSCG00000029627	-	99	67.947	ENSMGAG00000014596	-	98	68.142	Meleagris_gallopavo
ENSSSCG00000029627	-	91	60.280	ENSMAUG00000020265	Pwp2	92	59.813	Mesocricetus_auratus
ENSSSCG00000029627	-	99	87.719	ENSMICG00000001002	-	99	87.719	Microcebus_murinus
ENSSSCG00000029627	-	99	85.839	ENSMOCG00000003844	Pwp2	99	85.730	Microtus_ochrogaster
ENSSSCG00000029627	-	95	70.535	ENSMMOG00000000882	pwp2h	100	70.535	Mola_mola
ENSSSCG00000029627	-	99	79.736	ENSMODG00000021081	-	99	79.626	Monodelphis_domestica
ENSSSCG00000029627	-	98	71.571	ENSMALG00000000821	pwp2h	99	71.823	Monopterus_albus
ENSSSCG00000029627	-	99	85.495	MGP_CAROLIEiJ_G0015505	Pwp2	99	85.495	Mus_caroli
ENSSSCG00000029627	-	99	85.840	ENSMUSG00000032834	Pwp2	99	85.291	Mus_musculus
ENSSSCG00000029627	-	99	85.620	MGP_PahariEiJ_G0030918	Pwp2	99	85.181	Mus_pahari
ENSSSCG00000029627	-	99	85.730	MGP_SPRETEiJ_G0016318	Pwp2	99	85.181	Mus_spretus
ENSSSCG00000029627	-	87	87.814	ENSMPUG00000009936	-	99	88.065	Mustela_putorius_furo
ENSSSCG00000029627	-	98	83.222	ENSMLUG00000004823	-	99	82.732	Myotis_lucifugus
ENSSSCG00000029627	-	99	86.990	ENSNGAG00000021106	Pwp2	99	86.990	Nannospalax_galili
ENSSSCG00000029627	-	98	69.338	ENSNBRG00000016527	pwp2h	99	69.658	Neolamprologus_brichardi
ENSSSCG00000029627	-	96	87.232	ENSNLEG00000001928	-	99	87.232	Nomascus_leucogenys
ENSSSCG00000029627	-	99	85.355	ENSODEG00000013073	-	100	85.355	Octodon_degus
ENSSSCG00000029627	-	96	71.749	ENSONIG00000007136	pwp2h	98	71.319	Oreochromis_niloticus
ENSSSCG00000029627	-	99	76.118	ENSOANG00000006477	-	99	76.196	Ornithorhynchus_anatinus
ENSSSCG00000029627	-	99	71.053	ENSORLG00000000066	pwp2h	100	70.788	Oryzias_latipes
ENSSSCG00000029627	-	99	71.272	ENSORLG00020000321	pwp2h	100	71.007	Oryzias_latipes_hni
ENSSSCG00000029627	-	99	67.325	ENSORLG00015014731	pwp2h	100	67.068	Oryzias_latipes_hsok
ENSSSCG00000029627	-	97	56.354	ENSOMEG00000020671	pwp2h	76	72.713	Oryzias_melastigma
ENSSSCG00000029627	-	99	86.090	ENSOGAG00000012473	-	100	86.199	Otolemur_garnettii
ENSSSCG00000029627	-	99	88.344	ENSOARG00000011672	-	99	90.440	Ovis_aries
ENSSSCG00000029627	-	97	87.640	ENSPPAG00000037874	-	99	86.681	Pan_paniscus
ENSSSCG00000029627	-	99	88.403	ENSPPRG00000011088	-	99	89.059	Panthera_pardus
ENSSSCG00000029627	-	99	80.285	ENSPTIG00000020872	-	99	80.285	Panthera_tigris_altaica
ENSSSCG00000029627	-	99	86.681	ENSPTRG00000013969	-	99	86.790	Pan_troglodytes
ENSSSCG00000029627	-	99	86.681	ENSPANG00000006267	-	99	86.681	Papio_anubis
ENSSSCG00000029627	-	98	69.956	ENSPKIG00000002693	pwp2h	100	72.652	Paramormyrops_kingsleyae
ENSSSCG00000029627	-	96	75.480	ENSPSIG00000009783	-	99	74.744	Pelodiscus_sinensis
ENSSSCG00000029627	-	96	71.558	ENSPMGG00000022349	pwp2h	99	70.764	Periophthalmus_magnuspinnatus
ENSSSCG00000029627	-	96	87.627	ENSPEMG00000009968	Pwp2	98	86.593	Peromyscus_maniculatus_bairdii
ENSSSCG00000029627	-	99	79.626	ENSPCIG00000014548	-	99	79.515	Phascolarctos_cinereus
ENSSSCG00000029627	-	96	72.604	ENSPFOG00000014764	pwp2h	99	71.634	Poecilia_formosa
ENSSSCG00000029627	-	96	72.492	ENSPLAG00000011559	pwp2h	99	71.523	Poecilia_latipinna
ENSSSCG00000029627	-	96	72.717	ENSPMEG00000021347	pwp2h	99	71.744	Poecilia_mexicana
ENSSSCG00000029627	-	96	72.912	ENSPREG00000015887	pwp2h	99	71.965	Poecilia_reticulata
ENSSSCG00000029627	-	99	86.871	ENSPPYG00000011478	-	99	86.761	Pongo_abelii
ENSSSCG00000029627	-	99	83.058	ENSPCAG00000004676	-	99	83.058	Procavia_capensis
ENSSSCG00000029627	-	99	87.157	ENSPCOG00000012856	-	99	87.047	Propithecus_coquereli
ENSSSCG00000029627	-	99	81.481	ENSPVAG00000002312	-	99	81.264	Pteropus_vampyrus
ENSSSCG00000029627	-	74	70.290	ENSPNYG00000008379	pwp2h	97	69.633	Pundamilia_nyererei
ENSSSCG00000029627	-	96	69.050	ENSPNAG00000017876	pwp2h	99	67.641	Pygocentrus_nattereri
ENSSSCG00000029627	-	99	85.824	ENSRNOG00000001210	Pwp2	99	84.891	Rattus_norvegicus
ENSSSCG00000029627	-	99	86.776	ENSRBIG00000034365	-	99	86.885	Rhinopithecus_bieti
ENSSSCG00000029627	-	99	86.885	ENSRROG00000031946	-	99	88.889	Rhinopithecus_roxellana
ENSSSCG00000029627	-	98	43.764	YCR057C	PWP2	94	43.559	Saccharomyces_cerevisiae
ENSSSCG00000029627	-	99	86.608	ENSSBOG00000034554	-	99	87.047	Saimiri_boliviensis_boliviensis
ENSSSCG00000029627	-	99	70.358	ENSSFOG00015003316	pwp2	99	70.330	Scleropages_formosus
ENSSSCG00000029627	-	96	72.593	ENSSMAG00000011839	pwp2h	99	71.164	Scophthalmus_maximus
ENSSSCG00000029627	-	98	71.038	ENSSDUG00000011462	pwp2h	98	72.111	Seriola_dumerili
ENSSSCG00000029627	-	96	72.523	ENSSLDG00000008651	pwp2h	99	71.212	Seriola_lalandi_dorsalis
ENSSSCG00000029627	-	97	76.398	ENSSPUG00000002980	-	99	76.174	Sphenodon_punctatus
ENSSSCG00000029627	-	96	71.685	ENSSPAG00000023368	pwp2h	98	71.224	Stegastes_partitus
ENSSSCG00000029627	-	96	75.170	ENSTGUG00000005996	-	100	75.170	Taeniopygia_guttata
ENSSSCG00000029627	-	61	71.250	ENSTGUG00000018216	-	100	71.250	Taeniopygia_guttata
ENSSSCG00000029627	-	96	71.186	ENSTRUG00000013258	pwp2h	98	70.880	Takifugu_rubripes
ENSSSCG00000029627	-	98	69.248	ENSTNIG00000010613	pwp2h	99	68.695	Tetraodon_nigroviridis
ENSSSCG00000029627	-	81	90.133	ENSTBEG00000015597	-	88	89.564	Tupaia_belangeri
ENSSSCG00000029627	-	94	90.454	ENSTTRG00000006728	-	100	90.338	Tursiops_truncatus
ENSSSCG00000029627	-	99	88.126	ENSUAMG00000019031	-	99	88.387	Ursus_americanus
ENSSSCG00000029627	-	99	85.433	ENSUMAG00000025481	-	99	85.652	Ursus_maritimus
ENSSSCG00000029627	-	98	89.012	ENSVVUG00000024125	-	98	88.852	Vulpes_vulpes
ENSSSCG00000029627	-	67	63.095	ENSXETG00000018002	pwp2	89	60.119	Xenopus_tropicalis
ENSSSCG00000029627	-	96	68.623	ENSXCOG00000020474	pwp2h	98	68.263	Xiphophorus_couchianus
ENSSSCG00000029627	-	97	71.987	ENSXMAG00000008124	pwp2h	98	71.987	Xiphophorus_maculatus