EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000030042 (Gene tree)
Gene ID: 100623993
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 48925 bases
Position: chr2:77275013-77323937
Accession: 100623993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000048860	ResIII	PF04851.15	6.6e-06	1	1
ENSSSCP00000047597	ResIII	PF04851.15	7.3e-06	1	1
ENSSSCP00000053316	ResIII	PF04851.15	7.3e-06	1	1
ENSSSCP00000026501	ResIII	PF04851.15	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000050695	SBNO2-202	5031	XM_021084268	ENSSSCP00000047597	1368 (aa)	XP_020939927	A0A287BB71
ENSSSCT00000042316	SBNO2-203	8425	-	ENSSSCP00000053316	1368 (aa)	-	A0A287BB71
ENSSSCT00000066000	SBNO2-204	8140	-	ENSSSCP00000048860	1286 (aa)	-	A0A287AYA0
ENSSSCT00000022580	SBNO2-201	4974	-	ENSSSCP00000026501	1369 (aa)	-	I3LQW9

Gene Model

Click here to download ENSSSCG00000030042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000030042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000030042	SBNO2	73	68.481	ENSSSCG00000009776	SBNO1	71	68.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000030042	SBNO2	98	86.459	ENSG00000064932	SBNO2	97	87.011	Homo_sapiens
ENSSSCG00000030042	SBNO2	89	69.705	ENSAPOG00000003185	si:ch73-63e15.2	88	67.903	Acanthochromis_polyacanthus
ENSSSCG00000030042	SBNO2	90	69.290	ENSAOCG00000016581	si:ch73-63e15.2	96	69.425	Amphiprion_ocellaris
ENSSSCG00000030042	SBNO2	90	69.204	ENSAPEG00000008862	si:ch73-63e15.2	76	69.376	Amphiprion_percula
ENSSSCG00000030042	SBNO2	90	68.435	ENSATEG00000023838	si:ch73-63e15.2	93	71.069	Anabas_testudineus
ENSSSCG00000030042	SBNO2	95	73.071	ENSAPLG00000007158	SBNO2	98	73.223	Anas_platyrhynchos
ENSSSCG00000030042	SBNO2	98	86.063	ENSANAG00000026685	SBNO2	97	85.984	Aotus_nancymaae
ENSSSCG00000030042	SBNO2	89	68.983	ENSACLG00000005090	si:ch73-63e15.2	78	64.878	Astatotilapia_calliptera
ENSSSCG00000030042	SBNO2	89	68.827	ENSAMXG00000018868	sbno2a	99	69.132	Astyanax_mexicanus
ENSSSCG00000030042	SBNO2	90	69.244	ENSAMXG00000015881	si:ch73-63e15.2	83	69.449	Astyanax_mexicanus
ENSSSCG00000030042	SBNO2	97	93.840	ENSBTAG00000020780	SBNO2	98	93.012	Bos_taurus
ENSSSCG00000030042	SBNO2	97	91.523	ENSCAFG00000019543	SBNO2	98	91.424	Canis_familiaris
ENSSSCG00000030042	SBNO2	92	92.526	ENSCAFG00020017115	SBNO2	99	92.627	Canis_lupus_dingo
ENSSSCG00000030042	SBNO2	97	94.074	ENSCHIG00000026127	SBNO2	98	93.010	Capra_hircus
ENSSSCG00000030042	SBNO2	87	87.666	ENSCAPG00000005731	SBNO2	99	84.691	Cavia_aperea
ENSSSCG00000030042	SBNO2	95	84.130	ENSCPOG00000007477	SBNO2	98	81.852	Cavia_porcellus
ENSSSCG00000030042	SBNO2	98	86.131	ENSCCAG00000037518	SBNO2	97	86.052	Cebus_capucinus
ENSSSCG00000030042	SBNO2	98	87.236	ENSCATG00000037046	SBNO2	97	87.480	Cercocebus_atys
ENSSSCG00000030042	SBNO2	90	90.113	ENSCLAG00000010178	SBNO2	99	90.286	Chinchilla_lanigera
ENSSSCG00000030042	SBNO2	96	88.235	ENSCSAG00000012317	SBNO2	97	86.577	Chlorocebus_sabaeus
ENSSSCG00000030042	SBNO2	95	72.514	ENSCPBG00000008920	SBNO2	92	77.146	Chrysemys_picta_bellii
ENSSSCG00000030042	SBNO2	87	88.781	ENSCANG00000036745	SBNO2	98	88.624	Colobus_angolensis_palliatus
ENSSSCG00000030042	SBNO2	97	83.667	ENSCGRG00001023960	Sbno2	99	81.037	Cricetulus_griseus_chok1gshd
ENSSSCG00000030042	SBNO2	97	85.600	ENSCGRG00000011984	Sbno2	99	82.828	Cricetulus_griseus_crigri
ENSSSCG00000030042	SBNO2	88	66.667	ENSCSEG00000006856	si:ch73-63e15.2	90	70.192	Cynoglossus_semilaevis
ENSSSCG00000030042	SBNO2	90	68.515	ENSCVAG00000005663	si:ch73-63e15.2	77	68.515	Cyprinodon_variegatus
ENSSSCG00000030042	SBNO2	90	63.905	ENSDARG00000098801	sbno2a	95	61.178	Danio_rerio
ENSSSCG00000030042	SBNO2	90	68.471	ENSDARG00000016188	SBNO2	83	68.116	Danio_rerio
ENSSSCG00000030042	SBNO2	99	86.724	ENSDORG00000002916	Sbno2	99	85.735	Dipodomys_ordii
ENSSSCG00000030042	SBNO2	98	90.394	ENSEASG00005021621	SBNO2	99	89.752	Equus_asinus_asinus
ENSSSCG00000030042	SBNO2	98	90.315	ENSECAG00000011827	SBNO2	98	90.472	Equus_caballus
ENSSSCG00000030042	SBNO2	88	69.599	ENSELUG00000020457	si:ch73-63e15.2	78	69.584	Esox_lucius
ENSSSCG00000030042	SBNO2	93	75.407	ENSFALG00000013988	SBNO2	94	73.518	Ficedula_albicollis
ENSSSCG00000030042	SBNO2	97	82.348	ENSFDAG00000015186	SBNO2	99	80.133	Fukomys_damarensis
ENSSSCG00000030042	SBNO2	90	68.092	ENSFHEG00000022262	si:ch73-63e15.2	76	68.092	Fundulus_heteroclitus
ENSSSCG00000030042	SBNO2	92	67.357	ENSGMOG00000007542	si:ch73-63e15.2	95	69.324	Gadus_morhua
ENSSSCG00000030042	SBNO2	98	70.060	ENSGALG00000037522	SBNO2	87	71.750	Gallus_gallus
ENSSSCG00000030042	SBNO2	90	68.686	ENSGAFG00000004860	si:ch73-63e15.2	91	68.601	Gambusia_affinis
ENSSSCG00000030042	SBNO2	88	69.660	ENSGACG00000013190	si:ch73-63e15.2	95	69.370	Gasterosteus_aculeatus
ENSSSCG00000030042	SBNO2	97	71.785	ENSGAGG00000008348	SBNO2	90	75.802	Gopherus_agassizii
ENSSSCG00000030042	SBNO2	89	69.217	ENSHBUG00000010742	si:ch73-63e15.2	76	69.324	Haplochromis_burtoni
ENSSSCG00000030042	SBNO2	98	86.798	ENSHGLG00000008739	SBNO2	98	85.672	Heterocephalus_glaber_female
ENSSSCG00000030042	SBNO2	90	90.807	ENSHGLG00100005269	SBNO2	99	90.980	Heterocephalus_glaber_male
ENSSSCG00000030042	SBNO2	88	68.098	ENSHCOG00000000884	si:ch73-63e15.2	84	69.466	Hippocampus_comes
ENSSSCG00000030042	SBNO2	89	68.361	ENSIPUG00000019672	sbno2	93	70.924	Ictalurus_punctatus
ENSSSCG00000030042	SBNO2	88	69.869	ENSIPUG00000000537	si:ch73-63e15.2	83	69.913	Ictalurus_punctatus
ENSSSCG00000030042	SBNO2	96	88.969	ENSSTOG00000025832	SBNO2	98	87.649	Ictidomys_tridecemlineatus
ENSSSCG00000030042	SBNO2	96	83.803	ENSJJAG00000017397	Sbno2	99	81.893	Jaculus_jaculus
ENSSSCG00000030042	SBNO2	90	68.734	ENSKMAG00000005541	si:ch73-63e15.2	77	69.416	Kryptolebias_marmoratus
ENSSSCG00000030042	SBNO2	90	68.224	ENSLBEG00000025016	si:ch73-63e15.2	95	70.570	Labrus_bergylta
ENSSSCG00000030042	SBNO2	50	63.118	ENSLBEG00000005937	-	99	63.868	Labrus_bergylta
ENSSSCG00000030042	SBNO2	51	72.659	ENSLACG00000012598	SBNO2	100	74.135	Latimeria_chalumnae
ENSSSCG00000030042	SBNO2	96	67.252	ENSLOCG00000004643	si:ch73-63e15.2	84	71.268	Lepisosteus_oculatus
ENSSSCG00000030042	SBNO2	96	83.333	ENSLAFG00000008824	SBNO2	99	82.855	Loxodonta_africana
ENSSSCG00000030042	SBNO2	98	86.063	ENSMFAG00000040030	SBNO2	98	86.063	Macaca_fascicularis
ENSSSCG00000030042	SBNO2	96	88.226	ENSMMUG00000010886	SBNO2	97	86.642	Macaca_mulatta
ENSSSCG00000030042	SBNO2	98	87.324	ENSMNEG00000039927	SBNO2	97	87.324	Macaca_nemestrina
ENSSSCG00000030042	SBNO2	82	90.512	ENSMLEG00000038556	SBNO2	98	88.205	Mandrillus_leucophaeus
ENSSSCG00000030042	SBNO2	90	68.750	ENSMAMG00000018758	si:ch73-63e15.2	75	68.921	Mastacembelus_armatus
ENSSSCG00000030042	SBNO2	89	69.130	ENSMZEG00005010682	si:ch73-63e15.2	78	65.008	Maylandia_zebra
ENSSSCG00000030042	SBNO2	97	74.326	ENSMGAG00000003801	SBNO2	97	74.283	Meleagris_gallopavo
ENSSSCG00000030042	SBNO2	98	84.992	ENSMAUG00000008034	Sbno2	99	82.929	Mesocricetus_auratus
ENSSSCG00000030042	SBNO2	97	89.872	ENSMICG00000013071	SBNO2	99	86.681	Microcebus_murinus
ENSSSCG00000030042	SBNO2	97	84.127	ENSMOCG00000010504	Sbno2	99	82.754	Microtus_ochrogaster
ENSSSCG00000030042	SBNO2	97	74.847	ENSMODG00000005382	SBNO2	92	76.816	Monodelphis_domestica
ENSSSCG00000030042	SBNO2	74	65.231	ENSMALG00000021831	si:ch73-63e15.2	98	64.499	Monopterus_albus
ENSSSCG00000030042	SBNO2	97	85.000	ENSMUSG00000035673	Sbno2	99	85.611	Mus_musculus
ENSSSCG00000030042	SBNO2	97	85.147	MGP_PahariEiJ_G0030976	Sbno2	99	83.198	Mus_pahari
ENSSSCG00000030042	SBNO2	97	85.147	MGP_SPRETEiJ_G0016381	Sbno2	98	85.362	Mus_spretus
ENSSSCG00000030042	SBNO2	79	91.682	ENSMPUG00000008747	SBNO2	100	91.682	Mustela_putorius_furo
ENSSSCG00000030042	SBNO2	97	83.426	ENSNGAG00000004308	Sbno2	99	81.716	Nannospalax_galili
ENSSSCG00000030042	SBNO2	86	68.108	ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	Neolamprologus_brichardi
ENSSSCG00000030042	SBNO2	91	85.851	ENSNLEG00000001305	SBNO2	97	85.769	Nomascus_leucogenys
ENSSSCG00000030042	SBNO2	77	75.344	ENSMEUG00000013511	-	81	74.921	Notamacropus_eugenii
ENSSSCG00000030042	SBNO2	95	86.498	ENSOPRG00000017238	SBNO2	100	86.252	Ochotona_princeps
ENSSSCG00000030042	SBNO2	97	84.683	ENSODEG00000011822	SBNO2	98	83.763	Octodon_degus
ENSSSCG00000030042	SBNO2	89	69.391	ENSONIG00000002490	si:ch73-63e15.2	92	68.399	Oreochromis_niloticus
ENSSSCG00000030042	SBNO2	89	67.466	ENSORLG00000000913	si:ch73-63e15.2	78	66.808	Oryzias_latipes
ENSSSCG00000030042	SBNO2	89	67.466	ENSORLG00020010978	si:ch73-63e15.2	78	66.808	Oryzias_latipes_hni
ENSSSCG00000030042	SBNO2	89	67.551	ENSORLG00015000202	si:ch73-63e15.2	78	66.892	Oryzias_latipes_hsok
ENSSSCG00000030042	SBNO2	89	67.767	ENSOMEG00000000359	si:ch73-63e15.2	79	64.167	Oryzias_melastigma
ENSSSCG00000030042	SBNO2	97	88.009	ENSOARG00000011130	SBNO2	98	86.834	Ovis_aries
ENSSSCG00000030042	SBNO2	98	85.159	ENSPPAG00000032482	SBNO2	98	85.559	Pan_paniscus
ENSSSCG00000030042	SBNO2	98	86.963	ENSPTRG00000010185	SBNO2	97	87.363	Pan_troglodytes
ENSSSCG00000030042	SBNO2	98	83.868	ENSPANG00000009658	SBNO2	97	84.314	Papio_anubis
ENSSSCG00000030042	SBNO2	89	67.444	ENSPKIG00000024201	si:ch73-63e15.2	83	68.244	Paramormyrops_kingsleyae
ENSSSCG00000030042	SBNO2	83	68.978	ENSPKIG00000009707	-	87	69.757	Paramormyrops_kingsleyae
ENSSSCG00000030042	SBNO2	76	80.081	ENSPSIG00000002852	SBNO2	100	80.183	Pelodiscus_sinensis
ENSSSCG00000030042	SBNO2	89	67.686	ENSPMGG00000014375	si:ch73-63e15.2	87	67.867	Periophthalmus_magnuspinnatus
ENSSSCG00000030042	SBNO2	96	82.850	ENSPEMG00000024122	Sbno2	99	80.385	Peromyscus_maniculatus_bairdii
ENSSSCG00000030042	SBNO2	97	75.580	ENSPCIG00000011264	SBNO2	92	77.048	Phascolarctos_cinereus
ENSSSCG00000030042	SBNO2	89	69.264	ENSPFOG00000004096	si:ch73-63e15.2	99	68.957	Poecilia_formosa
ENSSSCG00000030042	SBNO2	90	68.771	ENSPLAG00000014653	si:ch73-63e15.2	77	68.771	Poecilia_latipinna
ENSSSCG00000030042	SBNO2	90	68.601	ENSPMEG00000002129	si:ch73-63e15.2	92	70.010	Poecilia_mexicana
ENSSSCG00000030042	SBNO2	89	69.437	ENSPREG00000006755	si:ch73-63e15.2	77	66.081	Poecilia_reticulata
ENSSSCG00000030042	SBNO2	92	83.977	ENSPCAG00000012256	SBNO2	98	77.769	Procavia_capensis
ENSSSCG00000030042	SBNO2	97	81.652	ENSPCOG00000015216	SBNO2	98	80.148	Propithecus_coquereli
ENSSSCG00000030042	SBNO2	90	68.659	ENSPNYG00000019926	si:ch73-63e15.2	77	68.559	Pundamilia_nyererei
ENSSSCG00000030042	SBNO2	89	67.885	ENSPNAG00000026609	sbno2a	82	70.457	Pygocentrus_nattereri
ENSSSCG00000030042	SBNO2	90	69.502	ENSPNAG00000020260	si:ch73-63e15.2	83	69.502	Pygocentrus_nattereri
ENSSSCG00000030042	SBNO2	97	85.588	ENSRNOG00000013987	Sbno2	97	85.794	Rattus_norvegicus
ENSSSCG00000030042	SBNO2	95	79.173	ENSRBIG00000009740	SBNO2	95	80.837	Rhinopithecus_bieti
ENSSSCG00000030042	SBNO2	87	89.753	ENSRROG00000044671	SBNO2	96	89.753	Rhinopithecus_roxellana
ENSSSCG00000030042	SBNO2	97	86.338	ENSSBOG00000023562	SBNO2	96	86.306	Saimiri_boliviensis_boliviensis
ENSSSCG00000030042	SBNO2	89	79.723	ENSSHAG00000010241	SBNO2	99	79.723	Sarcophilus_harrisii
ENSSSCG00000030042	SBNO2	90	66.296	ENSSFOG00015005861	si:ch73-63e15.2	93	66.895	Scleropages_formosus
ENSSSCG00000030042	SBNO2	90	68.151	ENSSMAG00000012489	si:ch73-63e15.2	74	68.322	Scophthalmus_maximus
ENSSSCG00000030042	SBNO2	90	68.980	ENSSDUG00000003527	si:ch73-63e15.2	74	69.152	Seriola_dumerili
ENSSSCG00000030042	SBNO2	90	68.895	ENSSLDG00000004623	si:ch73-63e15.2	74	69.066	Seriola_lalandi_dorsalis
ENSSSCG00000030042	SBNO2	90	69.692	ENSSPAG00000017717	si:ch73-63e15.2	76	69.692	Stegastes_partitus
ENSSSCG00000030042	SBNO2	88	68.421	ENSTRUG00000018193	si:ch73-63e15.2	87	68.421	Takifugu_rubripes
ENSSSCG00000030042	SBNO2	84	93.176	ENSUAMG00000006568	SBNO2	97	91.688	Ursus_americanus
ENSSSCG00000030042	SBNO2	97	87.885	ENSVVUG00000022823	SBNO2	94	92.925	Vulpes_vulpes
ENSSSCG00000030042	SBNO2	80	79.010	ENSXETG00000021579	sbno2	91	77.624	Xenopus_tropicalis
ENSSSCG00000030042	SBNO2	74	70.217	ENSXCOG00000009209	si:ch73-63e15.2	91	70.626	Xiphophorus_couchianus
ENSSSCG00000030042	SBNO2	90	68.515	ENSXMAG00000012091	si:ch73-63e15.2	81	71.854	Xiphophorus_maculatus