EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000030049 (Gene tree)
Gene ID: 100622274
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U like 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 34598 bases
Position: chr6:49280296-49314893
Accession: 100622274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000027650	SAP	PF02037.27	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000025796	-	2490	XM_021094416	ENSSSCP00000027650	829 (aa)	XP_020950075	I3LU51

Gene Model

Click here to download ENSSSCG00000030049's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000030049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000030049	-	52	49.539	ENSSSCG00000028542	-	83	41.911
ENSSSCG00000030049	-	61	51.786	ENSSSCG00000010877	HNRNPU	81	48.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000030049	-	56	63.158	ENSATEG00000014827	-	87	34.426	Anabas_testudineus
ENSSSCG00000030049	-	96	58.303	ENSDARG00000079780	hnrnpul1l	77	64.103	Danio_rerio
ENSSSCG00000030049	-	72	65.842	ENSMALG00000009541	hnrnpul1	76	61.978	Monopterus_albus
ENSSSCG00000030049	-	51	37.995	ENSORLG00015016595	-	67	36.916	Oryzias_latipes_hsok
ENSSSCG00000030049	-	100	57.509	ENSPNAG00000030085	hnrnpul1	78	65.373	Pygocentrus_nattereri
ENSSSCG00000030049	-	100	91.425	ENSUAMG00000010118	-	100	90.962	Ursus_americanus