EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000030284 (Gene tree)
Gene ID: 100621644
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 27646 bases
Position: chr6:85567458-85595103
Accession: 100621644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000046008	RRM_1	PF00076.22	3.5e-27	1	2
ENSSSCP00000046008	RRM_1	PF00076.22	3.5e-27	2	2
ENSSSCP00000038988	RRM_1	PF00076.22	9.5e-26	1	2
ENSSSCP00000038988	RRM_1	PF00076.22	9.5e-26	2	2
ENSSSCP00000032963	RRM_1	PF00076.22	1.1e-15	1	1
ENSSSCP00000023591	RRM_1	PF00076.22	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042841	TRNAU1AP-203	3477	-	ENSSSCP00000038988	295 (aa)	-	A0A287A4X3
ENSSSCT00000028704	TRNAU1AP-201	1223	-	ENSSSCP00000023591	177 (aa)	-	I3LHP4
ENSSSCT00000060833	TRNAU1AP-204	3345	-	ENSSSCP00000032963	251 (aa)	-	A0A286ZNB7
ENSSSCT00000051127	TRNAU1AP-202	3453	XM_003356244	ENSSSCP00000046008	287 (aa)	XP_003356292	A0A287AQ52

Gene Model

Click here to download ENSSSCG00000030284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000030284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000030284	TRNAU1AP	78	30.198	ENSSSCG00000023409	TIA1	64	32.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSG00000180098	TRNAU1AP	100	100.000	Homo_sapiens
ENSSSCG00000030284	TRNAU1AP	98	58.416	ENSAPOG00000007148	TRNAU1AP	98	58.416	Acanthochromis_polyacanthus
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSAMEG00000011367	TRNAU1AP	100	98.955	Ailuropoda_melanoleuca
ENSSSCG00000030284	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSSSCG00000030284	TRNAU1AP	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSSSCG00000030284	TRNAU1AP	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSSSCG00000030284	TRNAU1AP	98	58.199	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSSSCG00000030284	TRNAU1AP	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSSSCG00000030284	TRNAU1AP	99	75.874	ENSACAG00000003995	-	99	75.874	Anolis_carolinensis
ENSSSCG00000030284	TRNAU1AP	99	50.286	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSANAG00000018976	TRNAU1AP	100	100.000	Aotus_nancymaae
ENSSSCG00000030284	TRNAU1AP	98	59.000	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSSSCG00000030284	TRNAU1AP	95	65.556	ENSAMXG00000029240	-	98	65.556	Astyanax_mexicanus
ENSSSCG00000030284	TRNAU1AP	95	57.762	ENSAMXG00000013750	trnau1apa	90	57.762	Astyanax_mexicanus
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSBTAG00000010393	TRNAU1AP	100	99.652	Bos_taurus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSCJAG00000009717	TRNAU1AP	100	100.000	Callithrix_jacchus
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSCAFG00000011735	TRNAU1AP	100	99.652	Canis_familiaris
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSCAFG00020023584	TRNAU1AP	100	99.652	Canis_lupus_dingo
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSCHIG00000023215	TRNAU1AP	100	99.303	Capra_hircus
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSTSYG00000003506	TRNAU1AP	100	99.652	Carlito_syrichta
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSCPOG00000001925	TRNAU1AP	100	99.303	Cavia_porcellus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSCCAG00000037506	TRNAU1AP	100	100.000	Cebus_capucinus
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSCATG00000044617	TRNAU1AP	100	99.652	Cercocebus_atys
ENSSSCG00000030284	TRNAU1AP	100	98.606	ENSCLAG00000008223	TRNAU1AP	100	98.606	Chinchilla_lanigera
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSCSAG00000001014	TRNAU1AP	100	99.652	Chlorocebus_sabaeus
ENSSSCG00000030284	TRNAU1AP	100	94.350	ENSCPBG00000000121	TRNAU1AP	100	94.891	Chrysemys_picta_bellii
ENSSSCG00000030284	TRNAU1AP	99	35.096	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSCANG00000041949	TRNAU1AP	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSCGRG00001004713	Trnau1ap	100	99.303	Cricetulus_griseus_chok1gshd
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSCGRG00000014532	Trnau1ap	100	99.303	Cricetulus_griseus_crigri
ENSSSCG00000030284	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	95	56.954	Cynoglossus_semilaevis
ENSSSCG00000030284	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSSSCG00000030284	TRNAU1AP	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSSSCG00000030284	TRNAU1AP	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSDNOG00000033009	TRNAU1AP	100	99.652	Dasypus_novemcinctus
ENSSSCG00000030284	TRNAU1AP	99	91.608	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSSSCG00000030284	TRNAU1AP	96	38.344	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSSSCG00000030284	TRNAU1AP	100	92.655	ENSETEG00000012594	TRNAU1AP	100	94.694	Echinops_telfairi
ENSSSCG00000030284	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSEASG00005010062	TRNAU1AP	100	100.000	Equus_asinus_asinus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSECAG00000012980	TRNAU1AP	100	100.000	Equus_caballus
ENSSSCG00000030284	TRNAU1AP	96	70.526	ENSELUG00000022790	-	94	53.017	Esox_lucius
ENSSSCG00000030284	TRNAU1AP	96	63.066	ENSELUG00000017686	trnau1apa	94	62.718	Esox_lucius
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSFCAG00000013401	TRNAU1AP	100	100.000	Felis_catus
ENSSSCG00000030284	TRNAU1AP	100	92.090	ENSFALG00000001371	TRNAU1AP	100	93.796	Ficedula_albicollis
ENSSSCG00000030284	TRNAU1AP	100	98.606	ENSFDAG00000018599	TRNAU1AP	100	98.606	Fukomys_damarensis
ENSSSCG00000030284	TRNAU1AP	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSSSCG00000030284	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSSSCG00000030284	TRNAU1AP	100	93.380	ENSGALG00000001310	-	100	93.380	Gallus_gallus
ENSSSCG00000030284	TRNAU1AP	99	47.692	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSSSCG00000030284	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSSSCG00000030284	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSSSCG00000030284	TRNAU1AP	100	94.915	ENSGAGG00000004940	TRNAU1AP	100	95.255	Gopherus_agassizii
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSGGOG00000003511	TRNAU1AP	100	100.000	Gorilla_gorilla
ENSSSCG00000030284	TRNAU1AP	98	58.033	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSSSCG00000030284	TRNAU1AP	100	98.606	ENSHGLG00000010380	TRNAU1AP	100	98.606	Heterocephalus_glaber_female
ENSSSCG00000030284	TRNAU1AP	100	98.305	ENSHGLG00100012699	TRNAU1AP	100	96.167	Heterocephalus_glaber_male
ENSSSCG00000030284	TRNAU1AP	99	57.096	ENSHCOG00000014770	trnau1apa	97	55.195	Hippocampus_comes
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSSTOG00000000079	TRNAU1AP	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSJJAG00000010128	Trnau1ap	100	98.955	Jaculus_jaculus
ENSSSCG00000030284	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSSSCG00000030284	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSSSCG00000030284	TRNAU1AP	100	77.966	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSSSCG00000030284	TRNAU1AP	99	72.028	ENSLOCG00000004041	trnau1apa	99	70.979	Lepisosteus_oculatus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSLAFG00000007628	TRNAU1AP	100	99.652	Loxodonta_africana
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMFAG00000043751	TRNAU1AP	100	99.652	Macaca_fascicularis
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMMUG00000006561	TRNAU1AP	100	99.652	Macaca_mulatta
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMNEG00000044201	TRNAU1AP	100	99.652	Macaca_nemestrina
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMLEG00000015649	TRNAU1AP	100	99.652	Mandrillus_leucophaeus
ENSSSCG00000030284	TRNAU1AP	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSSSCG00000030284	TRNAU1AP	98	59.000	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSSSCG00000030284	TRNAU1AP	100	91.525	ENSMGAG00000002105	TRNAU1AP	100	93.165	Meleagris_gallopavo
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMICG00000008386	TRNAU1AP	100	99.652	Microcebus_murinus
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSMOCG00000011189	Trnau1ap	100	98.955	Microtus_ochrogaster
ENSSSCG00000030284	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	95	56.429	Mola_mola
ENSSSCG00000030284	TRNAU1AP	100	95.470	ENSMODG00000010927	TRNAU1AP	100	95.470	Monodelphis_domestica
ENSSSCG00000030284	TRNAU1AP	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSSSCG00000030284	TRNAU1AP	100	98.955	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSSSCG00000030284	TRNAU1AP	100	99.303	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSSSCG00000030284	TRNAU1AP	100	98.606	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSMPUG00000015511	TRNAU1AP	100	99.303	Mustela_putorius_furo
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSMLUG00000012586	TRNAU1AP	100	99.652	Myotis_lucifugus
ENSSSCG00000030284	TRNAU1AP	100	97.561	ENSNGAG00000015881	Trnau1ap	100	97.561	Nannospalax_galili
ENSSSCG00000030284	TRNAU1AP	99	56.997	ENSNBRG00000001758	trnau1apa	98	57.388	Neolamprologus_brichardi
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSNLEG00000009822	TRNAU1AP	100	100.000	Nomascus_leucogenys
ENSSSCG00000030284	TRNAU1AP	100	92.655	ENSMEUG00000006117	TRNAU1AP	100	94.245	Notamacropus_eugenii
ENSSSCG00000030284	TRNAU1AP	80	98.182	ENSOPRG00000007084	-	69	98.182	Ochotona_princeps
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSODEG00000002970	TRNAU1AP	100	98.955	Octodon_degus
ENSSSCG00000030284	TRNAU1AP	80	59.671	ENSONIG00000004715	trnau1apa	98	59.677	Oreochromis_niloticus
ENSSSCG00000030284	TRNAU1AP	98	78.286	ENSOANG00000005325	-	99	74.476	Ornithorhynchus_anatinus
ENSSSCG00000030284	TRNAU1AP	100	98.870	ENSOCUG00000011704	-	100	97.909	Oryctolagus_cuniculus
ENSSSCG00000030284	TRNAU1AP	89	77.344	ENSOCUG00000006834	-	100	75.391	Oryctolagus_cuniculus
ENSSSCG00000030284	TRNAU1AP	100	77.778	ENSOCUG00000002353	-	100	77.778	Oryctolagus_cuniculus
ENSSSCG00000030284	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSSSCG00000030284	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSSSCG00000030284	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSSSCG00000030284	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSOGAG00000002274	TRNAU1AP	100	99.652	Otolemur_garnettii
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSOARG00000002843	TRNAU1AP	100	99.303	Ovis_aries
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSPPAG00000033927	TRNAU1AP	100	100.000	Pan_paniscus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSPPRG00000004416	TRNAU1AP	100	100.000	Panthera_pardus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSPTIG00000016677	TRNAU1AP	100	100.000	Panthera_tigris_altaica
ENSSSCG00000030284	TRNAU1AP	100	74.444	ENSPTRG00000000434	-	97	79.705	Pan_troglodytes
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSPANG00000016019	TRNAU1AP	100	99.652	Papio_anubis
ENSSSCG00000030284	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSSSCG00000030284	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSSSCG00000030284	TRNAU1AP	100	94.350	ENSPSIG00000006864	TRNAU1AP	100	95.255	Pelodiscus_sinensis
ENSSSCG00000030284	TRNAU1AP	94	61.397	ENSPMGG00000023893	trnau1apa	93	59.206	Periophthalmus_magnuspinnatus
ENSSSCG00000030284	TRNAU1AP	100	98.955	ENSPEMG00000007877	Trnau1ap	100	98.955	Peromyscus_maniculatus_bairdii
ENSSSCG00000030284	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSSSCG00000030284	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	97	60.550	Petromyzon_marinus
ENSSSCG00000030284	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSSSCG00000030284	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSSSCG00000030284	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSSSCG00000030284	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	84	67.500	Poecilia_reticulata
ENSSSCG00000030284	TRNAU1AP	100	81.006	ENSPPYG00000001639	-	100	86.822	Pongo_abelii
ENSSSCG00000030284	TRNAU1AP	98	82.562	ENSPCOG00000023470	-	100	82.562	Propithecus_coquereli
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSPCOG00000027712	-	100	99.652	Propithecus_coquereli
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSPVAG00000017214	TRNAU1AP	100	100.000	Pteropus_vampyrus
ENSSSCG00000030284	TRNAU1AP	98	58.033	ENSPNYG00000010130	trnau1apa	81	77.778	Pundamilia_nyererei
ENSSSCG00000030284	TRNAU1AP	95	55.124	ENSPNAG00000024905	trnau1apa	91	54.317	Pygocentrus_nattereri
ENSSSCG00000030284	TRNAU1AP	94	90.775	ENSRNOG00000055344	Trnau1ap	92	90.775	Rattus_norvegicus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSRBIG00000029083	TRNAU1AP	100	100.000	Rhinopithecus_bieti
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSRROG00000029128	TRNAU1AP	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSSBOG00000021299	TRNAU1AP	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000030284	TRNAU1AP	100	94.774	ENSSHAG00000008108	TRNAU1AP	100	94.774	Sarcophilus_harrisii
ENSSSCG00000030284	TRNAU1AP	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSSSCG00000030284	TRNAU1AP	96	58.844	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSSSCG00000030284	TRNAU1AP	96	46.545	ENSSLDG00000012101	trnau1apa	92	50.538	Seriola_lalandi_dorsalis
ENSSSCG00000030284	TRNAU1AP	100	98.870	ENSSARG00000007536	TRNAU1AP	100	98.561	Sorex_araneus
ENSSSCG00000030284	TRNAU1AP	99	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSSSCG00000030284	TRNAU1AP	99	86.364	ENSSPUG00000010400	-	100	86.364	Sphenodon_punctatus
ENSSSCG00000030284	TRNAU1AP	98	58.689	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSSSCG00000030284	TRNAU1AP	100	92.655	ENSTGUG00000000735	-	100	94.245	Taeniopygia_guttata
ENSSSCG00000030284	TRNAU1AP	99	51.685	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSSSCG00000030284	TRNAU1AP	98	59.136	ENSTRUG00000003352	trnau1apa	98	58.472	Takifugu_rubripes
ENSSSCG00000030284	TRNAU1AP	98	57.096	ENSTNIG00000006129	trnau1apa	98	57.096	Tetraodon_nigroviridis
ENSSSCG00000030284	TRNAU1AP	100	93.785	ENSTBEG00000008049	-	100	88.163	Tupaia_belangeri
ENSSSCG00000030284	TRNAU1AP	100	99.652	ENSTTRG00000001854	TRNAU1AP	100	99.652	Tursiops_truncatus
ENSSSCG00000030284	TRNAU1AP	100	99.435	ENSUAMG00000008789	TRNAU1AP	100	99.635	Ursus_americanus
ENSSSCG00000030284	TRNAU1AP	100	99.303	ENSUMAG00000011068	TRNAU1AP	100	99.303	Ursus_maritimus
ENSSSCG00000030284	TRNAU1AP	100	100.000	ENSVPAG00000006778	TRNAU1AP	100	89.041	Vicugna_pacos
ENSSSCG00000030284	TRNAU1AP	100	99.435	ENSVVUG00000012518	TRNAU1AP	93	98.258	Vulpes_vulpes
ENSSSCG00000030284	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus