EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000030432 (Gene tree)
Gene ID: 100621746
Gene Symbol: -
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 2677 bases
Position: chr6:85603071-85605747
Accession: 100621746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025366	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031603	-	1541	XM_003356245	ENSSSCP00000025366	219 (aa)	XP_003356293	I3LMP5

Gene Model

Click here to download ENSSSCG00000030432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000030432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000030432	-	78	35.673	ENSSSCG00000037653	RAB5A	75	35.673
ENSSSCG00000030432	-	97	40.187	ENSSSCG00000008359	RAB1A	99	40.566
ENSSSCG00000030432	-	67	33.333	ENSSSCG00000032477	NRAS	86	31.214
ENSSSCG00000030432	-	79	38.728	ENSSSCG00000028655	RAB18	80	38.728
ENSSSCG00000030432	-	97	38.967	ENSSSCG00000029544	RAB2B	93	38.967
ENSSSCG00000030432	-	98	35.945	ENSSSCG00000013600	RAB11B	95	35.945
ENSSSCG00000030432	-	80	37.853	ENSSSCG00000038026	RAB12	69	37.853
ENSSSCG00000030432	-	80	32.967	ENSSSCG00000010048	RAB36	66	32.967
ENSSSCG00000030432	-	79	37.640	ENSSSCG00000032672	RAB9B	83	37.640
ENSSSCG00000030432	-	79	36.416	ENSSSCG00000002280	RAB15	77	36.416
ENSSSCG00000030432	-	67	33.333	ENSSSCG00000026969	KRAS	96	30.366
ENSSSCG00000030432	-	87	47.644	ENSSSCG00000024233	RAB39B	86	47.644
ENSSSCG00000030432	-	96	33.333	ENSSSCG00000032467	RAB5C	92	33.333
ENSSSCG00000030432	-	95	37.915	ENSSSCG00000006564	-	93	37.915
ENSSSCG00000030432	-	81	37.363	ENSSSCG00000012123	RAB9A	85	37.363
ENSSSCG00000030432	-	78	35.088	ENSSSCG00000007513	RAB22A	84	35.088
ENSSSCG00000030432	-	79	31.818	ENSSSCG00000011615	RAB7A	81	31.818
ENSSSCG00000030432	-	84	38.021	ENSSSCG00000036503	RAB6B	88	38.021
ENSSSCG00000030432	-	88	37.879	ENSSSCG00000005514	RAB14	86	37.879
ENSSSCG00000030432	-	54	36.975	ENSSSCG00000031513	HRAS	86	30.636
ENSSSCG00000030432	-	78	37.714	ENSSSCG00000020711	RAB33B	73	37.714
ENSSSCG00000030432	-	82	38.889	ENSSSCG00000033876	RAB35	93	37.755
ENSSSCG00000030432	-	96	33.953	ENSSSCG00000029539	RAB23	94	33.953
ENSSSCG00000030432	-	76	36.842	ENSSSCG00000012658	RAB33A	59	36.842
ENSSSCG00000030432	-	82	40.000	ENSSSCG00000032312	RAB11A	79	40.000
ENSSSCG00000030432	-	79	40.805	ENSSSCG00000039186	RAB25	77	40.805
ENSSSCG00000030432	-	96	36.019	ENSSSCG00000014828	RAB6A	94	36.019
ENSSSCG00000030432	-	83	43.716	ENSSSCG00000012954	RAB1B	93	43.716
ENSSSCG00000030432	-	89	39.175	ENSSSCG00000006232	RAB2A	94	37.441
ENSSSCG00000030432	-	84	39.362	ENSSSCG00000014900	RAB30	88	39.362
ENSSSCG00000030432	-	80	33.520	ENSSSCG00000016434	RHEB	92	33.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000030432	-	100	85.909	ENSANAG00000035487	-	100	85.909	Aotus_nancymaae
ENSSSCG00000030432	-	100	85.455	ENSBTAG00000021525	-	100	85.455	Bos_taurus
ENSSSCG00000030432	-	99	59.174	ENSCPBG00000011245	RAB42	99	60.190	Chrysemys_picta_bellii
ENSSSCG00000030432	-	100	76.471	ENSCGRG00001019426	Rab42	100	76.471	Cricetulus_griseus_chok1gshd
ENSSSCG00000030432	-	100	76.818	ENSDORG00000023607	Rab42	100	76.818	Dipodomys_ordii
ENSSSCG00000030432	-	100	83.182	ENSFCAG00000037124	-	100	84.091	Felis_catus
ENSSSCG00000030432	-	97	58.879	ENSGAGG00000004921	RAB42	99	58.962	Gopherus_agassizii
ENSSSCG00000030432	-	100	82.727	ENSSTOG00000000084	-	100	82.727	Ictidomys_tridecemlineatus
ENSSSCG00000030432	-	100	76.923	ENSMAUG00000020223	Rab42	100	76.923	Mesocricetus_auratus
ENSSSCG00000030432	-	100	85.455	ENSMICG00000029915	-	100	86.364	Microcebus_murinus
ENSSSCG00000030432	-	100	78.636	ENSMOCG00000021639	Rab42	100	78.636	Microtus_ochrogaster
ENSSSCG00000030432	-	97	63.551	ENSMODG00000023873	-	95	63.551	Monodelphis_domestica
ENSSSCG00000030432	-	100	79.545	ENSNGAG00000015676	Rab42	100	79.545	Nannospalax_galili
ENSSSCG00000030432	-	100	85.455	ENSOGAG00000006951	-	100	86.364	Otolemur_garnettii
ENSSSCG00000030432	-	99	59.908	ENSPSIG00000006831	RAB42	94	59.908	Pelodiscus_sinensis
ENSSSCG00000030432	-	100	85.909	ENSPCOG00000008605	-	100	86.818	Propithecus_coquereli
ENSSSCG00000030432	-	96	82.464	ENSSARG00000007565	-	100	82.464	Sorex_araneus
ENSSSCG00000030432	-	98	59.174	ENSSPUG00000010337	RAB42	98	59.174	Sphenodon_punctatus