EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000030728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chrX:23259656-23259811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000056874	Ribosomal_L39	PF00832.20	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000034961	-	129	-	ENSSSCP00000056874	42 (aa)	-	A0A287BLC5

Gene Model

Click here to download ENSSSCG00000030728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000030728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000030728	-	98	63.265	ENSSSCG00000030928	-	100	63.265
ENSSSCG00000030728	-	100	72.549	ENSSSCG00000040703	-	100	72.549
ENSSSCG00000030728	-	100	72.549	ENSSSCG00000038467	-	100	72.549
ENSSSCG00000030728	-	86	83.333	ENSSSCG00000033224	-	71	83.333
ENSSSCG00000030728	-	100	72.549	ENSSSCG00000030849	-	100	72.549
ENSSSCG00000030728	-	100	67.308	ENSSSCG00000033110	-	100	67.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000030728	-	100	66.667	ENSANAG00000033598	-	95	66.667	Aotus_nancymaae
ENSSSCG00000030728	-	100	88.095	ENSANAG00000032459	-	81	88.095	Aotus_nancymaae
ENSSSCG00000030728	-	67	82.143	ENSCSEG00000007995	-	74	82.143	Cynoglossus_semilaevis
ENSSSCG00000030728	-	100	69.048	ENSFCAG00000044060	-	88	69.048	Felis_catus
ENSSSCG00000030728	-	83	88.571	ENSMAUG00000010952	-	100	88.571	Mesocricetus_auratus
ENSSSCG00000030728	-	90	81.579	ENSPPRG00000016675	-	68	81.579	Panthera_pardus
ENSSSCG00000030728	-	90	81.579	ENSPTIG00000006415	-	68	81.579	Panthera_tigris_altaica
ENSSSCG00000030728	-	83	88.571	ENSPNYG00000009831	-	100	88.571	Pundamilia_nyererei
ENSSSCG00000030728	-	64	77.778	ENSSLDG00000009401	-	69	77.778	Seriola_lalandi_dorsalis
ENSSSCG00000030728	-	86	69.444	ENSSARG00000001310	-	70	69.444	Sorex_araneus
ENSSSCG00000030728	-	100	70.588	ENSSPUG00000013103	-	100	70.588	Sphenodon_punctatus
ENSSSCG00000030728	-	86	75.000	ENSUAMG00000021041	-	73	75.000	Ursus_americanus
ENSSSCG00000030728	-	86	75.000	ENSUMAG00000022604	-	73	75.000	Ursus_maritimus
ENSSSCG00000030728	-	81	88.235	ENSVPAG00000009970	-	100	88.235	Vicugna_pacos