EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000031397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3860 bases
Position: chr5:20977160-20981019
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000056611	RNA_pol_Rpb4	PF03874.16	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042624	-	345	-	ENSSSCP00000056611	114 (aa)	-	A0A287BKC4

Gene Model

Click here to download ENSSSCG00000031397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000031397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000031397	-	100	93.860	ENSSSCG00000034001	-	100	93.860
ENSSSCG00000031397	-	78	94.382	ENSSSCG00000039653	-	91	94.382
ENSSSCG00000031397	-	98	72.519	ENSSSCG00000032119	-	88	72.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000031397	-	74	76.238	ENSG00000241258	CRCP	88	69.466	Homo_sapiens
ENSSSCG00000031397	-	74	68.317	ENSAPOG00000016572	crcp	72	69.811	Acanthochromis_polyacanthus
ENSSSCG00000031397	-	96	70.312	ENSAMEG00000015954	CRCP	88	70.312	Ailuropoda_melanoleuca
ENSSSCG00000031397	-	68	64.211	ENSACIG00000020248	crcp	82	58.537	Amphilophus_citrinellus
ENSSSCG00000031397	-	74	68.317	ENSAOCG00000021389	crcp	72	69.811	Amphiprion_ocellaris
ENSSSCG00000031397	-	56	61.728	ENSAPEG00000016688	crcp	59	61.728	Amphiprion_percula
ENSSSCG00000031397	-	74	66.337	ENSATEG00000008670	crcp	88	60.465	Anabas_testudineus
ENSSSCG00000031397	-	98	70.229	ENSANAG00000032466	CRCP	88	70.229	Aotus_nancymaae
ENSSSCG00000031397	-	74	67.327	ENSACLG00000007588	crcp	88	61.240	Astatotilapia_calliptera
ENSSSCG00000031397	-	75	64.078	ENSAMXG00000043940	crcp	71	64.078	Astyanax_mexicanus
ENSSSCG00000031397	-	98	68.702	ENSBTAG00000049986	-	88	68.702	Bos_taurus
ENSSSCG00000031397	-	98	69.466	ENSBTAG00000037489	CRCP	88	69.466	Bos_taurus
ENSSSCG00000031397	-	78	37.143	WBGene00044924	M106.7	80	37.143	Caenorhabditis_elegans
ENSSSCG00000031397	-	98	69.466	ENSCJAG00000004225	CRCP	88	69.466	Callithrix_jacchus
ENSSSCG00000031397	-	98	70.229	ENSCAFG00000010756	CRCP	88	70.229	Canis_familiaris
ENSSSCG00000031397	-	98	70.229	ENSCAFG00020005322	CRCP	88	70.229	Canis_lupus_dingo
ENSSSCG00000031397	-	68	70.833	ENSCHIG00000015299	CRCP	80	64.567	Capra_hircus
ENSSSCG00000031397	-	98	69.466	ENSTSYG00000005933	CRCP	88	69.466	Carlito_syrichta
ENSSSCG00000031397	-	74	60.714	ENSCATG00000036957	CRCP	84	57.018	Cercocebus_atys
ENSSSCG00000031397	-	98	66.412	ENSCLAG00000007249	CRCP	88	66.412	Chinchilla_lanigera
ENSSSCG00000031397	-	85	67.241	ENSCSAG00000018288	CRCP	65	67.241	Chlorocebus_sabaeus
ENSSSCG00000031397	-	74	70.297	ENSCPBG00000014854	CRCP	72	71.698	Chrysemys_picta_bellii
ENSSSCG00000031397	-	61	40.230	ENSCING00000003588	cgrp-rcp	73	43.478	Ciona_intestinalis
ENSSSCG00000031397	-	98	70.229	ENSCANG00000038796	CRCP	88	70.229	Colobus_angolensis_palliatus
ENSSSCG00000031397	-	74	73.267	ENSCGRG00001009376	Crcp	87	67.692	Cricetulus_griseus_chok1gshd
ENSSSCG00000031397	-	74	72.277	ENSCGRG00000003194	Crcp	87	66.923	Cricetulus_griseus_crigri
ENSSSCG00000031397	-	71	61.224	ENSCSEG00000018814	crcp	70	63.107	Cynoglossus_semilaevis
ENSSSCG00000031397	-	74	60.396	ENSCVAG00000013625	crcp	72	62.264	Cyprinodon_variegatus
ENSSSCG00000031397	-	74	66.337	ENSDARG00000069373	crcp	90	60.000	Danio_rerio
ENSSSCG00000031397	-	98	70.992	ENSDNOG00000002751	CRCP	88	70.992	Dasypus_novemcinctus
ENSSSCG00000031397	-	71	75.510	ENSDORG00000013712	Crcp	88	68.750	Dipodomys_ordii
ENSSSCG00000031397	-	98	70.992	ENSEASG00005008835	CRCP	88	70.992	Equus_asinus_asinus
ENSSSCG00000031397	-	71	77.551	ENSECAG00000011060	CRCP	86	70.312	Equus_caballus
ENSSSCG00000031397	-	60	67.059	ENSEEUG00000005796	-	87	61.739	Erinaceus_europaeus
ENSSSCG00000031397	-	74	66.337	ENSELUG00000019916	crcp	87	60.465	Esox_lucius
ENSSSCG00000031397	-	98	70.229	ENSFCAG00000022099	CRCP	88	70.229	Felis_catus
ENSSSCG00000031397	-	74	70.297	ENSFALG00000006720	CRCP	91	64.341	Ficedula_albicollis
ENSSSCG00000031397	-	74	75.248	ENSFDAG00000014337	CRCP	71	75.472	Fukomys_damarensis
ENSSSCG00000031397	-	74	64.356	ENSFHEG00000021283	crcp	72	66.038	Fundulus_heteroclitus
ENSSSCG00000031397	-	71	67.347	ENSGMOG00000011351	crcp	90	61.111	Gadus_morhua
ENSSSCG00000031397	-	96	61.905	ENSGALG00000002587	CRCP	89	63.566	Gallus_gallus
ENSSSCG00000031397	-	74	64.356	ENSGAFG00000002307	crcp	72	66.038	Gambusia_affinis
ENSSSCG00000031397	-	74	68.317	ENSGACG00000020468	crcp	74	69.811	Gasterosteus_aculeatus
ENSSSCG00000031397	-	74	70.297	ENSGAGG00000011445	CRCP	84	62.500	Gopherus_agassizii
ENSSSCG00000031397	-	74	76.238	ENSGGOG00000039733	CRCP	88	69.466	Gorilla_gorilla
ENSSSCG00000031397	-	74	68.317	ENSHBUG00000004779	crcp	88	62.016	Haplochromis_burtoni
ENSSSCG00000031397	-	74	73.267	ENSHGLG00000011719	CRCP	88	64.122	Heterocephalus_glaber_female
ENSSSCG00000031397	-	75	70.588	ENSHGLG00100005071	CRCP	69	70.588	Heterocephalus_glaber_male
ENSSSCG00000031397	-	71	62.245	ENSHCOG00000009105	crcp	73	64.078	Hippocampus_comes
ENSSSCG00000031397	-	74	65.347	ENSIPUG00000024520	CRCP	88	59.690	Ictalurus_punctatus
ENSSSCG00000031397	-	61	74.419	ENSSTOG00000008885	CRCP	86	66.379	Ictidomys_tridecemlineatus
ENSSSCG00000031397	-	74	77.228	ENSJJAG00000016893	Crcp	88	69.466	Jaculus_jaculus
ENSSSCG00000031397	-	74	64.356	ENSKMAG00000007300	crcp	88	58.915	Kryptolebias_marmoratus
ENSSSCG00000031397	-	78	66.038	ENSLBEG00000000804	crcp	74	66.038	Labrus_bergylta
ENSSSCG00000031397	-	71	68.367	ENSLOCG00000005302	crcp	86	61.905	Lepisosteus_oculatus
ENSSSCG00000031397	-	71	77.551	ENSLAFG00000027377	CRCP	88	70.312	Loxodonta_africana
ENSSSCG00000031397	-	98	69.466	ENSMFAG00000037828	CRCP	88	69.466	Macaca_fascicularis
ENSSSCG00000031397	-	98	69.466	ENSMMUG00000014524	CRCP	88	69.466	Macaca_mulatta
ENSSSCG00000031397	-	72	64.646	ENSMNEG00000030945	CRCP	97	64.646	Macaca_nemestrina
ENSSSCG00000031397	-	98	69.466	ENSMLEG00000043904	CRCP	88	69.466	Mandrillus_leucophaeus
ENSSSCG00000031397	-	74	67.327	ENSMAMG00000021168	crcp	73	68.868	Mastacembelus_armatus
ENSSSCG00000031397	-	74	67.327	ENSMZEG00005025255	crcp	88	61.240	Maylandia_zebra
ENSSSCG00000031397	-	73	69.000	ENSMGAG00000004593	CRCP	88	62.500	Meleagris_gallopavo
ENSSSCG00000031397	-	59	69.048	ENSMAUG00000018383	Crcp	100	69.048	Mesocricetus_auratus
ENSSSCG00000031397	-	98	70.992	ENSMICG00000004191	CRCP	88	70.992	Microcebus_murinus
ENSSSCG00000031397	-	71	71.429	ENSMOCG00000002717	Crcp	85	66.142	Microtus_ochrogaster
ENSSSCG00000031397	-	71	66.327	ENSMMOG00000011491	crcp	65	67.961	Mola_mola
ENSSSCG00000031397	-	87	64.062	ENSMODG00000028983	-	53	64.062	Monodelphis_domestica
ENSSSCG00000031397	-	71	63.265	ENSMALG00000020309	crcp	71	65.049	Monopterus_albus
ENSSSCG00000031397	-	74	73.267	MGP_CAROLIEiJ_G0027795	Crcp	87	67.692	Mus_caroli
ENSSSCG00000031397	-	74	73.267	ENSMUSG00000025532	Crcp	87	67.692	Mus_musculus
ENSSSCG00000031397	-	74	73.267	MGP_PahariEiJ_G0024389	Crcp	87	67.692	Mus_pahari
ENSSSCG00000031397	-	74	72.277	MGP_SPRETEiJ_G0028793	Crcp	87	66.923	Mus_spretus
ENSSSCG00000031397	-	96	69.767	ENSMPUG00000016198	CRCP	88	69.767	Mustela_putorius_furo
ENSSSCG00000031397	-	96	69.531	ENSMLUG00000012217	CRCP	88	69.531	Myotis_lucifugus
ENSSSCG00000031397	-	74	77.228	ENSNGAG00000021687	Crcp	87	70.769	Nannospalax_galili
ENSSSCG00000031397	-	61	67.816	ENSNBRG00000003094	crcp	57	60.870	Neolamprologus_brichardi
ENSSSCG00000031397	-	96	69.531	ENSNLEG00000001437	CRCP	86	69.531	Nomascus_leucogenys
ENSSSCG00000031397	-	74	75.248	ENSODEG00000020033	-	89	65.649	Octodon_degus
ENSSSCG00000031397	-	70	57.778	ENSODEG00000003432	-	90	51.613	Octodon_degus
ENSSSCG00000031397	-	71	75.510	ENSODEG00000014255	-	88	65.625	Octodon_degus
ENSSSCG00000031397	-	74	56.311	ENSONIG00000008677	crcp	88	52.672	Oreochromis_niloticus
ENSSSCG00000031397	-	73	71.287	ENSOANG00000009026	-	74	71.287	Ornithorhynchus_anatinus
ENSSSCG00000031397	-	98	68.702	ENSOCUG00000014827	CRCP	88	68.702	Oryctolagus_cuniculus
ENSSSCG00000031397	-	74	63.366	ENSORLG00000028784	crcp	88	58.140	Oryzias_latipes
ENSSSCG00000031397	-	74	63.366	ENSORLG00020017373	crcp	72	65.094	Oryzias_latipes_hni
ENSSSCG00000031397	-	74	62.376	ENSORLG00015001859	crcp	88	57.364	Oryzias_latipes_hsok
ENSSSCG00000031397	-	74	62.376	ENSOMEG00000008006	crcp	88	57.364	Oryzias_melastigma
ENSSSCG00000031397	-	96	60.630	ENSOGAG00000001914	CRCP	87	60.630	Otolemur_garnettii
ENSSSCG00000031397	-	74	76.238	ENSPPAG00000030427	CRCP	88	69.466	Pan_paniscus
ENSSSCG00000031397	-	98	70.229	ENSPPRG00000012841	CRCP	88	70.229	Panthera_pardus
ENSSSCG00000031397	-	96	65.385	ENSPTIG00000009335	CRCP	88	65.385	Panthera_tigris_altaica
ENSSSCG00000031397	-	96	68.750	ENSPTRG00000019246	-	86	68.750	Pan_troglodytes
ENSSSCG00000031397	-	74	76.238	ENSPTRG00000046581	CRCP	88	69.466	Pan_troglodytes
ENSSSCG00000031397	-	98	69.466	ENSPANG00000023118	CRCP	88	69.466	Papio_anubis
ENSSSCG00000031397	-	74	69.307	ENSPKIG00000011467	crcp	72	70.755	Paramormyrops_kingsleyae
ENSSSCG00000031397	-	71	66.327	ENSPSIG00000008385	CRCP	84	60.317	Pelodiscus_sinensis
ENSSSCG00000031397	-	71	66.327	ENSPMGG00000005986	crcp	70	67.961	Periophthalmus_magnuspinnatus
ENSSSCG00000031397	-	74	73.267	ENSPEMG00000010829	Crcp	87	67.692	Peromyscus_maniculatus_bairdii
ENSSSCG00000031397	-	74	64.356	ENSPFOG00000008626	crcp	72	66.038	Poecilia_formosa
ENSSSCG00000031397	-	74	64.356	ENSPLAG00000005996	crcp	72	66.038	Poecilia_latipinna
ENSSSCG00000031397	-	74	64.356	ENSPMEG00000020035	crcp	72	66.038	Poecilia_mexicana
ENSSSCG00000031397	-	78	61.321	ENSPREG00000008487	crcp	79	61.321	Poecilia_reticulata
ENSSSCG00000031397	-	98	69.466	ENSPPYG00000017525	CRCP	88	69.466	Pongo_abelii
ENSSSCG00000031397	-	74	68.317	ENSPNYG00000016988	crcp	88	62.016	Pundamilia_nyererei
ENSSSCG00000031397	-	74	67.327	ENSPNAG00000004712	crcp	91	60.606	Pygocentrus_nattereri
ENSSSCG00000031397	-	73	72.000	ENSRNOG00000000901	Crcp	87	66.667	Rattus_norvegicus
ENSSSCG00000031397	-	96	69.531	ENSRBIG00000039256	CRCP	86	69.531	Rhinopithecus_bieti
ENSSSCG00000031397	-	96	69.531	ENSRROG00000037982	CRCP	86	69.531	Rhinopithecus_roxellana
ENSSSCG00000031397	-	74	73.267	ENSSBOG00000011617	-	88	67.176	Saimiri_boliviensis_boliviensis
ENSSSCG00000031397	-	96	69.531	ENSSBOG00000025998	-	88	69.531	Saimiri_boliviensis_boliviensis
ENSSSCG00000031397	-	71	72.449	ENSSHAG00000007315	CRCP	88	65.354	Sarcophilus_harrisii
ENSSSCG00000031397	-	78	69.811	ENSSFOG00015013799	crcp	71	69.811	Scleropages_formosus
ENSSSCG00000031397	-	74	66.337	ENSSMAG00000019004	crcp	88	60.465	Scophthalmus_maximus
ENSSSCG00000031397	-	74	68.317	ENSSDUG00000019628	crcp	69	69.811	Seriola_dumerili
ENSSSCG00000031397	-	74	68.317	ENSSLDG00000016367	crcp	72	69.811	Seriola_lalandi_dorsalis
ENSSSCG00000031397	-	97	62.791	ENSSPUG00000002367	CRCP	88	62.791	Sphenodon_punctatus
ENSSSCG00000031397	-	74	68.317	ENSSPAG00000010443	crcp	72	69.811	Stegastes_partitus
ENSSSCG00000031397	-	69	68.750	ENSTGUG00000005354	CRCP	100	68.750	Taeniopygia_guttata
ENSSSCG00000031397	-	74	65.347	ENSTRUG00000025161	crcp	72	66.981	Takifugu_rubripes
ENSSSCG00000031397	-	74	63.107	ENSTNIG00000016137	crcp	72	64.815	Tetraodon_nigroviridis
ENSSSCG00000031397	-	98	67.176	ENSTTRG00000002888	CRCP	88	67.176	Tursiops_truncatus
ENSSSCG00000031397	-	98	70.229	ENSUMAG00000015406	CRCP	88	70.229	Ursus_maritimus
ENSSSCG00000031397	-	96	69.531	ENSVPAG00000006107	CRCP	88	69.531	Vicugna_pacos
ENSSSCG00000031397	-	98	70.229	ENSVVUG00000016521	CRCP	88	70.229	Vulpes_vulpes
ENSSSCG00000031397	-	71	65.306	ENSXETG00000025028	crcp	88	59.055	Xenopus_tropicalis
ENSSSCG00000031397	-	61	62.791	ENSXCOG00000007013	crcp	58	64.835	Xiphophorus_couchianus
ENSSSCG00000031397	-	74	64.356	ENSXMAG00000022222	crcp	72	66.038	Xiphophorus_maculatus