EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000031855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: CUGBP Elav-like family member 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 19052 bases
Position: chrAEMK02000574.1:21398-40449
Accession: 110258135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000053522	RRM_1	PF00076.22	1.6e-18	1	1
ENSSSCP00000059459	RRM_1	PF00076.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000048445	-	4337	XM_021081295	ENSSSCP00000053522	177 (aa)	XP_020936954	A0A287BSG4
ENSSSCT00000037140	-	3830	-	ENSSSCP00000059459	177 (aa)	-	A0A287BSG4

Gene Model

Click here to download ENSSSCG00000031855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000031855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000031855	-	60	41.026	ENSSSCG00000013617	ELAVL3	69	40.217
ENSSSCG00000031855	-	71	34.146	ENSSSCG00000005130	ELAVL2	72	34.615
ENSSSCG00000031855	-	71	32.990	ENSSSCG00000037291	ELAVL4	73	33.696
ENSSSCG00000031855	-	64	43.210	ENSSSCG00000013592	ELAVL1	71	43.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000031855	-	100	95.480	ENSDARG00000002131	celf2	87	93.370	Danio_rerio
ENSSSCG00000031855	-	74	91.603	ENSKMAG00000004040	celf2	88	75.287	Kryptolebias_marmoratus
ENSSSCG00000031855	-	73	95.349	ENSLBEG00000005593	-	100	95.349	Labrus_bergylta
ENSSSCG00000031855	-	51	90.000	ENSPMAG00000008007	-	100	90.000	Petromyzon_marinus
ENSSSCG00000031855	-	100	94.118	ENSPCIG00000003025	CELF2	60	94.118	Phascolarctos_cinereus
ENSSSCG00000031855	-	53	94.624	ENSPNYG00000023850	-	82	94.624	Pundamilia_nyererei
ENSSSCG00000031855	-	100	96.175	ENSUAMG00000008810	CELF2	61	96.175	Ursus_americanus