EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000031882 (Gene tree)
Gene ID: 100642182
Gene Symbol: PNPT1
Alias: DFNB70|OLD35|PNPase|old-35
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 44356 bases
Position: chr3:85595305-85639660
Accession: 100642182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000045253	KH_1	PF00013.29	8.2e-08	1	1
ENSSSCP00000045253	RNase_PH	PF01138.21	2.5e-40	1	2
ENSSSCP00000045253	RNase_PH	PF01138.21	2.5e-40	2	2
ENSSSCP00000045253	PNPase	PF03726.14	6.8e-08	1	1
ENSSSCP00000045253	S1	PF00575.23	4.9e-05	1	1
ENSSSCP00000045253	RNase_PH_C	PF03725.15	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055752	PNPT1-201	5079	XM_021085800	ENSSSCP00000045253	784 (aa)	XP_020941459	A0A287AMV5

Gene Model

Click here to download ENSSSCG00000031882's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000031882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000031882	PNPT1	99	92.839	ENSG00000138035	PNPT1	99	92.885	Homo_sapiens
ENSSSCG00000031882	PNPT1	94	77.584	ENSAPOG00000005581	PNPT1	98	77.497	Acanthochromis_polyacanthus
ENSSSCG00000031882	PNPT1	99	93.798	ENSAMEG00000003772	PNPT1	99	93.798	Ailuropoda_melanoleuca
ENSSSCG00000031882	PNPT1	92	77.793	ENSACIG00000010140	PNPT1	98	78.431	Amphilophus_citrinellus
ENSSSCG00000031882	PNPT1	96	77.034	ENSAOCG00000020109	PNPT1	98	77.763	Amphiprion_ocellaris
ENSSSCG00000031882	PNPT1	95	75.802	ENSAPEG00000002299	PNPT1	97	76.526	Amphiprion_percula
ENSSSCG00000031882	PNPT1	93	79.891	ENSATEG00000011164	PNPT1	95	79.973	Anabas_testudineus
ENSSSCG00000031882	PNPT1	93	82.585	ENSAPLG00000002885	PNPT1	99	83.034	Anas_platyrhynchos
ENSSSCG00000031882	PNPT1	99	79.975	ENSACAG00000003692	PNPT1	98	80.720	Anolis_carolinensis
ENSSSCG00000031882	PNPT1	99	92.645	ENSANAG00000023709	PNPT1	99	92.755	Aotus_nancymaae
ENSSSCG00000031882	PNPT1	96	76.772	ENSACLG00000024267	PNPT1	98	77.364	Astatotilapia_calliptera
ENSSSCG00000031882	PNPT1	91	78.039	ENSAMXG00000042321	PNPT1	99	78.255	Astyanax_mexicanus
ENSSSCG00000031882	PNPT1	99	95.343	ENSBTAG00000008909	PNPT1	99	95.343	Bos_taurus
ENSSSCG00000031882	PNPT1	92	41.826	WBGene00015266	BE0003N10.1	97	41.826	Caenorhabditis_elegans
ENSSSCG00000031882	PNPT1	99	92.645	ENSCJAG00000009740	PNPT1	99	92.885	Callithrix_jacchus
ENSSSCG00000031882	PNPT1	99	88.462	ENSCAFG00000002891	PNPT1	99	88.462	Canis_familiaris
ENSSSCG00000031882	PNPT1	100	94.133	ENSCAFG00020026841	PNPT1	99	94.179	Canis_lupus_dingo
ENSSSCG00000031882	PNPT1	99	91.850	ENSCHIG00000025034	PNPT1	99	91.850	Capra_hircus
ENSSSCG00000031882	PNPT1	99	91.979	ENSTSYG00000006536	PNPT1	99	91.979	Carlito_syrichta
ENSSSCG00000031882	PNPT1	91	71.468	ENSCAPG00000013300	PNPT1	98	71.667	Cavia_aperea
ENSSSCG00000031882	PNPT1	99	90.194	ENSCPOG00000011008	PNPT1	99	90.427	Cavia_porcellus
ENSSSCG00000031882	PNPT1	99	91.871	ENSCCAG00000037909	PNPT1	99	91.979	Cebus_capucinus
ENSSSCG00000031882	PNPT1	99	69.806	ENSCATG00000036442	-	98	69.780	Cercocebus_atys
ENSSSCG00000031882	PNPT1	99	91.816	ENSCATG00000031551	PNPT1	99	91.850	Cercocebus_atys
ENSSSCG00000031882	PNPT1	99	90.710	ENSCLAG00000006240	PNPT1	99	90.815	Chinchilla_lanigera
ENSSSCG00000031882	PNPT1	99	92.976	ENSCSAG00000014324	PNPT1	99	93.023	Chlorocebus_sabaeus
ENSSSCG00000031882	PNPT1	92	80.999	ENSCHOG00000007360	PNPT1	98	81.224	Choloepus_hoffmanni
ENSSSCG00000031882	PNPT1	99	81.658	ENSCPBG00000020856	PNPT1	99	82.061	Chrysemys_picta_bellii
ENSSSCG00000031882	PNPT1	99	93.095	ENSCANG00000034019	PNPT1	99	93.144	Colobus_angolensis_palliatus
ENSSSCG00000031882	PNPT1	99	72.610	ENSCANG00000028159	-	98	72.608	Colobus_angolensis_palliatus
ENSSSCG00000031882	PNPT1	99	90.141	ENSCGRG00001012245	Pnpt1	99	90.244	Cricetulus_griseus_chok1gshd
ENSSSCG00000031882	PNPT1	99	90.710	ENSCGRG00000007624	Pnpt1	99	90.815	Cricetulus_griseus_crigri
ENSSSCG00000031882	PNPT1	91	75.596	ENSCSEG00000000809	PNPT1	99	75.668	Cynoglossus_semilaevis
ENSSSCG00000031882	PNPT1	78	79.443	ENSCVAG00000010037	PNPT1	96	81.159	Cyprinodon_variegatus
ENSSSCG00000031882	PNPT1	99	91.591	ENSDNOG00000046753	PNPT1	99	91.591	Dasypus_novemcinctus
ENSSSCG00000031882	PNPT1	99	92.109	ENSDORG00000011409	Pnpt1	98	92.109	Dipodomys_ordii
ENSSSCG00000031882	PNPT1	92	57.945	FBgn0039846	PNPase	95	57.945	Drosophila_melanogaster
ENSSSCG00000031882	PNPT1	99	66.495	ENSETEG00000001582	-	99	66.667	Echinops_telfairi
ENSSSCG00000031882	PNPT1	91	54.646	ENSEBUG00000010305	PNPT1	94	54.646	Eptatretus_burgeri
ENSSSCG00000031882	PNPT1	99	94.825	ENSEASG00005001974	PNPT1	99	94.825	Equus_asinus_asinus
ENSSSCG00000031882	PNPT1	99	94.825	ENSECAG00000020058	PNPT1	97	94.825	Equus_caballus
ENSSSCG00000031882	PNPT1	99	82.732	ENSEEUG00000015610	PNPT1	99	82.732	Erinaceus_europaeus
ENSSSCG00000031882	PNPT1	96	77.398	ENSELUG00000004795	PNPT1	97	78.133	Esox_lucius
ENSSSCG00000031882	PNPT1	99	94.696	ENSFCAG00000013236	PNPT1	99	94.696	Felis_catus
ENSSSCG00000031882	PNPT1	93	82.256	ENSFALG00000011214	PNPT1	98	82.985	Ficedula_albicollis
ENSSSCG00000031882	PNPT1	99	89.898	ENSFDAG00000017446	PNPT1	99	89.909	Fukomys_damarensis
ENSSSCG00000031882	PNPT1	97	76.340	ENSFHEG00000006495	PNPT1	98	78.750	Fundulus_heteroclitus
ENSSSCG00000031882	PNPT1	96	74.474	ENSGMOG00000006805	PNPT1	98	74.934	Gadus_morhua
ENSSSCG00000031882	PNPT1	97	80.052	ENSGALG00000043545	PNPT1	94	80.718	Gallus_gallus
ENSSSCG00000031882	PNPT1	97	75.619	ENSGAFG00000019681	PNPT1	98	77.424	Gambusia_affinis
ENSSSCG00000031882	PNPT1	95	75.564	ENSGACG00000010840	PNPT1	98	75.564	Gasterosteus_aculeatus
ENSSSCG00000031882	PNPT1	99	77.806	ENSGGOG00000041496	-	98	78.068	Gorilla_gorilla
ENSSSCG00000031882	PNPT1	99	93.095	ENSGGOG00000006867	PNPT1	99	93.144	Gorilla_gorilla
ENSSSCG00000031882	PNPT1	96	76.610	ENSHBUG00000013041	PNPT1	97	77.200	Haplochromis_burtoni
ENSSSCG00000031882	PNPT1	89	82.521	ENSHGLG00000010054	-	95	82.521	Heterocephalus_glaber_female
ENSSSCG00000031882	PNPT1	99	90.944	ENSHGLG00000007480	PNPT1	99	90.944	Heterocephalus_glaber_female
ENSSSCG00000031882	PNPT1	99	78.008	ENSHGLG00100007397	-	98	78.008	Heterocephalus_glaber_male
ENSSSCG00000031882	PNPT1	99	90.944	ENSHGLG00100010920	PNPT1	99	90.944	Heterocephalus_glaber_male
ENSSSCG00000031882	PNPT1	93	64.099	ENSHCOG00000002817	PNPT1	98	64.276	Hippocampus_comes
ENSSSCG00000031882	PNPT1	93	77.428	ENSIPUG00000014624	PNPT1	99	78.086	Ictalurus_punctatus
ENSSSCG00000031882	PNPT1	100	91.582	ENSSTOG00000006304	PNPT1	99	91.721	Ictidomys_tridecemlineatus
ENSSSCG00000031882	PNPT1	99	91.355	ENSJJAG00000019227	Pnpt1	99	91.591	Jaculus_jaculus
ENSSSCG00000031882	PNPT1	98	75.974	ENSKMAG00000017389	PNPT1	98	76.943	Kryptolebias_marmoratus
ENSSSCG00000031882	PNPT1	94	77.598	ENSLBEG00000027692	PNPT1	97	77.254	Labrus_bergylta
ENSSSCG00000031882	PNPT1	90	80.731	ENSLACG00000011059	PNPT1	99	82.225	Latimeria_chalumnae
ENSSSCG00000031882	PNPT1	95	78.104	ENSLOCG00000015375	PNPT1	93	78.755	Lepisosteus_oculatus
ENSSSCG00000031882	PNPT1	99	84.190	ENSLAFG00000021462	PNPT1	99	84.407	Loxodonta_africana
ENSSSCG00000031882	PNPT1	99	93.095	ENSMFAG00000001927	PNPT1	99	93.144	Macaca_fascicularis
ENSSSCG00000031882	PNPT1	79	96.569	ENSMMUG00000007003	PNPT1	98	96.923	Macaca_mulatta
ENSSSCG00000031882	PNPT1	94	93.369	ENSMNEG00000038589	PNPT1	99	94.437	Macaca_nemestrina
ENSSSCG00000031882	PNPT1	99	68.159	ENSMLEG00000028524	-	98	68.564	Mandrillus_leucophaeus
ENSSSCG00000031882	PNPT1	99	89.898	ENSMLEG00000038706	PNPT1	99	89.909	Mandrillus_leucophaeus
ENSSSCG00000031882	PNPT1	99	70.611	ENSMAMG00000021954	PNPT1	99	71.080	Mastacembelus_armatus
ENSSSCG00000031882	PNPT1	96	76.772	ENSMZEG00005027363	PNPT1	98	77.364	Maylandia_zebra
ENSSSCG00000031882	PNPT1	93	81.831	ENSMGAG00000001952	PNPT1	98	82.548	Meleagris_gallopavo
ENSSSCG00000031882	PNPT1	99	90.114	ENSMAUG00000013652	Pnpt1	99	90.372	Mesocricetus_auratus
ENSSSCG00000031882	PNPT1	100	93.240	ENSMICG00000009369	PNPT1	99	93.402	Microcebus_murinus
ENSSSCG00000031882	PNPT1	99	92.010	ENSMOCG00000002820	Pnpt1	99	92.010	Microtus_ochrogaster
ENSSSCG00000031882	PNPT1	91	74.689	ENSMMOG00000007480	PNPT1	98	74.965	Mola_mola
ENSSSCG00000031882	PNPT1	99	82.798	ENSMODG00000001984	PNPT1	99	82.883	Monodelphis_domestica
ENSSSCG00000031882	PNPT1	96	77.015	ENSMALG00000018484	PNPT1	98	76.858	Monopterus_albus
ENSSSCG00000031882	PNPT1	98	90.874	MGP_CAROLIEiJ_G0016153	Pnpt1	99	91.074	Mus_caroli
ENSSSCG00000031882	PNPT1	98	90.339	ENSMUSG00000020464	Pnpt1	99	90.556	Mus_musculus
ENSSSCG00000031882	PNPT1	99	91.097	MGP_PahariEiJ_G0016737	Pnpt1	99	91.332	Mus_pahari
ENSSSCG00000031882	PNPT1	99	90.294	MGP_SPRETEiJ_G0016996	Pnpt1	99	91.881	Mus_spretus
ENSSSCG00000031882	PNPT1	100	93.893	ENSMPUG00000002353	PNPT1	99	93.935	Mustela_putorius_furo
ENSSSCG00000031882	PNPT1	99	92.397	ENSMLUG00000003886	PNPT1	99	92.397	Myotis_lucifugus
ENSSSCG00000031882	PNPT1	99	92.367	ENSNGAG00000020856	-	99	92.367	Nannospalax_galili
ENSSSCG00000031882	PNPT1	78	67.541	ENSNBRG00000012517	PNPT1	87	75.691	Neolamprologus_brichardi
ENSSSCG00000031882	PNPT1	99	89.642	ENSNLEG00000009354	PNPT1	99	89.651	Nomascus_leucogenys
ENSSSCG00000031882	PNPT1	91	81.864	ENSNLEG00000003327	-	98	82.038	Nomascus_leucogenys
ENSSSCG00000031882	PNPT1	100	89.541	ENSOPRG00000010232	-	99	89.651	Ochotona_princeps
ENSSSCG00000031882	PNPT1	99	91.097	ENSODEG00000012137	PNPT1	99	91.203	Octodon_degus
ENSSSCG00000031882	PNPT1	99	75.641	ENSONIG00000000983	PNPT1	97	76.203	Oreochromis_niloticus
ENSSSCG00000031882	PNPT1	90	86.080	ENSOANG00000011178	PNPT1	98	86.724	Ornithorhynchus_anatinus
ENSSSCG00000031882	PNPT1	99	93.419	ENSOCUG00000006889	PNPT1	99	93.419	Oryctolagus_cuniculus
ENSSSCG00000031882	PNPT1	94	78.125	ENSORLG00000004335	PNPT1	92	78.464	Oryzias_latipes
ENSSSCG00000031882	PNPT1	94	78.125	ENSORLG00015018951	PNPT1	99	78.691	Oryzias_latipes_hsok
ENSSSCG00000031882	PNPT1	99	89.975	ENSOGAG00000009840	PNPT1	99	90.116	Otolemur_garnettii
ENSSSCG00000031882	PNPT1	99	95.791	ENSOARG00000002164	PNPT1	99	95.791	Ovis_aries
ENSSSCG00000031882	PNPT1	99	75.255	ENSPPAG00000040514	-	98	75.291	Pan_paniscus
ENSSSCG00000031882	PNPT1	90	93.196	ENSPPAG00000024705	PNPT1	99	93.258	Pan_paniscus
ENSSSCG00000031882	PNPT1	99	94.955	ENSPPRG00000001366	PNPT1	99	94.955	Panthera_pardus
ENSSSCG00000031882	PNPT1	99	95.084	ENSPTIG00000014915	PNPT1	99	95.084	Panthera_tigris_altaica
ENSSSCG00000031882	PNPT1	99	74.935	ENSPTRG00000051411	-	98	74.967	Pan_troglodytes
ENSSSCG00000031882	PNPT1	99	93.095	ENSPTRG00000011934	PNPT1	99	93.144	Pan_troglodytes
ENSSSCG00000031882	PNPT1	99	93.223	ENSPANG00000022846	PNPT1	99	93.273	Papio_anubis
ENSSSCG00000031882	PNPT1	99	74.685	ENSPKIG00000021612	PNPT1	99	75.800	Paramormyrops_kingsleyae
ENSSSCG00000031882	PNPT1	96	83.089	ENSPSIG00000013120	PNPT1	97	83.536	Pelodiscus_sinensis
ENSSSCG00000031882	PNPT1	99	90.828	ENSPEMG00000004284	Pnpt1	99	91.366	Peromyscus_maniculatus_bairdii
ENSSSCG00000031882	PNPT1	92	73.691	ENSPMAG00000008932	PNPT1	98	73.691	Petromyzon_marinus
ENSSSCG00000031882	PNPT1	100	83.949	ENSPCIG00000010236	PNPT1	99	84.109	Phascolarctos_cinereus
ENSSSCG00000031882	PNPT1	97	76.402	ENSPFOG00000010229	PNPT1	98	77.116	Poecilia_formosa
ENSSSCG00000031882	PNPT1	97	76.402	ENSPLAG00000009008	PNPT1	98	77.116	Poecilia_latipinna
ENSSSCG00000031882	PNPT1	97	76.271	ENSPMEG00000004192	PNPT1	98	78.644	Poecilia_mexicana
ENSSSCG00000031882	PNPT1	92	77.747	ENSPREG00000003072	PNPT1	98	78.382	Poecilia_reticulata
ENSSSCG00000031882	PNPT1	99	92.455	ENSPPYG00000012399	PNPT1	99	92.497	Pongo_abelii
ENSSSCG00000031882	PNPT1	92	82.108	ENSPCAG00000010806	PNPT1	98	82.337	Procavia_capensis
ENSSSCG00000031882	PNPT1	92	81.768	ENSPCOG00000015664	PNPT1	99	81.793	Propithecus_coquereli
ENSSSCG00000031882	PNPT1	79	89.486	ENSPVAG00000005379	PNPT1	88	80.120	Pteropus_vampyrus
ENSSSCG00000031882	PNPT1	93	76.511	ENSPNYG00000000363	PNPT1	95	76.944	Pundamilia_nyererei
ENSSSCG00000031882	PNPT1	98	78.396	ENSPNAG00000010891	PNPT1	98	79.161	Pygocentrus_nattereri
ENSSSCG00000031882	PNPT1	97	91.149	ENSRNOG00000003600	Pnpt1	99	90.815	Rattus_norvegicus
ENSSSCG00000031882	PNPT1	99	92.967	ENSRBIG00000043016	PNPT1	99	93.014	Rhinopithecus_bieti
ENSSSCG00000031882	PNPT1	99	92.839	ENSRROG00000040537	PNPT1	99	92.885	Rhinopithecus_roxellana
ENSSSCG00000031882	PNPT1	99	89.935	ENSSBOG00000032574	PNPT1	98	93.795	Saimiri_boliviensis_boliviensis
ENSSSCG00000031882	PNPT1	63	86.235	ENSSHAG00000014040	PNPT1	98	86.749	Sarcophilus_harrisii
ENSSSCG00000031882	PNPT1	92	70.110	ENSSFOG00015017596	PNPT1	94	70.654	Scleropages_formosus
ENSSSCG00000031882	PNPT1	95	76.819	ENSSMAG00000018471	PNPT1	98	76.806	Scophthalmus_maximus
ENSSSCG00000031882	PNPT1	94	78.273	ENSSDUG00000018584	PNPT1	95	78.610	Seriola_dumerili
ENSSSCG00000031882	PNPT1	94	78.408	ENSSLDG00000023385	PNPT1	98	77.684	Seriola_lalandi_dorsalis
ENSSSCG00000031882	PNPT1	86	84.694	ENSSARG00000012819	PNPT1	86	84.979	Sorex_araneus
ENSSSCG00000031882	PNPT1	99	77.567	ENSSPUG00000011785	PNPT1	99	77.964	Sphenodon_punctatus
ENSSSCG00000031882	PNPT1	96	75.197	ENSSPAG00000016880	PNPT1	98	76.006	Stegastes_partitus
ENSSSCG00000031882	PNPT1	93	82.167	ENSTGUG00000006908	PNPT1	98	82.754	Taeniopygia_guttata
ENSSSCG00000031882	PNPT1	94	75.269	ENSTRUG00000005495	PNPT1	97	75.067	Takifugu_rubripes
ENSSSCG00000031882	PNPT1	93	76.027	ENSTNIG00000007460	PNPT1	99	75.815	Tetraodon_nigroviridis
ENSSSCG00000031882	PNPT1	99	62.934	ENSTBEG00000010788	PNPT1	99	63.097	Tupaia_belangeri
ENSSSCG00000031882	PNPT1	93	97.260	ENSTTRG00000000029	PNPT1	100	97.260	Tursiops_truncatus
ENSSSCG00000031882	PNPT1	91	95.418	ENSUAMG00000017133	PNPT1	99	94.872	Ursus_americanus
ENSSSCG00000031882	PNPT1	99	94.049	ENSUMAG00000018844	PNPT1	97	94.049	Ursus_maritimus
ENSSSCG00000031882	PNPT1	99	86.563	ENSVPAG00000007097	PNPT1	99	86.563	Vicugna_pacos
ENSSSCG00000031882	PNPT1	100	93.878	ENSVVUG00000010034	PNPT1	99	93.920	Vulpes_vulpes
ENSSSCG00000031882	PNPT1	94	79.595	ENSXETG00000006075	pnpt1	93	80.411	Xenopus_tropicalis
ENSSSCG00000031882	PNPT1	93	78.112	ENSXCOG00000013381	PNPT1	97	78.750	Xiphophorus_couchianus
ENSSSCG00000031882	PNPT1	96	76.517	ENSXMAG00000016907	PNPT1	98	78.750	Xiphophorus_maculatus