EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000032024 (Gene tree)
Gene ID: 110256368
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 72396 bases
Position: chr13:195975346-196047741
Accession: 110256368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036505	Npa1	PF11707.8	9.5e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000065066	URB1-201	6744	XM_021069844	ENSSSCP00000036505	2247 (aa)	XP_020925503	A0A286ZYB9

Gene Model

Click here to download ENSSSCG00000032024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000032024	URB1	99	79.523	ENSG00000142207	URB1	100	79.429	Homo_sapiens
ENSSSCG00000032024	URB1	99	42.508	ENSAPOG00000020308	urb1	99	42.595	Acanthochromis_polyacanthus
ENSSSCG00000032024	URB1	100	80.554	ENSAMEG00000011998	URB1	99	80.730	Ailuropoda_melanoleuca
ENSSSCG00000032024	URB1	95	43.991	ENSACIG00000003248	urb1	96	44.160	Amphilophus_citrinellus
ENSSSCG00000032024	URB1	99	40.472	ENSAOCG00000010364	urb1	99	40.297	Amphiprion_ocellaris
ENSSSCG00000032024	URB1	97	52.261	ENSAPEG00000010758	urb1	99	52.261	Amphiprion_percula
ENSSSCG00000032024	URB1	98	43.811	ENSATEG00000011790	urb1	96	43.767	Anabas_testudineus
ENSSSCG00000032024	URB1	97	55.350	ENSAPLG00000012791	URB1	100	55.440	Anas_platyrhynchos
ENSSSCG00000032024	URB1	99	51.661	ENSACAG00000002817	URB1	99	51.858	Anolis_carolinensis
ENSSSCG00000032024	URB1	100	78.866	ENSANAG00000024617	URB1	100	78.866	Aotus_nancymaae
ENSSSCG00000032024	URB1	98	44.182	ENSACLG00000024865	urb1	99	43.816	Astatotilapia_calliptera
ENSSSCG00000032024	URB1	99	39.656	ENSAMXG00000012306	urb1	99	39.692	Astyanax_mexicanus
ENSSSCG00000032024	URB1	99	81.886	ENSBTAG00000012412	URB1	99	82.151	Bos_taurus
ENSSSCG00000032024	URB1	100	78.455	ENSCJAG00000009118	URB1	100	78.455	Callithrix_jacchus
ENSSSCG00000032024	URB1	100	80.789	ENSCAFG00000008892	URB1	100	80.789	Canis_familiaris
ENSSSCG00000032024	URB1	100	80.571	ENSCAFG00020025987	-	100	80.571	Canis_lupus_dingo
ENSSSCG00000032024	URB1	100	79.560	ENSCAFG00020025994	-	100	79.560	Canis_lupus_dingo
ENSSSCG00000032024	URB1	99	81.674	ENSCHIG00000015645	URB1	99	81.674	Capra_hircus
ENSSSCG00000032024	URB1	100	78.188	ENSTSYG00000013286	URB1	99	78.232	Carlito_syrichta
ENSSSCG00000032024	URB1	98	74.359	ENSCAPG00000015589	URB1	99	74.359	Cavia_aperea
ENSSSCG00000032024	URB1	99	75.748	ENSCPOG00000006748	URB1	99	75.748	Cavia_porcellus
ENSSSCG00000032024	URB1	100	79.121	ENSCCAG00000021299	URB1	100	79.165	Cebus_capucinus
ENSSSCG00000032024	URB1	100	78.769	ENSCATG00000042630	URB1	100	78.813	Cercocebus_atys
ENSSSCG00000032024	URB1	100	76.703	ENSCLAG00000005262	URB1	100	76.791	Chinchilla_lanigera
ENSSSCG00000032024	URB1	100	77.112	ENSCSAG00000009584	URB1	100	77.155	Chlorocebus_sabaeus
ENSSSCG00000032024	URB1	99	57.436	ENSCPBG00000006454	URB1	99	57.486	Chrysemys_picta_bellii
ENSSSCG00000032024	URB1	100	78.901	ENSCANG00000031088	URB1	100	78.945	Colobus_angolensis_palliatus
ENSSSCG00000032024	URB1	98	73.019	ENSCGRG00001010616	Urb1	99	72.879	Cricetulus_griseus_chok1gshd
ENSSSCG00000032024	URB1	98	72.584	ENSCGRG00000015840	Urb1	99	72.584	Cricetulus_griseus_crigri
ENSSSCG00000032024	URB1	97	49.444	ENSCSEG00000012616	urb1	99	49.444	Cynoglossus_semilaevis
ENSSSCG00000032024	URB1	97	51.441	ENSCVAG00000009076	urb1	99	51.441	Cyprinodon_variegatus
ENSSSCG00000032024	URB1	99	43.253	ENSDARG00000060308	urb1	99	43.253	Danio_rerio
ENSSSCG00000032024	URB1	85	78.833	ENSDNOG00000015586	URB1	99	78.833	Dasypus_novemcinctus
ENSSSCG00000032024	URB1	100	75.979	ENSDORG00000006735	Urb1	100	75.979	Dipodomys_ordii
ENSSSCG00000032024	URB1	92	78.324	ENSETEG00000009080	URB1	92	78.324	Echinops_telfairi
ENSSSCG00000032024	URB1	100	80.202	ENSEASG00005007711	URB1	100	80.202	Equus_asinus_asinus
ENSSSCG00000032024	URB1	97	87.941	ENSECAG00000013206	URB1	100	87.941	Equus_caballus
ENSSSCG00000032024	URB1	58	87.500	ENSEEUG00000003626	-	58	87.500	Erinaceus_europaeus
ENSSSCG00000032024	URB1	99	44.548	ENSELUG00000020516	urb1	94	52.687	Esox_lucius
ENSSSCG00000032024	URB1	100	80.422	ENSFCAG00000002177	URB1	100	80.686	Felis_catus
ENSSSCG00000032024	URB1	98	51.835	ENSFALG00000004636	URB1	99	51.794	Ficedula_albicollis
ENSSSCG00000032024	URB1	100	76.032	ENSFDAG00000007288	URB1	95	76.163	Fukomys_damarensis
ENSSSCG00000032024	URB1	99	41.659	ENSFHEG00000000202	urb1	99	42.055	Fundulus_heteroclitus
ENSSSCG00000032024	URB1	92	47.830	ENSGMOG00000001838	urb1	93	47.569	Gadus_morhua
ENSSSCG00000032024	URB1	99	55.760	ENSGALG00000015887	URB1	99	55.760	Gallus_gallus
ENSSSCG00000032024	URB1	92	51.884	ENSGAFG00000020694	urb1	96	51.884	Gambusia_affinis
ENSSSCG00000032024	URB1	99	44.327	ENSGACG00000011703	urb1	99	44.171	Gasterosteus_aculeatus
ENSSSCG00000032024	URB1	99	57.024	ENSGAGG00000022544	URB1	99	57.024	Gopherus_agassizii
ENSSSCG00000032024	URB1	100	79.516	ENSGGOG00000000285	URB1	100	79.516	Gorilla_gorilla
ENSSSCG00000032024	URB1	98	44.182	ENSHBUG00000001904	urb1	99	43.816	Haplochromis_burtoni
ENSSSCG00000032024	URB1	99	74.957	ENSHGLG00000004907	URB1	99	75.087	Heterocephalus_glaber_female
ENSSSCG00000032024	URB1	99	75.461	ENSHGLG00100010749	URB1	99	75.593	Heterocephalus_glaber_male
ENSSSCG00000032024	URB1	71	52.465	ENSHCOG00000018683	urb1	98	53.452	Hippocampus_comes
ENSSSCG00000032024	URB1	99	39.100	ENSIPUG00000014721	urb1	99	39.248	Ictalurus_punctatus
ENSSSCG00000032024	URB1	100	77.700	ENSSTOG00000004539	URB1	100	77.700	Ictidomys_tridecemlineatus
ENSSSCG00000032024	URB1	98	41.268	ENSKMAG00000006001	urb1	98	46.443	Kryptolebias_marmoratus
ENSSSCG00000032024	URB1	96	41.326	ENSLBEG00000027208	urb1	99	50.955	Labrus_bergylta
ENSSSCG00000032024	URB1	99	47.125	ENSLACG00000017059	URB1	99	47.125	Latimeria_chalumnae
ENSSSCG00000032024	URB1	99	45.534	ENSLOCG00000009190	urb1	99	45.534	Lepisosteus_oculatus
ENSSSCG00000032024	URB1	99	75.986	ENSLAFG00000010407	URB1	100	75.986	Loxodonta_africana
ENSSSCG00000032024	URB1	100	78.637	ENSMFAG00000034391	URB1	97	78.681	Macaca_fascicularis
ENSSSCG00000032024	URB1	100	78.462	ENSMMUG00000010295	URB1	100	78.505	Macaca_mulatta
ENSSSCG00000032024	URB1	100	77.373	ENSMNEG00000032981	URB1	100	77.495	Macaca_nemestrina
ENSSSCG00000032024	URB1	100	78.681	ENSMLEG00000041435	URB1	100	78.945	Mandrillus_leucophaeus
ENSSSCG00000032024	URB1	99	41.971	ENSMAMG00000011238	urb1	99	41.832	Mastacembelus_armatus
ENSSSCG00000032024	URB1	98	41.425	ENSMZEG00005011862	urb1	99	41.086	Maylandia_zebra
ENSSSCG00000032024	URB1	98	55.709	ENSMGAG00000014512	URB1	99	55.709	Meleagris_gallopavo
ENSSSCG00000032024	URB1	94	77.405	ENSMAUG00000010516	Urb1	99	77.843	Mesocricetus_auratus
ENSSSCG00000032024	URB1	99	78.100	ENSMICG00000016424	URB1	99	78.232	Microcebus_murinus
ENSSSCG00000032024	URB1	99	71.743	ENSMOCG00000012613	Urb1	99	71.743	Microtus_ochrogaster
ENSSSCG00000032024	URB1	99	62.210	ENSMODG00000021076	URB1	100	62.210	Monodelphis_domestica
ENSSSCG00000032024	URB1	94	51.312	ENSMALG00000017411	urb1	97	51.312	Monopterus_albus
ENSSSCG00000032024	URB1	99	72.156	MGP_CAROLIEiJ_G0020948	Urb1	99	72.156	Mus_caroli
ENSSSCG00000032024	URB1	99	72.420	ENSMUSG00000039929	Urb1	99	72.420	Mus_musculus
ENSSSCG00000032024	URB1	99	72.376	MGP_PahariEiJ_G0016653	Urb1	99	72.376	Mus_pahari
ENSSSCG00000032024	URB1	99	72.188	MGP_SPRETEiJ_G0021854	Urb1	99	72.188	Mus_spretus
ENSSSCG00000032024	URB1	100	80.247	ENSMPUG00000001123	URB1	100	80.247	Mustela_putorius_furo
ENSSSCG00000032024	URB1	99	72.823	ENSNGAG00000001905	Urb1	99	72.823	Nannospalax_galili
ENSSSCG00000032024	URB1	81	44.391	ENSNBRG00000001049	urb1	98	44.391	Neolamprologus_brichardi
ENSSSCG00000032024	URB1	99	77.140	ENSNLEG00000026872	URB1	100	77.099	Nomascus_leucogenys
ENSSSCG00000032024	URB1	93	64.559	ENSMEUG00000010828	URB1	96	57.788	Notamacropus_eugenii
ENSSSCG00000032024	URB1	99	72.531	ENSOPRG00000013482	URB1	100	72.531	Ochotona_princeps
ENSSSCG00000032024	URB1	100	75.516	ENSODEG00000002587	URB1	99	75.604	Octodon_degus
ENSSSCG00000032024	URB1	99	44.187	ENSONIG00000005599	urb1	99	44.100	Oreochromis_niloticus
ENSSSCG00000032024	URB1	99	77.062	ENSOCUG00000009381	URB1	99	77.062	Oryctolagus_cuniculus
ENSSSCG00000032024	URB1	99	43.261	ENSORLG00000003429	urb1	99	43.217	Oryzias_latipes
ENSSSCG00000032024	URB1	99	43.229	ENSORLG00020013785	urb1	99	43.141	Oryzias_latipes_hni
ENSSSCG00000032024	URB1	99	45.657	ENSORLG00015019421	urb1	99	41.375	Oryzias_latipes_hsok
ENSSSCG00000032024	URB1	77	49.706	ENSOMEG00000002094	urb1	97	49.706	Oryzias_melastigma
ENSSSCG00000032024	URB1	99	77.959	ENSOGAG00000017140	URB1	100	77.959	Otolemur_garnettii
ENSSSCG00000032024	URB1	97	81.356	ENSOARG00000013679	URB1	99	81.271	Ovis_aries
ENSSSCG00000032024	URB1	100	79.736	ENSPPAG00000003423	URB1	100	79.736	Pan_paniscus
ENSSSCG00000032024	URB1	100	80.246	ENSPPRG00000023131	URB1	100	80.510	Panthera_pardus
ENSSSCG00000032024	URB1	92	79.497	ENSPTIG00000016125	URB1	98	79.793	Panthera_tigris_altaica
ENSSSCG00000032024	URB1	100	79.604	ENSPTRG00000013852	URB1	100	79.604	Pan_troglodytes
ENSSSCG00000032024	URB1	100	78.945	ENSPANG00000021964	URB1	100	78.989	Papio_anubis
ENSSSCG00000032024	URB1	99	46.058	ENSPKIG00000003683	urb1	98	46.068	Paramormyrops_kingsleyae
ENSSSCG00000032024	URB1	100	73.146	ENSPEMG00000021205	Urb1	99	73.090	Peromyscus_maniculatus_bairdii
ENSSSCG00000032024	URB1	80	33.526	ENSPMAG00000009733	URB1	99	34.137	Petromyzon_marinus
ENSSSCG00000032024	URB1	99	61.711	ENSPCIG00000016350	URB1	100	61.711	Phascolarctos_cinereus
ENSSSCG00000032024	URB1	96	42.955	ENSPLAG00000004371	urb1	99	42.909	Poecilia_latipinna
ENSSSCG00000032024	URB1	98	43.747	ENSPMEG00000006634	urb1	98	43.703	Poecilia_mexicana
ENSSSCG00000032024	URB1	99	44.011	ENSPREG00000013453	urb1	99	43.961	Poecilia_reticulata
ENSSSCG00000032024	URB1	99	78.896	ENSPPYG00000011359	URB1	100	78.804	Pongo_abelii
ENSSSCG00000032024	URB1	99	66.652	ENSPCAG00000007430	URB1	99	66.652	Procavia_capensis
ENSSSCG00000032024	URB1	100	79.332	ENSPCOG00000022695	URB1	100	79.464	Propithecus_coquereli
ENSSSCG00000032024	URB1	100	79.665	ENSPVAG00000000889	URB1	100	79.665	Pteropus_vampyrus
ENSSSCG00000032024	URB1	98	42.844	ENSPNYG00000010589	urb1	99	42.623	Pundamilia_nyererei
ENSSSCG00000032024	URB1	99	40.598	ENSPNAG00000019324	urb1	99	40.325	Pygocentrus_nattereri
ENSSSCG00000032024	URB1	99	72.388	ENSRNOG00000002080	Urb1	99	72.388	Rattus_norvegicus
ENSSSCG00000032024	URB1	100	78.427	ENSRBIG00000033122	URB1	100	78.427	Rhinopithecus_bieti
ENSSSCG00000032024	URB1	100	78.383	ENSRROG00000040237	URB1	100	78.383	Rhinopithecus_roxellana
ENSSSCG00000032024	URB1	100	79.130	ENSSBOG00000027672	URB1	100	79.130	Saimiri_boliviensis_boliviensis
ENSSSCG00000032024	URB1	99	62.330	ENSSHAG00000005140	URB1	100	62.330	Sarcophilus_harrisii
ENSSSCG00000032024	URB1	93	46.528	ENSSFOG00015000339	urb1	99	46.528	Scleropages_formosus
ENSSSCG00000032024	URB1	98	43.471	ENSSMAG00000003782	urb1	99	43.514	Scophthalmus_maximus
ENSSSCG00000032024	URB1	99	44.115	ENSSDUG00000012313	urb1	99	44.115	Seriola_dumerili
ENSSSCG00000032024	URB1	99	44.129	ENSSLDG00000023179	urb1	99	44.129	Seriola_lalandi_dorsalis
ENSSSCG00000032024	URB1	99	53.360	ENSSPUG00000012447	URB1	99	53.490	Sphenodon_punctatus
ENSSSCG00000032024	URB1	99	43.651	ENSSPAG00000006325	urb1	99	43.739	Stegastes_partitus
ENSSSCG00000032024	URB1	74	57.775	ENSTGUG00000013442	URB1	100	57.750	Taeniopygia_guttata
ENSSSCG00000032024	URB1	98	42.940	ENSTRUG00000009372	urb1	98	42.756	Takifugu_rubripes
ENSSSCG00000032024	URB1	99	42.052	ENSTNIG00000016277	urb1	99	41.913	Tetraodon_nigroviridis
ENSSSCG00000032024	URB1	81	80.870	ENSTBEG00000010044	URB1	81	80.870	Tupaia_belangeri
ENSSSCG00000032024	URB1	90	83.299	ENSTTRG00000007712	URB1	92	83.299	Tursiops_truncatus
ENSSSCG00000032024	URB1	100	80.862	ENSUAMG00000012231	URB1	99	81.038	Ursus_americanus
ENSSSCG00000032024	URB1	93	81.406	ENSUMAG00000017419	URB1	99	81.601	Ursus_maritimus
ENSSSCG00000032024	URB1	68	93.651	ENSVPAG00000001164	URB1	68	93.651	Vicugna_pacos
ENSSSCG00000032024	URB1	100	80.141	ENSVVUG00000000551	URB1	100	80.141	Vulpes_vulpes
ENSSSCG00000032024	URB1	99	49.569	ENSXETG00000009895	urb1	99	49.569	Xenopus_tropicalis
ENSSSCG00000032024	URB1	97	53.073	ENSXCOG00000005500	urb1	99	53.073	Xiphophorus_couchianus
ENSSSCG00000032024	URB1	97	53.631	ENSXMAG00000007253	urb1	99	53.631	Xiphophorus_maculatus