EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000032437 (Gene tree)
Gene ID: 100144417
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA binding motif protein 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 24219 bases
Position: chr2:5776542-5800760
Accession: 100144417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000013757	zf-CCHC	PF00098.23	2.8e-07	1	1
ENSSSCP00000033239	zf-CCHC	PF00098.23	2.8e-07	1	1
ENSSSCP00000046603	zf-CCHC	PF00098.23	2.8e-07	1	1
ENSSSCP00000052650	zf-CCHC	PF00098.23	2.8e-07	1	1
ENSSSCP00000013757	RRM_5	PF13893.6	5.7e-08	1	2
ENSSSCP00000013757	RRM_5	PF13893.6	5.7e-08	2	2
ENSSSCP00000033239	RRM_5	PF13893.6	5.7e-08	1	2
ENSSSCP00000033239	RRM_5	PF13893.6	5.7e-08	2	2
ENSSSCP00000046603	RRM_5	PF13893.6	5.7e-08	1	2
ENSSSCP00000046603	RRM_5	PF13893.6	5.7e-08	2	2
ENSSSCP00000052650	RRM_5	PF13893.6	5.7e-08	1	2
ENSSSCP00000052650	RRM_5	PF13893.6	5.7e-08	2	2
ENSSSCP00000013757	RRM_1	PF00076.22	2.9e-34	1	2
ENSSSCP00000013757	RRM_1	PF00076.22	2.9e-34	2	2
ENSSSCP00000033239	RRM_1	PF00076.22	2.9e-34	1	2
ENSSSCP00000033239	RRM_1	PF00076.22	2.9e-34	2	2
ENSSSCP00000046603	RRM_1	PF00076.22	2.9e-34	1	2
ENSSSCP00000046603	RRM_1	PF00076.22	2.9e-34	2	2
ENSSSCP00000052650	RRM_1	PF00076.22	2.9e-34	1	2
ENSSSCP00000052650	RRM_1	PF00076.22	2.9e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014143	RBM4-204	1950	XM_021076816	ENSSSCP00000013757	365 (aa)	XP_020932475	F1RUT1
ENSSSCT00000059106	RBM4-203	2142	XM_021076813	ENSSSCP00000052650	365 (aa)	XP_020932472	F1RUT1
ENSSSCT00000053655	RBM4-201	4002	-	ENSSSCP00000033239	365 (aa)	-	F1RUT1
ENSSSCT00000062687	RBM4-202	5462	-	ENSSSCP00000046603	365 (aa)	-	F1RUT1

Gene Model

Click here to download ENSSSCG00000032437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000032437	RBM4	100	88.219	ENSSSCG00000038304	-	100	87.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000032437	RBM4	100	87.945	ENSG00000173914	RBM4B	97	97.842	Homo_sapiens
ENSSSCG00000032437	RBM4	99	73.224	ENSG00000248643	RBM14-RBM4	100	74.044	Homo_sapiens
ENSSSCG00000032437	RBM4	100	99.178	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSSSCG00000032437	RBM4	100	100.000	ENSAMEG00000010914	RBM4	100	100.000	Ailuropoda_melanoleuca
ENSSSCG00000032437	RBM4	100	88.493	ENSAMEG00000010906	RBM4B	100	87.945	Ailuropoda_melanoleuca
ENSSSCG00000032437	RBM4	100	87.945	ENSANAG00000023478	RBM4B	97	97.842	Aotus_nancymaae
ENSSSCG00000032437	RBM4	100	88.767	ENSBTAG00000000423	RBM4B	100	88.219	Bos_taurus
ENSSSCG00000032437	RBM4	100	97.534	ENSBTAG00000031688	RBM4	100	97.534	Bos_taurus
ENSSSCG00000032437	RBM4	100	87.671	ENSCJAG00000013666	RBM4B	97	97.842	Callithrix_jacchus
ENSSSCG00000032437	RBM4	100	88.219	ENSCAFG00000012378	RBM4B	100	87.671	Canis_familiaris
ENSSSCG00000032437	RBM4	100	100.000	ENSCAFG00000012388	RBM4	100	100.000	Canis_familiaris
ENSSSCG00000032437	RBM4	100	100.000	ENSCAFG00020015515	RBM4	100	100.000	Canis_lupus_dingo
ENSSSCG00000032437	RBM4	100	88.219	ENSCAFG00020015519	RBM4B	100	87.671	Canis_lupus_dingo
ENSSSCG00000032437	RBM4	100	97.534	ENSCHIG00000020613	RBM4	100	97.534	Capra_hircus
ENSSSCG00000032437	RBM4	100	88.767	ENSCHIG00000008907	RBM4B	100	88.219	Capra_hircus
ENSSSCG00000032437	RBM4	66	79.668	ENSTSYG00000009580	RBM4B	96	78.838	Carlito_syrichta
ENSSSCG00000032437	RBM4	100	87.671	ENSCAPG00000009570	RBM4B	100	87.397	Cavia_aperea
ENSSSCG00000032437	RBM4	100	99.178	ENSCAPG00000016600	RBM4	100	99.178	Cavia_aperea
ENSSSCG00000032437	RBM4	100	99.178	ENSCPOG00000013194	RBM4	100	99.178	Cavia_porcellus
ENSSSCG00000032437	RBM4	100	87.671	ENSCPOG00000013689	RBM4B	100	87.397	Cavia_porcellus
ENSSSCG00000032437	RBM4	100	87.945	ENSCCAG00000016501	RBM4B	97	97.842	Cebus_capucinus
ENSSSCG00000032437	RBM4	55	73.632	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSSSCG00000032437	RBM4	100	87.945	ENSCATG00000035353	RBM4B	97	97.842	Cercocebus_atys
ENSSSCG00000032437	RBM4	100	87.671	ENSCLAG00000015287	RBM4B	100	87.397	Chinchilla_lanigera
ENSSSCG00000032437	RBM4	100	98.904	ENSCLAG00000014756	RBM4	100	98.904	Chinchilla_lanigera
ENSSSCG00000032437	RBM4	100	87.945	ENSCSAG00000008361	RBM4B	100	87.397	Chlorocebus_sabaeus
ENSSSCG00000032437	RBM4	100	89.041	ENSCHOG00000002892	RBM4B	100	88.493	Choloepus_hoffmanni
ENSSSCG00000032437	RBM4	62	98.678	ENSCHOG00000009753	RBM14-RBM4	100	98.678	Choloepus_hoffmanni
ENSSSCG00000032437	RBM4	100	74.413	ENSCPBG00000023800	-	100	73.560	Chrysemys_picta_bellii
ENSSSCG00000032437	RBM4	100	87.945	ENSCANG00000021868	RBM4B	97	97.842	Colobus_angolensis_palliatus
ENSSSCG00000032437	RBM4	100	95.342	ENSCGRG00001016609	-	97	98.551	Cricetulus_griseus_chok1gshd
ENSSSCG00000032437	RBM4	100	84.658	ENSCGRG00001024693	Rbm4b	100	85.205	Cricetulus_griseus_chok1gshd
ENSSSCG00000032437	RBM4	100	84.658	ENSCGRG00000012112	Rbm4b	100	85.205	Cricetulus_griseus_crigri
ENSSSCG00000032437	RBM4	100	95.342	ENSCGRG00000010183	-	97	98.551	Cricetulus_griseus_crigri
ENSSSCG00000032437	RBM4	100	99.452	ENSDNOG00000032390	RBM4	100	99.452	Dasypus_novemcinctus
ENSSSCG00000032437	RBM4	100	87.397	ENSDNOG00000045639	-	100	86.849	Dasypus_novemcinctus
ENSSSCG00000032437	RBM4	100	88.493	ENSDNOG00000019500	-	100	87.945	Dasypus_novemcinctus
ENSSSCG00000032437	RBM4	100	85.205	ENSDORG00000029108	Rbm4b	100	85.753	Dipodomys_ordii
ENSSSCG00000032437	RBM4	100	95.068	ENSDORG00000004538	-	100	95.342	Dipodomys_ordii
ENSSSCG00000032437	RBM4	62	63.877	ENSETEG00000018142	-	100	64.317	Echinops_telfairi
ENSSSCG00000032437	RBM4	100	88.219	ENSEASG00005005068	RBM4B	100	87.671	Equus_asinus_asinus
ENSSSCG00000032437	RBM4	100	98.082	ENSEASG00005005064	RBM4	100	98.082	Equus_asinus_asinus
ENSSSCG00000032437	RBM4	100	98.082	ENSECAG00000022940	RBM4	100	98.082	Equus_caballus
ENSSSCG00000032437	RBM4	100	87.945	ENSECAG00000022987	RBM4B	100	87.397	Equus_caballus
ENSSSCG00000032437	RBM4	100	88.525	ENSEEUG00000000058	RBM4B	100	87.671	Erinaceus_europaeus
ENSSSCG00000032437	RBM4	100	87.671	ENSFCAG00000007394	RBM4B	97	97.842	Felis_catus
ENSSSCG00000032437	RBM4	100	100.000	ENSFCAG00000029651	RBM4	100	100.000	Felis_catus
ENSSSCG00000032437	RBM4	100	68.817	ENSFALG00000002073	-	100	67.925	Ficedula_albicollis
ENSSSCG00000032437	RBM4	100	87.671	ENSFDAG00000015530	RBM4B	100	87.397	Fukomys_damarensis
ENSSSCG00000032437	RBM4	100	98.356	ENSFDAG00000005447	RBM4	100	98.356	Fukomys_damarensis
ENSSSCG00000032437	RBM4	100	76.923	ENSGALG00000037946	-	100	75.000	Gallus_gallus
ENSSSCG00000032437	RBM4	100	75.521	ENSGAGG00000008553	-	100	73.890	Gopherus_agassizii
ENSSSCG00000032437	RBM4	100	87.945	ENSGGOG00000011698	RBM4B	97	97.842	Gorilla_gorilla
ENSSSCG00000032437	RBM4	79	55.655	ENSHGLG00000000117	-	95	65.753	Heterocephalus_glaber_female
ENSSSCG00000032437	RBM4	100	88.219	ENSHGLG00000016412	-	100	87.671	Heterocephalus_glaber_female
ENSSSCG00000032437	RBM4	100	73.699	ENSHGLG00000002853	-	100	73.699	Heterocephalus_glaber_female
ENSSSCG00000032437	RBM4	100	98.356	ENSHGLG00000009991	RBM4	100	98.356	Heterocephalus_glaber_female
ENSSSCG00000032437	RBM4	100	87.158	ENSHGLG00100003978	-	100	86.885	Heterocephalus_glaber_male
ENSSSCG00000032437	RBM4	100	84.384	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
ENSSSCG00000032437	RBM4	96	74.785	ENSHGLG00100020033	-	100	74.785	Heterocephalus_glaber_male
ENSSSCG00000032437	RBM4	100	87.945	ENSSTOG00000011226	RBM4B	100	87.671	Ictidomys_tridecemlineatus
ENSSSCG00000032437	RBM4	100	99.726	ENSSTOG00000022811	RBM4	100	99.726	Ictidomys_tridecemlineatus
ENSSSCG00000032437	RBM4	100	84.110	ENSJJAG00000020870	Rbm4b	100	83.836	Jaculus_jaculus
ENSSSCG00000032437	RBM4	100	96.164	ENSLAFG00000028147	-	100	96.164	Loxodonta_africana
ENSSSCG00000032437	RBM4	100	84.384	ENSLAFG00000002285	RBM4B	100	84.932	Loxodonta_africana
ENSSSCG00000032437	RBM4	100	87.945	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSSSCG00000032437	RBM4	100	87.945	ENSMNEG00000043371	RBM4B	97	97.842	Macaca_nemestrina
ENSSSCG00000032437	RBM4	100	87.945	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSSSCG00000032437	RBM4	100	84.384	ENSMAUG00000017027	Rbm4b	100	84.658	Mesocricetus_auratus
ENSSSCG00000032437	RBM4	100	88.493	ENSMICG00000003820	RBM4B	97	97.842	Microcebus_murinus
ENSSSCG00000032437	RBM4	100	84.932	ENSMOCG00000001835	Rbm4b	100	85.479	Microtus_ochrogaster
ENSSSCG00000032437	RBM4	100	91.304	ENSMODG00000008056	-	100	91.576	Monodelphis_domestica
ENSSSCG00000032437	RBM4	100	95.628	MGP_CAROLIEiJ_G0022516	-	100	95.628	Mus_caroli
ENSSSCG00000032437	RBM4	100	85.479	MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	Mus_caroli
ENSSSCG00000032437	RBM4	99	68.120	MGP_CAROLIEiJ_G0022514	-	100	68.937	Mus_caroli
ENSSSCG00000032437	RBM4	100	95.628	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSSSCG00000032437	RBM4	100	85.205	ENSMUSG00000033760	Rbm4b	91	97.842	Mus_musculus
ENSSSCG00000032437	RBM4	100	95.628	ENSMUSG00000096370	Gm21992	100	95.628	Mus_musculus
ENSSSCG00000032437	RBM4	100	95.902	MGP_PahariEiJ_G0014011	-	100	95.902	Mus_pahari
ENSSSCG00000032437	RBM4	100	95.902	MGP_PahariEiJ_G0014013	-	100	95.902	Mus_pahari
ENSSSCG00000032437	RBM4	100	84.932	MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	Mus_pahari
ENSSSCG00000032437	RBM4	100	79.268	MGP_SPRETEiJ_G0023428	-	94	79.268	Mus_spretus
ENSSSCG00000032437	RBM4	100	74.306	MGP_SPRETEiJ_G0023429	-	100	75.000	Mus_spretus
ENSSSCG00000032437	RBM4	100	79.268	MGP_SPRETEiJ_G0023430	-	100	79.268	Mus_spretus
ENSSSCG00000032437	RBM4	100	88.767	ENSMPUG00000003450	RBM4B	100	88.219	Mustela_putorius_furo
ENSSSCG00000032437	RBM4	100	99.726	ENSMPUG00000003443	RBM4	100	99.726	Mustela_putorius_furo
ENSSSCG00000032437	RBM4	99	97.245	ENSMLUG00000004076	RBM4	95	97.245	Myotis_lucifugus
ENSSSCG00000032437	RBM4	100	86.575	ENSMLUG00000001290	RBM4B	100	85.753	Myotis_lucifugus
ENSSSCG00000032437	RBM4	100	86.339	ENSNGAG00000016292	Rbm4b	100	86.027	Nannospalax_galili
ENSSSCG00000032437	RBM4	100	99.178	ENSNLEG00000035021	RBM4	100	99.178	Nomascus_leucogenys
ENSSSCG00000032437	RBM4	100	87.123	ENSNLEG00000006213	RBM4B	97	97.842	Nomascus_leucogenys
ENSSSCG00000032437	RBM4	62	86.784	ENSMEUG00000005739	-	100	86.784	Notamacropus_eugenii
ENSSSCG00000032437	RBM4	100	88.767	ENSMEUG00000001445	-	100	88.767	Notamacropus_eugenii
ENSSSCG00000032437	RBM4	100	98.630	ENSOPRG00000009149	RBM4	100	98.630	Ochotona_princeps
ENSSSCG00000032437	RBM4	100	88.767	ENSOPRG00000009158	RBM4B	100	87.945	Ochotona_princeps
ENSSSCG00000032437	RBM4	100	78.630	ENSODEG00000001866	-	100	79.178	Octodon_degus
ENSSSCG00000032437	RBM4	100	87.945	ENSODEG00000017696	-	100	87.671	Octodon_degus
ENSSSCG00000032437	RBM4	100	86.027	ENSOANG00000011036	-	100	84.932	Ornithorhynchus_anatinus
ENSSSCG00000032437	RBM4	100	78.904	ENSOANG00000003143	-	84	78.630	Ornithorhynchus_anatinus
ENSSSCG00000032437	RBM4	100	99.726	ENSOCUG00000004731	RBM4	100	99.726	Oryctolagus_cuniculus
ENSSSCG00000032437	RBM4	100	88.219	ENSOCUG00000006695	LARK	100	87.671	Oryctolagus_cuniculus
ENSSSCG00000032437	RBM4	100	88.219	ENSOGAG00000015648	RBM4B	100	87.671	Otolemur_garnettii
ENSSSCG00000032437	RBM4	100	99.178	ENSOGAG00000015647	RBM4	100	99.178	Otolemur_garnettii
ENSSSCG00000032437	RBM4	100	88.493	ENSOARG00000007759	RBM4B	100	88.493	Ovis_aries
ENSSSCG00000032437	RBM4	100	93.699	ENSOARG00000007700	RBM4	100	94.247	Ovis_aries
ENSSSCG00000032437	RBM4	100	87.945	ENSPPAG00000015125	RBM4B	97	97.842	Pan_paniscus
ENSSSCG00000032437	RBM4	100	100.000	ENSPPRG00000003533	RBM4	100	100.000	Panthera_pardus
ENSSSCG00000032437	RBM4	100	87.397	ENSPPRG00000003388	RBM4B	97	97.842	Panthera_pardus
ENSSSCG00000032437	RBM4	100	87.397	ENSPTIG00000015426	RBM4B	97	97.842	Panthera_tigris_altaica
ENSSSCG00000032437	RBM4	100	85.205	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
ENSSSCG00000032437	RBM4	100	87.945	ENSPTRG00000003935	RBM4B	97	97.842	Pan_troglodytes
ENSSSCG00000032437	RBM4	100	87.945	ENSPANG00000020672	RBM4B	97	97.842	Papio_anubis
ENSSSCG00000032437	RBM4	100	74.536	ENSPSIG00000003430	-	100	73.670	Pelodiscus_sinensis
ENSSSCG00000032437	RBM4	76	77.855	ENSPSIG00000003477	-	95	77.397	Pelodiscus_sinensis
ENSSSCG00000032437	RBM4	100	85.205	ENSPEMG00000009144	Rbm4b	100	85.753	Peromyscus_maniculatus_bairdii
ENSSSCG00000032437	RBM4	100	98.082	ENSPPYG00000003012	RBM4	100	98.082	Pongo_abelii
ENSSSCG00000032437	RBM4	100	87.945	ENSPPYG00000003010	RBM4B	100	87.397	Pongo_abelii
ENSSSCG00000032437	RBM4	100	97.260	ENSPCAG00000003393	-	100	97.260	Procavia_capensis
ENSSSCG00000032437	RBM4	100	88.219	ENSPCOG00000027885	RBM4B	97	97.842	Propithecus_coquereli
ENSSSCG00000032437	RBM4	100	99.178	ENSPVAG00000010486	RBM4	100	99.178	Pteropus_vampyrus
ENSSSCG00000032437	RBM4	100	88.493	ENSPVAG00000010487	RBM4B	100	87.945	Pteropus_vampyrus
ENSSSCG00000032437	RBM4	100	96.721	ENSRNOG00000050741	Rbm4	100	96.721	Rattus_norvegicus
ENSSSCG00000032437	RBM4	100	85.753	ENSRNOG00000061795	Rbm4b	100	86.301	Rattus_norvegicus
ENSSSCG00000032437	RBM4	100	87.945	ENSRBIG00000019394	RBM4B	97	97.842	Rhinopithecus_bieti
ENSSSCG00000032437	RBM4	100	87.945	ENSRROG00000032850	RBM4B	97	97.842	Rhinopithecus_roxellana
ENSSSCG00000032437	RBM4	100	87.397	ENSSBOG00000034474	RBM4B	97	97.122	Saimiri_boliviensis_boliviensis
ENSSSCG00000032437	RBM4	100	87.123	ENSSHAG00000008386	-	100	86.849	Sarcophilus_harrisii
ENSSSCG00000032437	RBM4	100	88.219	ENSSARG00000010710	RBM4B	100	87.945	Sorex_araneus
ENSSSCG00000032437	RBM4	77	78.840	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSSSCG00000032437	RBM4	100	86.301	ENSTBEG00000003748	RBM4B	100	86.027	Tupaia_belangeri
ENSSSCG00000032437	RBM4	63	99.545	ENSTBEG00000003727	-	70	99.545	Tupaia_belangeri
ENSSSCG00000032437	RBM4	100	88.219	ENSTTRG00000011166	RBM4B	100	87.671	Tursiops_truncatus
ENSSSCG00000032437	RBM4	100	98.082	ENSTTRG00000011164	RBM4	100	98.082	Tursiops_truncatus
ENSSSCG00000032437	RBM4	100	88.767	ENSUAMG00000004745	RBM4B	100	88.219	Ursus_americanus
ENSSSCG00000032437	RBM4	100	100.000	ENSUAMG00000014882	RBM4	100	100.000	Ursus_americanus
ENSSSCG00000032437	RBM4	64	99.574	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
ENSSSCG00000032437	RBM4	100	88.219	ENSVPAG00000001950	RBM4B	100	87.671	Vicugna_pacos
ENSSSCG00000032437	RBM4	100	97.534	ENSVPAG00000001949	RBM4	100	97.534	Vicugna_pacos
ENSSSCG00000032437	RBM4	100	88.219	ENSVVUG00000010619	RBM4B	100	87.671	Vulpes_vulpes
ENSSSCG00000032437	RBM4	100	99.452	ENSVVUG00000010622	RBM4	100	99.452	Vulpes_vulpes