EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000032467 (Gene tree)
Gene ID
100523862
Gene Symbol
RAB5C
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
25268 bases
Position
chr12:20613902-20639169
Accession
100523862
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000057921MMR_HSR1PF01926.230.000211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000046903-4974-ENSSSCP00000057921216 (aa)-A0A287BN36
Gene Model
Click here to download ENSSSCG00000032467's gene model file
Pathways
Pathway IDPathway NameSource
ssc04014Ras signaling pathwayKEGG
ssc04144EndocytosisKEGG
ssc04145PhagosomeKEGG
ssc04962Vasopressin-regulated water reabsorptionKEGG
ssc05146AmoebiasisKEGG
ssc05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032467's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000032467RAB5C8937.500ENSSSCG00000006564-9537.500
ENSSSCG00000032467RAB5C7643.293ENSSSCG00000005514RAB147643.293
ENSSSCG00000032467RAB5C9042.233ENSSSCG00000032312RAB11A9442.233
ENSSSCG00000032467RAB5C9233.333ENSSSCG00000030432-9633.333
ENSSSCG00000032467RAB5C7531.902ENSSSCG00000032477NRAS8531.902
ENSSSCG00000032467RAB5C8935.354ENSSSCG00000032672RAB9B9735.354
ENSSSCG00000032467RAB5C9042.995ENSSSCG00000013600RAB11B9442.995
ENSSSCG00000032467RAB5C5531.967ENSSSCG00000011535-5331.967
ENSSSCG00000032467RAB5C9533.032ENSSSCG00000010048RAB368333.032
ENSSSCG00000032467RAB5C7937.427ENSSSCG00000002280RAB157539.623
ENSSSCG00000032467RAB5C8935.859ENSSSCG00000012123RAB9A9735.859
ENSSSCG00000032467RAB5C7536.585ENSSSCG00000024233RAB39B7736.585
ENSSSCG00000032467RAB5C7732.934ENSSSCG00000026969KRAS9530.387
ENSSSCG00000032467RAB5C8937.949ENSSSCG00000033876RAB359637.949
ENSSSCG00000032467RAB5C8035.838ENSSSCG00000029539RAB237336.842
ENSSSCG00000032467RAB5C8131.818ENSSSCG00000016434RHEB9331.818
ENSSSCG00000032467RAB5C8941.951ENSSSCG00000039186RAB259341.951
ENSSSCG00000032467RAB5C7742.442ENSSSCG00000011615RAB7A8342.442
ENSSSCG00000032467RAB5C7035.526ENSSSCG00000025041-8735.526
ENSSSCG00000032467RAB5C7539.759ENSSSCG00000012658RAB33A6039.759
ENSSSCG00000032467RAB5C9439.806ENSSSCG00000014828RAB6A9839.806
ENSSSCG00000032467RAB5C10087.037ENSSSCG00000037653RAB5A10087.037
ENSSSCG00000032467RAB5C8340.000ENSSSCG00000014900RAB309140.000
ENSSSCG00000032467RAB5C7544.720ENSSSCG00000006232RAB2A8045.395
ENSSSCG00000032467RAB5C7744.311ENSSSCG00000029544RAB2B7946.053
ENSSSCG00000032467RAB5C8131.667ENSSSCG00000031513HRAS9431.667
ENSSSCG00000032467RAB5C8538.421ENSSSCG00000038026RAB129036.444
ENSSSCG00000032467RAB5C7331.288ENSSSCG00000008577DNAJC279231.288
ENSSSCG00000032467RAB5C8942.857ENSSSCG00000012954RAB1B9642.857
ENSSSCG00000032467RAB5C6230.935ENSSSCG00000005012ARF68630.935
ENSSSCG00000032467RAB5C9441.379ENSSSCG00000036503RAB6B9841.379
ENSSSCG00000032467RAB5C9338.164ENSSSCG00000020711RAB33B8938.164
ENSSSCG00000032467RAB5C8541.799ENSSSCG00000028655RAB189439.801
ENSSSCG00000032467RAB5C8942.564ENSSSCG00000008359RAB1A9842.564
ENSSSCG00000032467RAB5C7331.250ENSSSCG00000017769RAB346231.250
ENSSSCG00000032467RAB5C5531.148ENSSSCG00000036967ARL8A6231.148
ENSSSCG00000032467RAB5C9047.938ENSSSCG00000007513RAB22A9847.938
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000032467RAB5C10099.074ENSG00000108774RAB5C100100.000Homo_sapiens
ENSSSCG00000032467RAB5C9988.837ENSAPOG00000016864rab5c9891.163Acanthochromis_polyacanthus
ENSSSCG00000032467RAB5C10099.074ENSAMEG00000006003RAB5C10099.074Ailuropoda_melanoleuca
ENSSSCG00000032467RAB5C9988.426ENSACIG00000010896rab5c9890.278Amphilophus_citrinellus
ENSSSCG00000032467RAB5C9988.889ENSAOCG00000016614rab5c9891.204Amphiprion_ocellaris
ENSSSCG00000032467RAB5C9788.626ENSAPEG00000017868-9790.995Amphiprion_percula
ENSSSCG00000032467RAB5C10089.450ENSATEG00000001937rab5c10090.826Anabas_testudineus
ENSSSCG00000032467RAB5C9499.020ENSANAG00000025390RAB5C10099.020Aotus_nancymaae
ENSSSCG00000032467RAB5C9987.500ENSACLG00000002706rab5c9890.278Astatotilapia_calliptera
ENSSSCG00000032467RAB5C9689.100ENSACLG00000008615-9988.584Astatotilapia_calliptera
ENSSSCG00000032467RAB5C9989.401ENSAMXG00000043717rab5c9891.244Astyanax_mexicanus
ENSSSCG00000032467RAB5C9688.095ENSAMXG00000037267-9990.476Astyanax_mexicanus
ENSSSCG00000032467RAB5C100100.000ENSBTAG00000006982RAB5C100100.000Bos_taurus
ENSSSCG00000032467RAB5C9976.279WBGene00004268rab-59976.279Caenorhabditis_elegans
ENSSSCG00000032467RAB5C10098.611ENSCAFG00000015629RAB5C10098.611Canis_familiaris
ENSSSCG00000032467RAB5C10098.611ENSCAFG00020013537RAB5C10098.611Canis_lupus_dingo
ENSSSCG00000032467RAB5C100100.000ENSCHIG00000012960RAB5C100100.000Capra_hircus
ENSSSCG00000032467RAB5C10099.537ENSTSYG00000030531RAB5C10099.537Carlito_syrichta
ENSSSCG00000032467RAB5C10098.611ENSCCAG00000025940RAB5C10098.611Cebus_capucinus
ENSSSCG00000032467RAB5C10099.074ENSCATG00000040873RAB5C10099.074Cercocebus_atys
ENSSSCG00000032467RAB5C10098.148ENSCLAG00000016650RAB5C10098.148Chinchilla_lanigera
ENSSSCG00000032467RAB5C8298.876ENSCHOG00000009886RAB5C10098.876Choloepus_hoffmanni
ENSSSCG00000032467RAB5C9977.103ENSCING00000003340-9977.103Ciona_intestinalis
ENSSSCG00000032467RAB5C9975.455ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSSSCG00000032467RAB5C10098.148ENSCGRG00001014226Rab5c10098.148Cricetulus_griseus_chok1gshd
ENSSSCG00000032467RAB5C10098.148ENSCGRG00000007534Rab5c10098.148Cricetulus_griseus_crigri
ENSSSCG00000032467RAB5C9990.741ENSCSEG00000017024rab5c9890.741Cynoglossus_semilaevis
ENSSSCG00000032467RAB5C9988.889ENSCVAG00000009550rab5c9890.741Cyprinodon_variegatus
ENSSSCG00000032467RAB5C10098.611ENSDNOG00000038853RAB5C10098.611Dasypus_novemcinctus
ENSSSCG00000032467RAB5C10098.611ENSDORG00000006819Rab5c10098.611Dipodomys_ordii
ENSSSCG00000032467RAB5C9975.117FBgn0014010Rab59575.117Drosophila_melanogaster
ENSSSCG00000032467RAB5C9980.000ENSEBUG00000014794rab5c10080.000Eptatretus_burgeri
ENSSSCG00000032467RAB5C10099.074ENSEASG00005009281RAB5C10099.074Equus_asinus_asinus
ENSSSCG00000032467RAB5C10099.537ENSECAG00000025054RAB5C10099.537Equus_caballus
ENSSSCG00000032467RAB5C10099.074ENSEEUG00000002790RAB5C10099.074Erinaceus_europaeus
ENSSSCG00000032467RAB5C9987.500ENSELUG00000018516rab5c9989.815Esox_lucius
ENSSSCG00000032467RAB5C9987.963ENSELUG00000010439-9887.963Esox_lucius
ENSSSCG00000032467RAB5C100100.000ENSFCAG00000002148RAB5C100100.000Felis_catus
ENSSSCG00000032467RAB5C10096.296ENSFDAG00000021541RAB5C10096.296Fukomys_damarensis
ENSSSCG00000032467RAB5C9990.783ENSFHEG00000015268-9990.783Fundulus_heteroclitus
ENSSSCG00000032467RAB5C9988.889ENSFHEG00000012117rab5c9890.741Fundulus_heteroclitus
ENSSSCG00000032467RAB5C9987.500ENSGMOG00000015096rab5c9890.278Gadus_morhua
ENSSSCG00000032467RAB5C7887.574ENSGMOG00000001876-9887.574Gadus_morhua
ENSSSCG00000032467RAB5C9989.352ENSGAFG00000000884rab5c9891.204Gambusia_affinis
ENSSSCG00000032467RAB5C9690.952ENSGAFG00000003642-9988.182Gambusia_affinis
ENSSSCG00000032467RAB5C8794.149ENSGACG00000008659rab5c9886.574Gasterosteus_aculeatus
ENSSSCG00000032467RAB5C10099.074ENSGGOG00000005472RAB5C10099.074Gorilla_gorilla
ENSSSCG00000032467RAB5C9689.100ENSHBUG00000006823-9988.584Haplochromis_burtoni
ENSSSCG00000032467RAB5C9987.500ENSHBUG00000002014rab5c9890.278Haplochromis_burtoni
ENSSSCG00000032467RAB5C10095.833ENSHGLG00000012067RAB5C10095.833Heterocephalus_glaber_female
ENSSSCG00000032467RAB5C9781.604ENSHCOG00000020238-10080.000Hippocampus_comes
ENSSSCG00000032467RAB5C9989.401ENSHCOG00000004662rab5c9790.783Hippocampus_comes
ENSSSCG00000032467RAB5C9687.143ENSIPUG00000020082rab5c9888.073Ictalurus_punctatus
ENSSSCG00000032467RAB5C10097.685ENSSTOG00000006620RAB5C10097.685Ictidomys_tridecemlineatus
ENSSSCG00000032467RAB5C10099.074ENSJJAG00000021181Rab5c10099.074Jaculus_jaculus
ENSSSCG00000032467RAB5C9988.426ENSKMAG00000020038rab5c9890.741Kryptolebias_marmoratus
ENSSSCG00000032467RAB5C9988.018ENSKMAG00000017417-9988.018Kryptolebias_marmoratus
ENSSSCG00000032467RAB5C10087.615ENSLBEG00000010408-9987.615Labrus_bergylta
ENSSSCG00000032467RAB5C9989.815ENSLBEG00000004128rab5c9891.667Labrus_bergylta
ENSSSCG00000032467RAB5C9992.991ENSLOCG00000012566rab5c10092.991Lepisosteus_oculatus
ENSSSCG00000032467RAB5C10099.074ENSMFAG00000039627RAB5C10099.074Macaca_fascicularis
ENSSSCG00000032467RAB5C10099.074ENSMNEG00000000355RAB5C10099.074Macaca_nemestrina
ENSSSCG00000032467RAB5C9987.963ENSMAMG00000022322rab5c9890.278Mastacembelus_armatus
ENSSSCG00000032467RAB5C9988.018ENSMAMG00000016207-9988.018Mastacembelus_armatus
ENSSSCG00000032467RAB5C9987.500ENSMZEG00005022735rab5c9890.278Maylandia_zebra
ENSSSCG00000032467RAB5C9689.100ENSMZEG00005021090-9988.584Maylandia_zebra
ENSSSCG00000032467RAB5C10099.074ENSMAUG00000015005Rab5c10099.074Mesocricetus_auratus
ENSSSCG00000032467RAB5C10099.074ENSMICG00000041608RAB5C10099.074Microcebus_murinus
ENSSSCG00000032467RAB5C10098.148ENSMOCG00000018531-10098.148Microtus_ochrogaster
ENSSSCG00000032467RAB5C10089.450ENSMMOG00000020621rab5c9989.450Mola_mola
ENSSSCG00000032467RAB5C9987.156ENSMALG00000022348-9987.156Monopterus_albus
ENSSSCG00000032467RAB5C9784.360ENSMALG00000006052rab5c9684.186Monopterus_albus
ENSSSCG00000032467RAB5C10098.611MGP_CAROLIEiJ_G0017184Rab5c10098.611Mus_caroli
ENSSSCG00000032467RAB5C10098.611ENSMUSG00000019173Rab5c10098.611Mus_musculus
ENSSSCG00000032467RAB5C10098.611MGP_PahariEiJ_G0018314Rab5c10098.611Mus_pahari
ENSSSCG00000032467RAB5C10098.611MGP_SPRETEiJ_G0018027Rab5c10098.611Mus_spretus
ENSSSCG00000032467RAB5C10099.074ENSMPUG00000010554RAB5C10099.074Mustela_putorius_furo
ENSSSCG00000032467RAB5C10098.148ENSNGAG00000010286Rab5c10098.148Nannospalax_galili
ENSSSCG00000032467RAB5C9988.426ENSNBRG00000018165rab5c9891.204Neolamprologus_brichardi
ENSSSCG00000032467RAB5C9689.100ENSNBRG00000016922-9988.584Neolamprologus_brichardi
ENSSSCG00000032467RAB5C8292.697ENSOPRG00000008255RAB5C10092.697Ochotona_princeps
ENSSSCG00000032467RAB5C10097.222ENSODEG00000017920RAB5C10097.222Octodon_degus
ENSSSCG00000032467RAB5C9988.426ENSONIG00000001113rab5c9891.204Oreochromis_niloticus
ENSSSCG00000032467RAB5C10088.073ENSORLG00000003882rab5c10089.450Oryzias_latipes
ENSSSCG00000032467RAB5C10088.991ENSORLG00020008388rab5c10088.991Oryzias_latipes_hni
ENSSSCG00000032467RAB5C10088.073ENSORLG00015021900rab5c10089.450Oryzias_latipes_hsok
ENSSSCG00000032467RAB5C10088.073ENSOMEG00000023078rab5c10089.450Oryzias_melastigma
ENSSSCG00000032467RAB5C10099.074ENSOGAG00000009456RAB5C10099.074Otolemur_garnettii
ENSSSCG00000032467RAB5C100100.000ENSOARG00000018768RAB5C100100.000Ovis_aries
ENSSSCG00000032467RAB5C10099.074ENSPPAG00000037206RAB5C10099.074Pan_paniscus
ENSSSCG00000032467RAB5C100100.000ENSPPRG00000005745RAB5C100100.000Panthera_pardus
ENSSSCG00000032467RAB5C100100.000ENSPTIG00000008177RAB5C100100.000Panthera_tigris_altaica
ENSSSCG00000032467RAB5C10099.074ENSPTRG00000009194RAB5C10099.074Pan_troglodytes
ENSSSCG00000032467RAB5C9988.837ENSPKIG00000001237-9988.837Paramormyrops_kingsleyae
ENSSSCG00000032467RAB5C9987.500ENSPKIG00000020112-9987.500Paramormyrops_kingsleyae
ENSSSCG00000032467RAB5C9985.648ENSPMGG00000010792rab5c9789.573Periophthalmus_magnuspinnatus
ENSSSCG00000032467RAB5C10098.148ENSPEMG00000017971Rab5c10098.148Peromyscus_maniculatus_bairdii
ENSSSCG00000032467RAB5C9979.439ENSPMAG00000007867rab5c9979.439Petromyzon_marinus
ENSSSCG00000032467RAB5C9978.378ENSPMAG00000000008rab5c10078.378Petromyzon_marinus
ENSSSCG00000032467RAB5C9980.000ENSPMAG00000001399rab5c10080.000Petromyzon_marinus
ENSSSCG00000032467RAB5C10097.222ENSPCIG00000020225-10097.222Phascolarctos_cinereus
ENSSSCG00000032467RAB5C9989.862ENSPLAG00000016333-9989.862Poecilia_latipinna
ENSSSCG00000032467RAB5C9989.352ENSPLAG00000004790rab5c9891.204Poecilia_latipinna
ENSSSCG00000032467RAB5C9888.263ENSPMEG00000012614-9888.584Poecilia_mexicana
ENSSSCG00000032467RAB5C9989.352ENSPMEG00000011336rab5c9891.204Poecilia_mexicana
ENSSSCG00000032467RAB5C8792.063ENSPREG00000022167-8993.443Poecilia_reticulata
ENSSSCG00000032467RAB5C9989.352ENSPREG00000010146rab5c9891.204Poecilia_reticulata
ENSSSCG00000032467RAB5C10099.074ENSPPYG00000008398RAB5C10099.074Pongo_abelii
ENSSSCG00000032467RAB5C10098.148ENSPCAG00000016412RAB5C10098.148Procavia_capensis
ENSSSCG00000032467RAB5C10098.148ENSPCOG00000026327RAB5C10098.148Propithecus_coquereli
ENSSSCG00000032467RAB5C10099.537ENSPVAG00000003867RAB5C10099.537Pteropus_vampyrus
ENSSSCG00000032467RAB5C9987.500ENSPNYG00000010615rab5c9890.278Pundamilia_nyererei
ENSSSCG00000032467RAB5C9689.100ENSPNYG00000015851-9988.584Pundamilia_nyererei
ENSSSCG00000032467RAB5C9990.783ENSPNAG00000028138rab5c9890.783Pygocentrus_nattereri
ENSSSCG00000032467RAB5C9786.321ENSPNAG00000002218-9988.679Pygocentrus_nattereri
ENSSSCG00000032467RAB5C10099.074ENSRNOG00000018568Rab5c10099.074Rattus_norvegicus
ENSSSCG00000032467RAB5C10099.074ENSRBIG00000031376RAB5C10099.074Rhinopithecus_bieti
ENSSSCG00000032467RAB5C10099.074ENSRROG00000032895RAB5C10099.074Rhinopithecus_roxellana
ENSSSCG00000032467RAB5C10098.611ENSSBOG00000032552-10098.611Saimiri_boliviensis_boliviensis
ENSSSCG00000032467RAB5C10097.685ENSSHAG00000005267-10097.685Sarcophilus_harrisii
ENSSSCG00000032467RAB5C9987.097ENSSFOG00015009988-9987.097Scleropages_formosus
ENSSSCG00000032467RAB5C9691.827ENSSMAG00000007323rab5c9889.815Scophthalmus_maximus
ENSSSCG00000032467RAB5C9991.204ENSSDUG00000023008rab5c9891.204Seriola_dumerili
ENSSSCG00000032467RAB5C9990.741ENSSLDG00000017771rab5c9890.741Seriola_lalandi_dorsalis
ENSSSCG00000032467RAB5C10095.833ENSSPUG00000012950-10095.833Sphenodon_punctatus
ENSSSCG00000032467RAB5C9989.352ENSSPAG00000006436rab5c9892.130Stegastes_partitus
ENSSSCG00000032467RAB5C9987.500ENSTRUG00000015590rab5c9889.815Takifugu_rubripes
ENSSSCG00000032467RAB5C9690.431ENSTNIG00000011711rab5c9590.431Tetraodon_nigroviridis
ENSSSCG00000032467RAB5C10099.074ENSTBEG00000007092RAB5C10099.074Tupaia_belangeri
ENSSSCG00000032467RAB5C10099.074ENSTTRG00000006673RAB5C10099.074Tursiops_truncatus
ENSSSCG00000032467RAB5C10099.074ENSUAMG00000024343RAB5C10099.074Ursus_americanus
ENSSSCG00000032467RAB5C10099.074ENSUMAG00000023270RAB5C10099.074Ursus_maritimus
ENSSSCG00000032467RAB5C9988.889ENSXCOG00000016788rab5c9891.204Xiphophorus_couchianus
ENSSSCG00000032467RAB5C9691.429ENSXCOG00000006300-9988.636Xiphophorus_couchianus
ENSSSCG00000032467RAB5C9989.352ENSXMAG00000003266rab5c9891.204Xiphophorus_maculatus
ENSSSCG00000032467RAB5C9990.323ENSXMAG00000022179-9990.323Xiphophorus_maculatus

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