EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000032583 (Gene tree)
Gene ID: 100154509
Gene Symbol: SRSF5
Alias: HRS|SFRS5|SRP40
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 54289 bases
Position: chr7:93393360-93447648
Accession: 100154509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000002510	RRM_1	PF00076.22	1.5e-30	1	2
ENSSSCP00000002510	RRM_1	PF00076.22	1.5e-30	2	2
ENSSSCP00000033145	RRM_1	PF00076.22	1.5e-30	1	2
ENSSSCP00000033145	RRM_1	PF00076.22	1.5e-30	2	2
ENSSSCP00000036224	RRM_1	PF00076.22	1.5e-30	1	2
ENSSSCP00000036224	RRM_1	PF00076.22	1.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000039060	SRSF5-201	2365	XM_005666334	ENSSSCP00000033145	271 (aa)	XP_005666391	F1S4B2
ENSSSCT00000052294	SRSF5-202	5268	XM_001927419	ENSSSCP00000036224	272 (aa)	XP_001927454	A0A286ZX74
ENSSSCT00000002574	SRSF5-203	1502	-	ENSSSCP00000002510	271 (aa)	-	F1S4B2

Gene Model

Click here to download ENSSSCG00000032583's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000032583	SRSF5	59	37.952	ENSSSCG00000009906	SRSF9	68	39.394
ENSSSCG00000032583	SRSF5	66	64.835	ENSSSCG00000007362	SRSF6	66	54.626
ENSSSCG00000032583	SRSF5	59	45.509	ENSSSCG00000017626	-	65	46.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000032583	SRSF5	100	97.810	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSSSCG00000032583	SRSF5	67	82.540	ENSAPOG00000008642	srsf5b	63	85.405	Acanthochromis_polyacanthus
ENSSSCG00000032583	SRSF5	100	99.265	ENSAMEG00000014574	SRSF5	100	99.265	Ailuropoda_melanoleuca
ENSSSCG00000032583	SRSF5	92	70.301	ENSACIG00000010742	srsf5b	81	75.969	Amphilophus_citrinellus
ENSSSCG00000032583	SRSF5	96	66.667	ENSAOCG00000005719	srsf5b	63	85.405	Amphiprion_ocellaris
ENSSSCG00000032583	SRSF5	96	66.667	ENSAPEG00000007830	srsf5b	63	85.405	Amphiprion_percula
ENSSSCG00000032583	SRSF5	92	67.969	ENSATEG00000019112	srsf5b	63	82.258	Anabas_testudineus
ENSSSCG00000032583	SRSF5	98	92.884	ENSAPLG00000014681	SRSF5	67	94.444	Anas_platyrhynchos
ENSSSCG00000032583	SRSF5	100	94.872	ENSACAG00000005143	SRSF5	67	98.889	Anolis_carolinensis
ENSSSCG00000032583	SRSF5	100	97.802	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSSSCG00000032583	SRSF5	92	70.566	ENSACLG00000026424	srsf5b	63	84.324	Astatotilapia_calliptera
ENSSSCG00000032583	SRSF5	67	82.703	ENSAMXG00000011932	srsf5b	84	80.000	Astyanax_mexicanus
ENSSSCG00000032583	SRSF5	100	99.265	ENSBTAG00000011596	SRSF5	100	99.265	Bos_taurus
ENSSSCG00000032583	SRSF5	100	97.810	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSSSCG00000032583	SRSF5	100	99.265	ENSCAFG00000016589	SRSF5	100	99.265	Canis_familiaris
ENSSSCG00000032583	SRSF5	100	99.265	ENSCAFG00020005661	SRSF5	100	99.265	Canis_lupus_dingo
ENSSSCG00000032583	SRSF5	100	98.540	ENSCHIG00000016794	SRSF5	100	98.540	Capra_hircus
ENSSSCG00000032583	SRSF5	100	97.826	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSSSCG00000032583	SRSF5	100	97.810	ENSCAPG00000008801	SRSF5	100	97.810	Cavia_aperea
ENSSSCG00000032583	SRSF5	100	97.445	ENSCPOG00000039926	SRSF5	100	97.445	Cavia_porcellus
ENSSSCG00000032583	SRSF5	100	97.810	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSSSCG00000032583	SRSF5	100	97.445	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSSSCG00000032583	SRSF5	100	98.529	ENSCLAG00000004755	SRSF5	100	98.529	Chinchilla_lanigera
ENSSSCG00000032583	SRSF5	100	97.810	ENSCSAG00000013041	SRSF5	100	97.810	Chlorocebus_sabaeus
ENSSSCG00000032583	SRSF5	100	95.588	ENSCPBG00000021653	SRSF5	100	95.588	Chrysemys_picta_bellii
ENSSSCG00000032583	SRSF5	100	97.810	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000032583	SRSF5	100	98.893	ENSCGRG00001015339	Srsf5	100	98.893	Cricetulus_griseus_chok1gshd
ENSSSCG00000032583	SRSF5	100	98.897	ENSCGRG00000009833	Srsf5	100	98.897	Cricetulus_griseus_crigri
ENSSSCG00000032583	SRSF5	88	75.502	ENSCSEG00000003801	srsf5b	64	82.353	Cynoglossus_semilaevis
ENSSSCG00000032583	SRSF5	67	82.540	ENSCVAG00000017240	srsf5b	63	82.039	Cyprinodon_variegatus
ENSSSCG00000032583	SRSF5	66	82.418	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSSSCG00000032583	SRSF5	100	98.162	ENSDNOG00000006160	SRSF5	100	98.162	Dasypus_novemcinctus
ENSSSCG00000032583	SRSF5	100	98.524	ENSDORG00000003989	Srsf5	100	98.524	Dipodomys_ordii
ENSSSCG00000032583	SRSF5	100	88.235	ENSETEG00000020396	SRSF5	88	90.756	Echinops_telfairi
ENSSSCG00000032583	SRSF5	67	64.865	ENSEBUG00000006229	srsf5b	93	57.959	Eptatretus_burgeri
ENSSSCG00000032583	SRSF5	100	99.265	ENSEASG00005016615	SRSF5	100	99.265	Equus_asinus_asinus
ENSSSCG00000032583	SRSF5	100	98.897	ENSECAG00000026873	SRSF5	100	98.897	Equus_caballus
ENSSSCG00000032583	SRSF5	67	78.866	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
ENSSSCG00000032583	SRSF5	100	99.265	ENSFCAG00000008848	SRSF5	100	99.265	Felis_catus
ENSSSCG00000032583	SRSF5	66	95.531	ENSFALG00000004979	SRSF5	67	94.972	Ficedula_albicollis
ENSSSCG00000032583	SRSF5	100	98.162	ENSFDAG00000011562	SRSF5	100	98.162	Fukomys_damarensis
ENSSSCG00000032583	SRSF5	96	70.251	ENSFHEG00000009476	srsf5b	60	84.324	Fundulus_heteroclitus
ENSSSCG00000032583	SRSF5	67	67.257	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
ENSSSCG00000032583	SRSF5	100	94.096	ENSGALG00000009421	SRSF5	90	90.323	Gallus_gallus
ENSSSCG00000032583	SRSF5	66	61.134	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSSSCG00000032583	SRSF5	100	95.588	ENSGAGG00000004447	SRSF5	100	95.588	Gopherus_agassizii
ENSSSCG00000032583	SRSF5	100	97.810	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSSSCG00000032583	SRSF5	67	81.481	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
ENSSSCG00000032583	SRSF5	100	98.162	ENSHGLG00000010147	SRSF5	100	98.162	Heterocephalus_glaber_female
ENSSSCG00000032583	SRSF5	100	66.300	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSSSCG00000032583	SRSF5	100	98.162	ENSHGLG00100015328	SRSF5	100	98.162	Heterocephalus_glaber_male
ENSSSCG00000032583	SRSF5	67	75.521	ENSHCOG00000005592	srsf5b	64	77.128	Hippocampus_comes
ENSSSCG00000032583	SRSF5	100	98.529	ENSSTOG00000020672	SRSF5	100	98.529	Ictidomys_tridecemlineatus
ENSSSCG00000032583	SRSF5	100	99.632	ENSJJAG00000001688	Srsf5	100	99.632	Jaculus_jaculus
ENSSSCG00000032583	SRSF5	67	82.888	ENSKMAG00000020486	srsf5b	84	79.528	Kryptolebias_marmoratus
ENSSSCG00000032583	SRSF5	67	82.723	ENSLBEG00000013647	srsf5b	63	82.353	Labrus_bergylta
ENSSSCG00000032583	SRSF5	100	85.036	ENSLACG00000005874	SRSF5	67	90.608	Latimeria_chalumnae
ENSSSCG00000032583	SRSF5	97	71.747	ENSLOCG00000012438	srsf5b	69	82.703	Lepisosteus_oculatus
ENSSSCG00000032583	SRSF5	100	98.529	ENSLAFG00000005260	SRSF5	100	98.529	Loxodonta_africana
ENSSSCG00000032583	SRSF5	100	97.810	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSSSCG00000032583	SRSF5	100	97.810	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSSSCG00000032583	SRSF5	100	97.445	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSSSCG00000032583	SRSF5	86	74.494	ENSMAMG00000002673	srsf5b	63	80.978	Mastacembelus_armatus
ENSSSCG00000032583	SRSF5	92	70.566	ENSMZEG00005003550	srsf5b	63	84.324	Maylandia_zebra
ENSSSCG00000032583	SRSF5	74	91.542	ENSMGAG00000011835	SRSF5	62	91.429	Meleagris_gallopavo
ENSSSCG00000032583	SRSF5	100	98.897	ENSMAUG00000009544	Srsf5	100	98.897	Mesocricetus_auratus
ENSSSCG00000032583	SRSF5	100	98.524	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSSSCG00000032583	SRSF5	100	98.529	ENSMOCG00000013134	Srsf5	100	98.529	Microtus_ochrogaster
ENSSSCG00000032583	SRSF5	96	68.148	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
ENSSSCG00000032583	SRSF5	66	99.441	ENSMODG00000011362	SRSF5	67	99.441	Monodelphis_domestica
ENSSSCG00000032583	SRSF5	67	83.684	ENSMALG00000021875	srsf5b	84	75.194	Monopterus_albus
ENSSSCG00000032583	SRSF5	100	98.897	ENSMUSG00000021134	Srsf5	100	98.897	Mus_musculus
ENSSSCG00000032583	SRSF5	100	98.897	MGP_PahariEiJ_G0029659	Srsf5	100	98.897	Mus_pahari
ENSSSCG00000032583	SRSF5	100	99.265	ENSMPUG00000007458	SRSF5	100	99.265	Mustela_putorius_furo
ENSSSCG00000032583	SRSF5	100	95.699	ENSMLUG00000011939	SRSF5	100	95.699	Myotis_lucifugus
ENSSSCG00000032583	SRSF5	100	99.265	ENSNGAG00000010073	-	100	99.265	Nannospalax_galili
ENSSSCG00000032583	SRSF5	92	70.189	ENSNBRG00000001285	srsf5b	63	83.422	Neolamprologus_brichardi
ENSSSCG00000032583	SRSF5	100	97.810	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSSSCG00000032583	SRSF5	100	95.714	ENSOPRG00000008286	SRSF5	100	95.714	Ochotona_princeps
ENSSSCG00000032583	SRSF5	100	97.426	ENSODEG00000013469	-	100	97.426	Octodon_degus
ENSSSCG00000032583	SRSF5	66	97.765	ENSODEG00000000700	-	68	97.765	Octodon_degus
ENSSSCG00000032583	SRSF5	92	70.566	ENSONIG00000005759	srsf5b	63	84.324	Oreochromis_niloticus
ENSSSCG00000032583	SRSF5	100	92.279	ENSOANG00000013336	SRSF5	89	93.277	Ornithorhynchus_anatinus
ENSSSCG00000032583	SRSF5	100	97.464	ENSOCUG00000009274	SRSF5	100	97.464	Oryctolagus_cuniculus
ENSSSCG00000032583	SRSF5	67	78.534	ENSORLG00000029854	srsf5b	58	79.787	Oryzias_latipes
ENSSSCG00000032583	SRSF5	92	64.794	ENSORLG00015001720	srsf5b	63	81.818	Oryzias_latipes_hsok
ENSSSCG00000032583	SRSF5	100	98.162	ENSOGAG00000015122	SRSF5	100	98.162	Otolemur_garnettii
ENSSSCG00000032583	SRSF5	100	97.810	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSSSCG00000032583	SRSF5	100	99.265	ENSPPRG00000012903	SRSF5	100	99.265	Panthera_pardus
ENSSSCG00000032583	SRSF5	100	99.265	ENSPTIG00000018589	SRSF5	100	99.265	Panthera_tigris_altaica
ENSSSCG00000032583	SRSF5	100	97.810	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSSSCG00000032583	SRSF5	100	97.445	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSSSCG00000032583	SRSF5	100	95.221	ENSPSIG00000012522	SRSF5	100	95.221	Pelodiscus_sinensis
ENSSSCG00000032583	SRSF5	100	98.893	ENSPEMG00000020173	Srsf5	100	98.893	Peromyscus_maniculatus_bairdii
ENSSSCG00000032583	SRSF5	99	56.333	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
ENSSSCG00000032583	SRSF5	66	99.441	ENSPCIG00000011877	SRSF5	67	99.441	Phascolarctos_cinereus
ENSSSCG00000032583	SRSF5	96	71.273	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
ENSSSCG00000032583	SRSF5	100	97.810	ENSPPYG00000005945	SRSF5	100	97.810	Pongo_abelii
ENSSSCG00000032583	SRSF5	54	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSSSCG00000032583	SRSF5	100	98.529	ENSPCOG00000014442	SRSF5	100	98.529	Propithecus_coquereli
ENSSSCG00000032583	SRSF5	100	77.941	ENSPVAG00000009828	SRSF5	100	77.941	Pteropus_vampyrus
ENSSSCG00000032583	SRSF5	92	71.318	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSSSCG00000032583	SRSF5	67	82.162	ENSPNAG00000011262	srsf5b	84	79.200	Pygocentrus_nattereri
ENSSSCG00000032583	SRSF5	100	98.893	ENSRNOG00000005513	Srsf5	100	98.893	Rattus_norvegicus
ENSSSCG00000032583	SRSF5	100	97.810	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSSSCG00000032583	SRSF5	100	97.810	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000032583	SRSF5	100	97.810	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000032583	SRSF5	66	99.441	ENSSHAG00000002871	SRSF5	67	99.441	Sarcophilus_harrisii
ENSSSCG00000032583	SRSF5	67	77.723	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
ENSSSCG00000032583	SRSF5	95	65.809	ENSSDUG00000005766	srsf5b	65	81.081	Seriola_dumerili
ENSSSCG00000032583	SRSF5	92	66.792	ENSSLDG00000023255	srsf5b	84	75.000	Seriola_lalandi_dorsalis
ENSSSCG00000032583	SRSF5	100	88.971	ENSSARG00000001059	SRSF5	88	88.655	Sorex_araneus
ENSSSCG00000032583	SRSF5	100	91.103	ENSSPUG00000002464	SRSF5	90	91.729	Sphenodon_punctatus
ENSSSCG00000032583	SRSF5	67	82.011	ENSSPAG00000015325	srsf5b	63	84.865	Stegastes_partitus
ENSSSCG00000032583	SRSF5	89	92.946	ENSTGUG00000011425	SRSF5	67	94.972	Taeniopygia_guttata
ENSSSCG00000032583	SRSF5	67	83.333	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
ENSSSCG00000032583	SRSF5	98	64.982	ENSTNIG00000016411	srsf5b	66	84.153	Tetraodon_nigroviridis
ENSSSCG00000032583	SRSF5	100	90.288	ENSTBEG00000001972	SRSF5	65	97.765	Tupaia_belangeri
ENSSSCG00000032583	SRSF5	99	98.535	ENSTTRG00000003318	SRSF5	100	98.535	Tursiops_truncatus
ENSSSCG00000032583	SRSF5	100	99.265	ENSUAMG00000014184	SRSF5	100	99.265	Ursus_americanus
ENSSSCG00000032583	SRSF5	100	100.000	ENSUMAG00000009827	SRSF5	100	99.262	Ursus_maritimus
ENSSSCG00000032583	SRSF5	100	98.529	ENSVPAG00000006448	SRSF5	100	98.529	Vicugna_pacos
ENSSSCG00000032583	SRSF5	100	99.265	ENSVVUG00000003790	SRSF5	100	99.265	Vulpes_vulpes
ENSSSCG00000032583	SRSF5	93	84.231	ENSXETG00000002211	srsf5	67	92.308	Xenopus_tropicalis
ENSSSCG00000032583	SRSF5	96	64.312	ENSXCOG00000001570	srsf5b	93	66.423	Xiphophorus_couchianus
ENSSSCG00000032583	SRSF5	98	65.693	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus