EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000032655 (Gene tree)
Gene ID: 100620496
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3718 bases
Position: chr12:1099337-1103054
Accession: 100620496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000054594	RRM_1	PF00076.22	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000057499	ALYREF-201	1087	XM_021066430	ENSSSCP00000054594	256 (aa)	XP_020922089	A0A287BET5

Gene Model

Click here to download ENSSSCG00000032655's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG
ssc03015	mRNA surveillance pathway	KEGG
ssc03040	Spliceosome	KEGG
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000032655	ALYREF	100	97.276	ENSG00000183684	ALYREF	97	97.276	Homo_sapiens
ENSSSCG00000032655	ALYREF	100	68.592	ENSAPOG00000018455	ALYREF	100	72.924	Acanthochromis_polyacanthus
ENSSSCG00000032655	ALYREF	73	94.652	ENSAMEG00000017463	ALYREF	74	93.478	Ailuropoda_melanoleuca
ENSSSCG00000032655	ALYREF	100	76.245	ENSACAG00000010526	ALYREF	100	76.245	Anolis_carolinensis
ENSSSCG00000032655	ALYREF	100	82.490	ENSANAG00000028229	-	78	81.323	Aotus_nancymaae
ENSSSCG00000032655	ALYREF	69	95.480	ENSANAG00000022638	-	77	93.923	Aotus_nancymaae
ENSSSCG00000032655	ALYREF	100	99.222	ENSBTAG00000008498	ALYREF	100	99.222	Bos_taurus
ENSSSCG00000032655	ALYREF	100	96.498	ENSCJAG00000039942	ALYREF	97	96.498	Callithrix_jacchus
ENSSSCG00000032655	ALYREF	100	99.222	ENSCAFG00000005877	ALYREF	100	99.222	Canis_familiaris
ENSSSCG00000032655	ALYREF	100	99.222	ENSCAFG00020009815	ALYREF	100	99.222	Canis_lupus_dingo
ENSSSCG00000032655	ALYREF	100	98.450	ENSCHIG00000017396	ALYREF	97	98.450	Capra_hircus
ENSSSCG00000032655	ALYREF	88	82.328	ENSTSYG00000002272	ALYREF	69	98.286	Carlito_syrichta
ENSSSCG00000032655	ALYREF	52	97.761	ENSCAPG00000014727	-	100	97.761	Cavia_aperea
ENSSSCG00000032655	ALYREF	100	97.276	ENSCPOG00000013710	ALYREF	100	97.276	Cavia_porcellus
ENSSSCG00000032655	ALYREF	100	75.000	ENSCCAG00000030237	-	100	73.047	Cebus_capucinus
ENSSSCG00000032655	ALYREF	100	97.276	ENSCCAG00000020578	-	97	97.276	Cebus_capucinus
ENSSSCG00000032655	ALYREF	100	98.054	ENSCATG00000033169	ALYREF	97	98.054	Cercocebus_atys
ENSSSCG00000032655	ALYREF	100	89.453	ENSCLAG00000015026	ALYREF	100	89.453	Chinchilla_lanigera
ENSSSCG00000032655	ALYREF	100	98.054	ENSCSAG00000002216	ALYREF	97	98.054	Chlorocebus_sabaeus
ENSSSCG00000032655	ALYREF	71	94.475	ENSCANG00000034056	ALYREF	95	85.027	Colobus_angolensis_palliatus
ENSSSCG00000032655	ALYREF	100	94.531	ENSCGRG00001018191	-	100	93.359	Cricetulus_griseus_chok1gshd
ENSSSCG00000032655	ALYREF	77	88.832	ENSCGRG00000015871	-	90	86.559	Cricetulus_griseus_crigri
ENSSSCG00000032655	ALYREF	72	54.639	ENSCSEG00000015438	-	98	54.455	Cynoglossus_semilaevis
ENSSSCG00000032655	ALYREF	70	97.191	ENSDNOG00000002563	ALYREF	84	91.457	Dasypus_novemcinctus
ENSSSCG00000032655	ALYREF	89	84.279	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSSSCG00000032655	ALYREF	70	96.067	ENSETEG00000016596	ALYREF	100	94.944	Echinops_telfairi
ENSSSCG00000032655	ALYREF	100	98.833	ENSEASG00005005824	ALYREF	95	98.833	Equus_asinus_asinus
ENSSSCG00000032655	ALYREF	100	98.833	ENSECAG00000018754	ALYREF	95	98.833	Equus_caballus
ENSSSCG00000032655	ALYREF	67	94.186	ENSEEUG00000010164	ALYREF	100	91.860	Erinaceus_europaeus
ENSSSCG00000032655	ALYREF	100	98.833	ENSFCAG00000022549	ALYREF	98	98.833	Felis_catus
ENSSSCG00000032655	ALYREF	83	86.854	ENSFDAG00000001213	ALYREF	93	88.293	Fukomys_damarensis
ENSSSCG00000032655	ALYREF	100	84.496	ENSGALG00000007237	ALYREF	100	84.496	Gallus_gallus
ENSSSCG00000032655	ALYREF	100	70.833	ENSGACG00000013328	ALYREF	100	72.075	Gasterosteus_aculeatus
ENSSSCG00000032655	ALYREF	100	83.908	ENSGAGG00000008536	ALYREF	100	83.525	Gopherus_agassizii
ENSSSCG00000032655	ALYREF	100	97.665	ENSGGOG00000013935	ALYREF	99	96.899	Gorilla_gorilla
ENSSSCG00000032655	ALYREF	100	96.875	ENSHGLG00000008293	ALYREF	100	96.875	Heterocephalus_glaber_female
ENSSSCG00000032655	ALYREF	80	82.667	ENSHGLG00100006949	ALYREF	85	89.500	Heterocephalus_glaber_male
ENSSSCG00000032655	ALYREF	100	68.914	ENSHCOG00000015046	ALYREF	100	70.111	Hippocampus_comes
ENSSSCG00000032655	ALYREF	100	92.607	ENSJJAG00000004134	-	100	91.829	Jaculus_jaculus
ENSSSCG00000032655	ALYREF	100	71.103	ENSLACG00000005694	ALYREF	100	73.384	Latimeria_chalumnae
ENSSSCG00000032655	ALYREF	73	96.809	ENSLAFG00000003083	ALYREF	99	95.161	Loxodonta_africana
ENSSSCG00000032655	ALYREF	100	95.331	ENSMFAG00000001394	ALYREF	97	95.331	Macaca_fascicularis
ENSSSCG00000032655	ALYREF	100	98.054	ENSMMUG00000012884	ALYREF	97	98.054	Macaca_mulatta
ENSSSCG00000032655	ALYREF	100	98.054	ENSMNEG00000043666	ALYREF	97	98.054	Macaca_nemestrina
ENSSSCG00000032655	ALYREF	73	86.316	ENSMLEG00000043353	ALYREF	87	84.737	Mandrillus_leucophaeus
ENSSSCG00000032655	ALYREF	100	80.078	ENSMAUG00000020552	-	100	77.395	Mesocricetus_auratus
ENSSSCG00000032655	ALYREF	100	97.276	ENSMICG00000017403	ALYREF	97	97.276	Microcebus_murinus
ENSSSCG00000032655	ALYREF	100	84.091	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSSSCG00000032655	ALYREF	99	96.109	ENSMODG00000003030	ALYREF	84	96.109	Monodelphis_domestica
ENSSSCG00000032655	ALYREF	100	70.182	ENSMALG00000019408	ALYREF	100	72.263	Monopterus_albus
ENSSSCG00000032655	ALYREF	100	74.219	MGP_CAROLIEiJ_G0014874	Alyref2	100	71.484	Mus_caroli
ENSSSCG00000032655	ALYREF	100	97.266	MGP_CAROLIEiJ_G0017529	Alyref	100	97.266	Mus_caroli
ENSSSCG00000032655	ALYREF	100	71.484	ENSMUSG00000060244	Alyref2	100	70.703	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000091779	Gm21293	100	54.770	Mus_musculus
ENSSSCG00000032655	ALYREF	100	61.887	ENSMUSG00000086727	4931428L18Rik	100	59.316	Mus_musculus
ENSSSCG00000032655	ALYREF	100	61.509	ENSMUSG00000117091	AC153137.1	100	58.555	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000097427	Gm6763	98	61.818	Mus_musculus
ENSSSCG00000032655	ALYREF	91	66.667	ENSMUSG00000091101	Gm4302	61	66.337	Mus_musculus
ENSSSCG00000032655	ALYREF	100	61.806	ENSMUSG00000090854	Gm4340	100	53.310	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000095022	Gm20765	100	54.770	Mus_musculus
ENSSSCG00000032655	ALYREF	100	97.266	ENSMUSG00000025134	Alyref	100	97.266	Mus_musculus
ENSSSCG00000032655	ALYREF	91	65.385	ENSMUSG00000096640	Gm4312	62	64.851	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000097878	Gm8764	98	61.818	Mus_musculus
ENSSSCG00000032655	ALYREF	91	65.385	ENSMUSG00000094314	Gm4301	62	64.851	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000097550	Gm21304	100	54.770	Mus_musculus
ENSSSCG00000032655	ALYREF	91	66.524	ENSMUSG00000112931	Gm4303	62	66.337	Mus_musculus
ENSSSCG00000032655	ALYREF	91	66.524	ENSMUSG00000112856	Gm4305	62	66.337	Mus_musculus
ENSSSCG00000032655	ALYREF	100	62.676	ENSMUSG00000094144	Gm21312	100	54.770	Mus_musculus
ENSSSCG00000032655	ALYREF	91	66.524	ENSMUSG00000096744	Gm4307	62	66.337	Mus_musculus
ENSSSCG00000032655	ALYREF	100	97.266	MGP_PahariEiJ_G0018655	-	100	97.266	Mus_pahari
ENSSSCG00000032655	ALYREF	73	97.872	MGP_PahariEiJ_G0018656	-	99	97.872	Mus_pahari
ENSSSCG00000032655	ALYREF	82	68.571	MGP_PahariEiJ_G0027255	-	80	67.327	Mus_pahari
ENSSSCG00000032655	ALYREF	82	68.571	MGP_PahariEiJ_G0027254	-	82	67.327	Mus_pahari
ENSSSCG00000032655	ALYREF	100	97.266	MGP_SPRETEiJ_G0018373	Alyref	100	97.266	Mus_spretus
ENSSSCG00000032655	ALYREF	100	71.094	MGP_SPRETEiJ_G0015679	Alyref2	100	70.312	Mus_spretus
ENSSSCG00000032655	ALYREF	70	58.150	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSSSCG00000032655	ALYREF	98	64.400	ENSMLUG00000026271	-	79	63.600	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	64.173	ENSMLUG00000025677	-	77	63.386	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	82	84.579	ENSMLUG00000009555	-	66	94.382	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	63.492	ENSMLUG00000024976	-	79	61.111	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	58.824	ENSMLUG00000022869	-	71	64.563	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	100	53.383	ENSMLUG00000023213	-	100	50.189	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	56.809	ENSMLUG00000015043	-	98	54.264	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	64.981	ENSMLUG00000002626	-	98	67.315	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	84	60.092	ENSMLUG00000028343	-	85	65.730	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	71.315	ENSMLUG00000027516	-	78	69.323	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	60.159	ENSMLUG00000024447	-	76	62.550	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	62.598	ENSMLUG00000030407	-	77	62.205	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	59.073	ENSMLUG00000024471	-	82	54.231	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	98	63.745	ENSMLUG00000027352	-	77	62.550	Myotis_lucifugus
ENSSSCG00000032655	ALYREF	100	97.665	ENSNLEG00000010313	ALYREF	97	97.665	Nomascus_leucogenys
ENSSSCG00000032655	ALYREF	82	74.286	ENSMEUG00000002210	ALYREF	92	73.810	Notamacropus_eugenii
ENSSSCG00000032655	ALYREF	52	91.791	ENSOPRG00000005551	-	52	89.552	Ochotona_princeps
ENSSSCG00000032655	ALYREF	100	96.538	ENSODEG00000008359	ALYREF	100	96.538	Octodon_degus
ENSSSCG00000032655	ALYREF	100	67.153	ENSORLG00000012331	ALYREF	100	70.073	Oryzias_latipes
ENSSSCG00000032655	ALYREF	77	90.909	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSSSCG00000032655	ALYREF	70	100.000	ENSOARG00000017932	ALYREF	67	100.000	Ovis_aries
ENSSSCG00000032655	ALYREF	100	98.833	ENSPPRG00000010829	ALYREF	98	98.833	Panthera_pardus
ENSSSCG00000032655	ALYREF	57	99.310	ENSPTIG00000006399	ALYREF	81	99.310	Panthera_tigris_altaica
ENSSSCG00000032655	ALYREF	100	97.665	ENSPTRG00000009774	ALYREF	97	97.665	Pan_troglodytes
ENSSSCG00000032655	ALYREF	100	98.054	ENSPANG00000019265	ALYREF	97	98.054	Papio_anubis
ENSSSCG00000032655	ALYREF	52	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSSSCG00000032655	ALYREF	100	97.276	ENSPPYG00000008749	ALYREF	97	97.276	Pongo_abelii
ENSSSCG00000032655	ALYREF	100	97.276	ENSPCOG00000020874	ALYREF	97	97.276	Propithecus_coquereli
ENSSSCG00000032655	ALYREF	100	80.934	ENSPVAG00000017866	ALYREF	100	80.934	Pteropus_vampyrus
ENSSSCG00000032655	ALYREF	67	97.093	ENSRNOG00000036687	Alyref	91	97.093	Rattus_norvegicus
ENSSSCG00000032655	ALYREF	71	94.475	ENSRBIG00000039651	ALYREF	74	94.475	Rhinopithecus_bieti
ENSSSCG00000032655	ALYREF	90	88.793	ENSRROG00000045364	ALYREF	83	93.365	Rhinopithecus_roxellana
ENSSSCG00000032655	ALYREF	75	93.194	ENSSHAG00000010459	ALYREF	96	95.135	Sarcophilus_harrisii
ENSSSCG00000032655	ALYREF	100	53.069	ENSSDUG00000003992	-	100	53.430	Seriola_dumerili
ENSSSCG00000032655	ALYREF	100	54.015	ENSSLDG00000005386	-	100	54.015	Seriola_lalandi_dorsalis
ENSSSCG00000032655	ALYREF	100	83.525	ENSSPUG00000004600	ALYREF	100	82.375	Sphenodon_punctatus
ENSSSCG00000032655	ALYREF	100	69.065	ENSSPAG00000011178	ALYREF	97	70.504	Stegastes_partitus
ENSSSCG00000032655	ALYREF	52	93.182	ENSTGUG00000003513	ALYREF	100	91.111	Taeniopygia_guttata
ENSSSCG00000032655	ALYREF	100	69.742	ENSTRUG00000008828	ALYREF	100	68.750	Takifugu_rubripes
ENSSSCG00000032655	ALYREF	70	98.315	ENSTBEG00000005834	ALYREF	100	98.315	Tupaia_belangeri
ENSSSCG00000032655	ALYREF	100	97.276	ENSTTRG00000012275	ALYREF	100	97.276	Tursiops_truncatus
ENSSSCG00000032655	ALYREF	69	85.311	ENSUAMG00000016931	ALYREF	66	83.051	Ursus_americanus
ENSSSCG00000032655	ALYREF	69	85.311	ENSUMAG00000016384	ALYREF	65	83.051	Ursus_maritimus
ENSSSCG00000032655	ALYREF	100	75.097	ENSXETG00000005391	alyref	100	74.031	Xenopus_tropicalis