EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000032726 (Gene tree)
Gene ID: 100511789
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 41086 bases
Position: chr16:44578784-44619869
Accession: 100511789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000038239	RRM_1	PF00076.22	5.3e-13	1	1
ENSSSCP00000052655	RRM_1	PF00076.22	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052180	SREK1-202	6559	XM_021077027	ENSSSCP00000038239	515 (aa)	XP_020932686	A0A287A2U0
ENSSSCT00000041039	SREK1-201	9102	XM_021077031	ENSSSCP00000052655	515 (aa)	XP_020932690	A0A287A2U0

Gene Model

Click here to download ENSSSCG00000032726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000032726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000032726	SREK1	100	95.922	ENSG00000153914	SREK1	100	98.684	Homo_sapiens
ENSSSCG00000032726	SREK1	100	97.087	ENSAMEG00000011327	SREK1	82	97.087	Ailuropoda_melanoleuca
ENSSSCG00000032726	SREK1	100	96.893	ENSANAG00000031358	SREK1	92	99.441	Aotus_nancymaae
ENSSSCG00000032726	SREK1	100	96.712	ENSBTAG00000007321	SREK1	82	96.712	Bos_taurus
ENSSSCG00000032726	SREK1	100	96.893	ENSCJAG00000015950	SREK1	100	96.893	Callithrix_jacchus
ENSSSCG00000032726	SREK1	100	96.505	ENSCAFG00000007560	SREK1	100	96.311	Canis_familiaris
ENSSSCG00000032726	SREK1	100	96.893	ENSTSYG00000036957	SREK1	92	96.703	Carlito_syrichta
ENSSSCG00000032726	SREK1	100	96.893	ENSCCAG00000020591	SREK1	100	96.893	Cebus_capucinus
ENSSSCG00000032726	SREK1	100	96.505	ENSCATG00000031482	SREK1	100	96.505	Cercocebus_atys
ENSSSCG00000032726	SREK1	100	96.505	ENSCLAG00000005024	SREK1	100	96.505	Chinchilla_lanigera
ENSSSCG00000032726	SREK1	100	96.311	ENSCANG00000030421	SREK1	100	96.311	Colobus_angolensis_palliatus
ENSSSCG00000032726	SREK1	100	93.592	ENSDNOG00000010327	SREK1	81	93.592	Dasypus_novemcinctus
ENSSSCG00000032726	SREK1	66	94.862	ENSETEG00000012977	SREK1	57	94.862	Echinops_telfairi
ENSSSCG00000032726	SREK1	100	97.087	ENSFCAG00000040658	-	100	96.699	Felis_catus
ENSSSCG00000032726	SREK1	100	95.922	ENSFDAG00000017844	SREK1	100	95.922	Fukomys_damarensis
ENSSSCG00000032726	SREK1	59	92.969	ENSGAGG00000006087	SREK1	72	94.118	Gopherus_agassizii
ENSSSCG00000032726	SREK1	100	96.311	ENSGGOG00000004737	SREK1	100	96.311	Gorilla_gorilla
ENSSSCG00000032726	SREK1	100	96.311	ENSHGLG00000001181	SREK1	100	96.311	Heterocephalus_glaber_female
ENSSSCG00000032726	SREK1	100	94.369	ENSHGLG00100003207	SREK1	100	93.064	Heterocephalus_glaber_male
ENSSSCG00000032726	SREK1	100	95.922	ENSSTOG00000008850	SREK1	100	96.117	Ictidomys_tridecemlineatus
ENSSSCG00000032726	SREK1	100	96.505	ENSMFAG00000039823	SREK1	100	96.505	Macaca_fascicularis
ENSSSCG00000032726	SREK1	100	96.505	ENSMMUG00000014586	SREK1	100	96.505	Macaca_mulatta
ENSSSCG00000032726	SREK1	100	96.505	ENSMNEG00000030723	SREK1	100	96.505	Macaca_nemestrina
ENSSSCG00000032726	SREK1	100	96.311	ENSMLEG00000039078	SREK1	100	96.311	Mandrillus_leucophaeus
ENSSSCG00000032726	SREK1	100	83.784	ENSMAUG00000010066	-	87	96.029	Mesocricetus_auratus
ENSSSCG00000032726	SREK1	100	97.087	ENSMICG00000034959	SREK1	100	97.087	Microcebus_murinus
ENSSSCG00000032726	SREK1	98	84.570	ENSMOCG00000001536	-	87	95.668	Microtus_ochrogaster
ENSSSCG00000032726	SREK1	100	95.922	ENSMPUG00000014736	SREK1	81	92.621	Mustela_putorius_furo
ENSSSCG00000032726	SREK1	100	96.905	ENSMLUG00000014801	SREK1	100	96.905	Myotis_lucifugus
ENSSSCG00000032726	SREK1	100	96.699	ENSNLEG00000003827	SREK1	100	96.699	Nomascus_leucogenys
ENSSSCG00000032726	SREK1	90	83.190	ENSOPRG00000012111	SREK1	50	97.080	Ochotona_princeps
ENSSSCG00000032726	SREK1	97	91.865	ENSODEG00000016450	SREK1	100	94.643	Octodon_degus
ENSSSCG00000032726	SREK1	100	91.506	ENSOCUG00000001319	SREK1	81	91.120	Oryctolagus_cuniculus
ENSSSCG00000032726	SREK1	100	93.010	ENSOGAG00000016463	SREK1	100	93.010	Otolemur_garnettii
ENSSSCG00000032726	SREK1	100	94.004	ENSOARG00000006005	SREK1	82	94.971	Ovis_aries
ENSSSCG00000032726	SREK1	100	89.515	ENSPPAG00000031605	SREK1	92	99.441	Pan_paniscus
ENSSSCG00000032726	SREK1	100	96.699	ENSPPRG00000024617	SREK1	100	93.592	Panthera_pardus
ENSSSCG00000032726	SREK1	100	96.311	ENSPTIG00000006608	SREK1	81	95.922	Panthera_tigris_altaica
ENSSSCG00000032726	SREK1	100	96.311	ENSPTRG00000016936	SREK1	100	96.311	Pan_troglodytes
ENSSSCG00000032726	SREK1	100	96.505	ENSPANG00000008953	SREK1	92	99.441	Papio_anubis
ENSSSCG00000032726	SREK1	100	80.962	ENSPEMG00000024051	-	88	96.014	Peromyscus_maniculatus_bairdii
ENSSSCG00000032726	SREK1	100	96.699	ENSPPYG00000015515	SREK1	81	96.699	Pongo_abelii
ENSSSCG00000032726	SREK1	96	89.069	ENSPCAG00000004955	SREK1	86	90.486	Procavia_capensis
ENSSSCG00000032726	SREK1	100	96.699	ENSPCOG00000026230	SREK1	92	99.441	Propithecus_coquereli
ENSSSCG00000032726	SREK1	100	95.534	ENSPVAG00000009763	SREK1	82	95.534	Pteropus_vampyrus
ENSSSCG00000032726	SREK1	100	86.019	ENSRBIG00000033818	SREK1	92	96.739	Rhinopithecus_bieti
ENSSSCG00000032726	SREK1	100	96.505	ENSRROG00000017210	SREK1	100	96.505	Rhinopithecus_roxellana
ENSSSCG00000032726	SREK1	100	96.893	ENSSBOG00000031230	SREK1	100	96.893	Saimiri_boliviensis_boliviensis
ENSSSCG00000032726	SREK1	100	79.612	ENSSHAG00000003514	SREK1	56	93.841	Sarcophilus_harrisii
ENSSSCG00000032726	SREK1	64	96.356	ENSSARG00000000795	SREK1	52	96.234	Sorex_araneus
ENSSSCG00000032726	SREK1	100	71.484	ENSTGUG00000002935	SREK1	54	91.241	Taeniopygia_guttata
ENSSSCG00000032726	SREK1	100	97.670	ENSTTRG00000009684	SREK1	89	97.670	Tursiops_truncatus
ENSSSCG00000032726	SREK1	100	95.922	ENSVPAG00000008654	SREK1	89	95.728	Vicugna_pacos