EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033144 (Gene tree)
Gene ID: 106510070
Gene Symbol: YTHDF3
Alias: FLJ31657
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 41738 bases
Position: chr4:70887102-70928839
Accession: 106510070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039459	YTH	PF04146.15	3.7e-40	1	1
ENSSSCP00000047138	YTH	PF04146.15	3.7e-40	1	1
ENSSSCP00000048507	YTH	PF04146.15	3.7e-40	1	1
ENSSSCP00000051803	YTH	PF04146.15	3.7e-40	1	1
ENSSSCP00000056797	YTH	PF04146.15	3.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000039964	YTHDF3-203	4793	-	ENSSSCP00000056797	534 (aa)	-	A0A287B6U9
ENSSSCT00000059588	YTHDF3-205	4979	XM_021089304	ENSSSCP00000051803	534 (aa)	XP_020944963	A0A287B6U9
ENSSSCT00000046274	YTHDF3-201	5163	XM_021089299	ENSSSCP00000048507	534 (aa)	XP_020944958	A0A287B6U9
ENSSSCT00000041046	YTHDF3-202	5276	XM_021089300	ENSSSCP00000047138	534 (aa)	XP_020944959	A0A287B6U9
ENSSSCT00000055631	YTHDF3-204	4766	XM_021089308	ENSSSCP00000039459	534 (aa)	XP_020944967	A0A287B6U9

Gene Model

Click here to download ENSSSCG00000033144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033144	YTHDF3	99	67.347	ENSSSCG00000027686	YTHDF2	97	65.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033144	YTHDF3	100	99.813	ENSG00000185728	YTHDF3	100	100.000	Homo_sapiens
ENSSSCG00000033144	YTHDF3	100	98.876	ENSAMEG00000018113	YTHDF3	91	98.876	Ailuropoda_melanoleuca
ENSSSCG00000033144	YTHDF3	99	69.943	ENSATEG00000011478	ythdf3	83	93.514	Anabas_testudineus
ENSSSCG00000033144	YTHDF3	99	93.928	ENSAPLG00000011329	YTHDF3	89	92.650	Anas_platyrhynchos
ENSSSCG00000033144	YTHDF3	100	92.322	ENSACAG00000016837	YTHDF3	91	91.573	Anolis_carolinensis
ENSSSCG00000033144	YTHDF3	100	99.625	ENSANAG00000037920	YTHDF3	92	99.433	Aotus_nancymaae
ENSSSCG00000033144	YTHDF3	99	81.356	ENSAMXG00000030366	ythdf3	86	78.368	Astyanax_mexicanus
ENSSSCG00000033144	YTHDF3	100	98.502	ENSBTAG00000018557	YTHDF3	98	98.502	Bos_taurus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSCJAG00000009217	YTHDF3	92	99.433	Callithrix_jacchus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSCAFG00000007215	YTHDF3	91	99.625	Canis_familiaris
ENSSSCG00000033144	YTHDF3	100	99.625	ENSCAFG00020015995	YTHDF3	100	99.625	Canis_lupus_dingo
ENSSSCG00000033144	YTHDF3	100	98.876	ENSCHIG00000026460	YTHDF3	91	98.876	Capra_hircus
ENSSSCG00000033144	YTHDF3	100	98.876	ENSTSYG00000009117	YTHDF3	92	98.677	Carlito_syrichta
ENSSSCG00000033144	YTHDF3	100	98.689	ENSCAPG00000014006	YTHDF3	93	98.689	Cavia_aperea
ENSSSCG00000033144	YTHDF3	100	99.438	ENSCPOG00000002961	YTHDF3	92	99.244	Cavia_porcellus
ENSSSCG00000033144	YTHDF3	100	99.438	ENSCCAG00000022316	YTHDF3	100	99.438	Cebus_capucinus
ENSSSCG00000033144	YTHDF3	100	99.813	ENSCATG00000038669	YTHDF3	92	99.622	Cercocebus_atys
ENSSSCG00000033144	YTHDF3	100	99.438	ENSCLAG00000002515	YTHDF3	93	99.438	Chinchilla_lanigera
ENSSSCG00000033144	YTHDF3	100	99.625	ENSCSAG00000014280	YTHDF3	91	99.625	Chlorocebus_sabaeus
ENSSSCG00000033144	YTHDF3	99	98.299	ENSCHOG00000010194	YTHDF3	91	98.299	Choloepus_hoffmanni
ENSSSCG00000033144	YTHDF3	100	92.523	ENSCPBG00000021405	YTHDF3	91	91.776	Chrysemys_picta_bellii
ENSSSCG00000033144	YTHDF3	100	99.813	ENSCANG00000032631	YTHDF3	91	99.813	Colobus_angolensis_palliatus
ENSSSCG00000033144	YTHDF3	100	98.876	ENSCGRG00001021204	Ythdf3	91	98.876	Cricetulus_griseus_chok1gshd
ENSSSCG00000033144	YTHDF3	74	67.595	ENSCGRG00000008289	-	64	73.932	Cricetulus_griseus_crigri
ENSSSCG00000033144	YTHDF3	100	98.315	ENSCGRG00000005613	-	93	98.315	Cricetulus_griseus_crigri
ENSSSCG00000033144	YTHDF3	100	77.876	ENSDARG00000057939	ythdf3	92	75.714	Danio_rerio
ENSSSCG00000033144	YTHDF3	100	98.141	ENSDNOG00000037156	YTHDF3	91	98.141	Dasypus_novemcinctus
ENSSSCG00000033144	YTHDF3	100	99.064	ENSDORG00000014699	Ythdf3	92	98.866	Dipodomys_ordii
ENSSSCG00000033144	YTHDF3	99	98.669	ENSETEG00000007144	YTHDF3	92	98.669	Echinops_telfairi
ENSSSCG00000033144	YTHDF3	100	100.000	ENSEASG00005016224	YTHDF3	91	100.000	Equus_asinus_asinus
ENSSSCG00000033144	YTHDF3	100	100.000	ENSECAG00000011093	YTHDF3	91	100.000	Equus_caballus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSFCAG00000025314	YTHDF3	91	99.625	Felis_catus
ENSSSCG00000033144	YTHDF3	100	94.007	ENSFALG00000005503	YTHDF3	100	92.884	Ficedula_albicollis
ENSSSCG00000033144	YTHDF3	100	99.438	ENSFDAG00000002735	YTHDF3	93	99.438	Fukomys_damarensis
ENSSSCG00000033144	YTHDF3	100	74.513	ENSFHEG00000016395	ythdf3	89	75.522	Fundulus_heteroclitus
ENSSSCG00000033144	YTHDF3	100	93.820	ENSGALG00000039774	YTHDF3	93	92.697	Gallus_gallus
ENSSSCG00000033144	YTHDF3	100	92.336	ENSGAGG00000003851	YTHDF3	94	91.589	Gopherus_agassizii
ENSSSCG00000033144	YTHDF3	100	99.813	ENSGGOG00000027681	YTHDF3	100	99.813	Gorilla_gorilla
ENSSSCG00000033144	YTHDF3	100	99.438	ENSHGLG00000009954	YTHDF3	92	99.244	Heterocephalus_glaber_female
ENSSSCG00000033144	YTHDF3	100	99.438	ENSHGLG00100012403	YTHDF3	93	99.438	Heterocephalus_glaber_male
ENSSSCG00000033144	YTHDF3	100	77.562	ENSIPUG00000014157	YTHDF1	92	78.456	Ictalurus_punctatus
ENSSSCG00000033144	YTHDF3	100	98.689	ENSSTOG00000027792	YTHDF3	91	98.689	Ictidomys_tridecemlineatus
ENSSSCG00000033144	YTHDF3	100	99.251	ENSJJAG00000017742	Ythdf3	93	99.251	Jaculus_jaculus
ENSSSCG00000033144	YTHDF3	100	85.206	ENSLACG00000002281	YTHDF3	90	85.206	Latimeria_chalumnae
ENSSSCG00000033144	YTHDF3	100	98.689	ENSLAFG00000016052	YTHDF3	90	98.689	Loxodonta_africana
ENSSSCG00000033144	YTHDF3	100	99.813	ENSMFAG00000043451	YTHDF3	100	99.813	Macaca_fascicularis
ENSSSCG00000033144	YTHDF3	100	99.813	ENSMMUG00000006729	YTHDF3	100	99.813	Macaca_mulatta
ENSSSCG00000033144	YTHDF3	100	99.813	ENSMNEG00000031200	YTHDF3	100	99.813	Macaca_nemestrina
ENSSSCG00000033144	YTHDF3	100	99.813	ENSMLEG00000036763	YTHDF3	91	99.813	Mandrillus_leucophaeus
ENSSSCG00000033144	YTHDF3	100	93.820	ENSMGAG00000011168	YTHDF3	91	92.697	Meleagris_gallopavo
ENSSSCG00000033144	YTHDF3	73	94.344	ENSMAUG00000012560	Ythdf3	97	93.386	Mesocricetus_auratus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSMICG00000036869	-	92	99.433	Microcebus_murinus
ENSSSCG00000033144	YTHDF3	74	78.228	ENSMICG00000009379	-	100	75.696	Microcebus_murinus
ENSSSCG00000033144	YTHDF3	100	98.315	ENSMOCG00000011947	Ythdf3	93	98.315	Microtus_ochrogaster
ENSSSCG00000033144	YTHDF3	99	70.677	ENSMMOG00000003402	ythdf3	86	89.894	Mola_mola
ENSSSCG00000033144	YTHDF3	100	97.009	ENSMODG00000008255	YTHDF3	91	97.009	Monodelphis_domestica
ENSSSCG00000033144	YTHDF3	99	70.621	ENSMALG00000000147	ythdf3	82	92.432	Monopterus_albus
ENSSSCG00000033144	YTHDF3	100	98.689	MGP_CAROLIEiJ_G0024863	Ythdf3	91	98.689	Mus_caroli
ENSSSCG00000033144	YTHDF3	100	98.689	ENSMUSG00000047213	Ythdf3	91	98.689	Mus_musculus
ENSSSCG00000033144	YTHDF3	100	98.127	MGP_PahariEiJ_G0026310	Ythdf3	91	98.127	Mus_pahari
ENSSSCG00000033144	YTHDF3	100	98.502	MGP_SPRETEiJ_G0025794	Ythdf3	96	98.482	Mus_spretus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSMPUG00000009857	YTHDF3	91	99.625	Mustela_putorius_furo
ENSSSCG00000033144	YTHDF3	99	99.245	ENSMLUG00000006541	YTHDF3	91	99.245	Myotis_lucifugus
ENSSSCG00000033144	YTHDF3	99	98.870	ENSNGAG00000018434	Ythdf3	95	98.870	Nannospalax_galili
ENSSSCG00000033144	YTHDF3	100	99.625	ENSNLEG00000003872	YTHDF3	91	99.625	Nomascus_leucogenys
ENSSSCG00000033144	YTHDF3	99	96.415	ENSMEUG00000011285	YTHDF3	91	96.415	Notamacropus_eugenii
ENSSSCG00000033144	YTHDF3	100	98.502	ENSODEG00000002033	YTHDF3	93	98.502	Octodon_degus
ENSSSCG00000033144	YTHDF3	100	92.710	ENSOANG00000005053	YTHDF3	92	90.280	Ornithorhynchus_anatinus
ENSSSCG00000033144	YTHDF3	100	99.813	ENSOCUG00000008723	YTHDF3	90	99.813	Oryctolagus_cuniculus
ENSSSCG00000033144	YTHDF3	100	75.325	ENSOMEG00000008212	ythdf3	91	74.954	Oryzias_melastigma
ENSSSCG00000033144	YTHDF3	99	98.874	ENSOGAG00000002302	YTHDF3	91	98.874	Otolemur_garnettii
ENSSSCG00000033144	YTHDF3	100	98.876	ENSOARG00000016882	YTHDF3	91	98.493	Ovis_aries
ENSSSCG00000033144	YTHDF3	100	99.438	ENSPPAG00000043483	YTHDF3	91	99.438	Pan_paniscus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSPPRG00000004665	YTHDF3	91	99.625	Panthera_pardus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSPTIG00000021537	YTHDF3	100	99.625	Panthera_tigris_altaica
ENSSSCG00000033144	YTHDF3	100	99.625	ENSPTRG00000049135	YTHDF3	92	99.433	Pan_troglodytes
ENSSSCG00000033144	YTHDF3	100	99.813	ENSPANG00000008030	YTHDF3	92	99.622	Papio_anubis
ENSSSCG00000033144	YTHDF3	97	79.423	ENSPKIG00000008298	ythdf3	88	80.192	Paramormyrops_kingsleyae
ENSSSCG00000033144	YTHDF3	100	94.579	ENSPSIG00000015861	YTHDF3	91	93.458	Pelodiscus_sinensis
ENSSSCG00000033144	YTHDF3	100	98.876	ENSPEMG00000020975	Ythdf3	93	98.876	Peromyscus_maniculatus_bairdii
ENSSSCG00000033144	YTHDF3	100	97.196	ENSPCIG00000017629	YTHDF3	91	97.196	Phascolarctos_cinereus
ENSSSCG00000033144	YTHDF3	90	100.000	ENSPPYG00000018626	YTHDF3	90	100.000	Pongo_abelii
ENSSSCG00000033144	YTHDF3	99	98.299	ENSPCAG00000016282	YTHDF3	91	98.299	Procavia_capensis
ENSSSCG00000033144	YTHDF3	100	99.625	ENSPCOG00000004856	YTHDF3	91	99.625	Propithecus_coquereli
ENSSSCG00000033144	YTHDF3	84	99.468	ENSPVAG00000002740	YTHDF3	79	99.468	Pteropus_vampyrus
ENSSSCG00000033144	YTHDF3	87	86.522	ENSPNYG00000002949	ythdf3	87	87.156	Pundamilia_nyererei
ENSSSCG00000033144	YTHDF3	100	98.502	ENSRNOG00000010084	Ythdf3	91	98.502	Rattus_norvegicus
ENSSSCG00000033144	YTHDF3	100	99.625	ENSRBIG00000036465	YTHDF3	92	99.433	Rhinopithecus_bieti
ENSSSCG00000033144	YTHDF3	100	99.438	ENSRROG00000035231	YTHDF3	92	99.244	Rhinopithecus_roxellana
ENSSSCG00000033144	YTHDF3	100	99.625	ENSSBOG00000035287	YTHDF3	91	99.625	Saimiri_boliviensis_boliviensis
ENSSSCG00000033144	YTHDF3	100	96.269	ENSSHAG00000009482	YTHDF3	91	96.269	Sarcophilus_harrisii
ENSSSCG00000033144	YTHDF3	99	99.810	ENSSARG00000007626	YTHDF3	92	99.810	Sorex_araneus
ENSSSCG00000033144	YTHDF3	99	92.817	ENSSPUG00000009390	YTHDF3	89	92.070	Sphenodon_punctatus
ENSSSCG00000033144	YTHDF3	99	93.762	ENSTGUG00000011243	YTHDF3	91	92.650	Taeniopygia_guttata
ENSSSCG00000033144	YTHDF3	79	99.289	ENSTBEG00000005747	YTHDF3	73	99.289	Tupaia_belangeri
ENSSSCG00000033144	YTHDF3	99	89.225	ENSTTRG00000014564	YTHDF3	89	88.201	Tursiops_truncatus
ENSSSCG00000033144	YTHDF3	100	99.813	ENSUAMG00000012624	YTHDF3	91	99.813	Ursus_americanus
ENSSSCG00000033144	YTHDF3	100	99.813	ENSUMAG00000014104	YTHDF3	91	99.813	Ursus_maritimus
ENSSSCG00000033144	YTHDF3	99	85.849	ENSVPAG00000008104	YTHDF3	89	84.556	Vicugna_pacos
ENSSSCG00000033144	YTHDF3	100	99.625	ENSVVUG00000018384	YTHDF3	91	99.625	Vulpes_vulpes
ENSSSCG00000033144	YTHDF3	100	88.202	ENSXETG00000021659	ythdf3	91	88.390	Xenopus_tropicalis
ENSSSCG00000033144	YTHDF3	100	73.118	ENSXCOG00000009687	ythdf3	92	75.465	Xiphophorus_couchianus
ENSSSCG00000033144	YTHDF3	100	74.468	ENSXMAG00000009698	ythdf3	92	75.651	Xiphophorus_maculatus