EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033224 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chr13:119909598-119909753
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036652	Ribosomal_L39	PF00832.20	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000066325	-	156	-	ENSSSCP00000036652	51 (aa)	-	A0A286ZYR5

Gene Model

Click here to download ENSSSCG00000033224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033224	-	98	72.000	ENSSSCG00000030928	-	100	72.000
ENSSSCG00000033224	-	69	74.286	ENSSSCG00000032958	-	100	74.286
ENSSSCG00000033224	-	100	76.923	ENSSSCG00000033110	-	100	76.923
ENSSSCG00000033224	-	100	50.980	ENSSSCG00000039696	-	100	50.980
ENSSSCG00000033224	-	100	86.275	ENSSSCG00000030849	-	100	86.275
ENSSSCG00000033224	-	100	86.275	ENSSSCG00000038467	-	100	86.275
ENSSSCG00000033224	-	71	83.333	ENSSSCG00000030728	-	86	83.333
ENSSSCG00000033224	-	100	86.275	ENSSSCG00000040703	-	100	86.275
ENSSSCG00000033224	-	100	82.353	ENSSSCG00000038385	-	69	82.353
ENSSSCG00000033224	-	92	64.706	ENSSSCG00000035694	-	71	64.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033224	-	100	88.235	ENSAMEG00000019848	-	100	88.235	Ailuropoda_melanoleuca
ENSSSCG00000033224	-	100	86.275	ENSANAG00000016046	-	100	86.275	Aotus_nancymaae
ENSSSCG00000033224	-	100	88.235	ENSANAG00000031418	-	100	88.235	Aotus_nancymaae
ENSSSCG00000033224	-	100	80.392	ENSANAG00000016436	-	100	80.392	Aotus_nancymaae
ENSSSCG00000033224	-	100	84.314	ENSCAFG00020027515	-	100	84.314	Canis_lupus_dingo
ENSSSCG00000033224	-	100	88.235	ENSCAFG00020023883	-	100	88.235	Canis_lupus_dingo
ENSSSCG00000033224	-	100	90.196	ENSCAFG00020026664	-	100	90.196	Canis_lupus_dingo
ENSSSCG00000033224	-	100	86.275	ENSCAFG00020009904	-	100	86.275	Canis_lupus_dingo
ENSSSCG00000033224	-	100	84.314	ENSCAFG00020002578	-	100	84.314	Canis_lupus_dingo
ENSSSCG00000033224	-	100	84.314	ENSTSYG00000026785	-	100	84.314	Carlito_syrichta
ENSSSCG00000033224	-	88	80.000	ENSTSYG00000026787	-	80	80.000	Carlito_syrichta
ENSSSCG00000033224	-	100	88.235	ENSCAPG00000007210	-	100	88.235	Cavia_aperea
ENSSSCG00000033224	-	100	88.235	ENSCPOG00000036636	-	100	88.235	Cavia_porcellus
ENSSSCG00000033224	-	100	86.275	ENSCLAG00000017707	-	100	86.275	Chinchilla_lanigera
ENSSSCG00000033224	-	100	86.275	ENSCLAG00000017874	-	100	86.275	Chinchilla_lanigera
ENSSSCG00000033224	-	100	82.353	ENSCGRG00001003230	Rpl39l	100	82.353	Cricetulus_griseus_chok1gshd
ENSSSCG00000033224	-	100	74.510	ENSCGRG00001008057	-	100	74.510	Cricetulus_griseus_chok1gshd
ENSSSCG00000033224	-	100	86.275	ENSCGRG00001012052	-	100	86.275	Cricetulus_griseus_chok1gshd
ENSSSCG00000033224	-	100	86.275	ENSCGRG00000019654	-	100	86.275	Cricetulus_griseus_crigri
ENSSSCG00000033224	-	100	82.353	ENSCGRG00000018615	Rpl39l	100	82.353	Cricetulus_griseus_crigri
ENSSSCG00000033224	-	100	88.235	ENSDORG00000028485	-	100	88.235	Dipodomys_ordii
ENSSSCG00000033224	-	100	86.275	ENSDORG00000027732	-	100	86.275	Dipodomys_ordii
ENSSSCG00000033224	-	100	74.510	ENSFCAG00000044333	RPL39L	100	74.510	Felis_catus
ENSSSCG00000033224	-	100	63.462	ENSFCAG00000038709	-	91	63.462	Felis_catus
ENSSSCG00000033224	-	100	86.275	ENSFDAG00000021400	-	100	86.275	Fukomys_damarensis
ENSSSCG00000033224	-	100	90.196	ENSGGOG00000036596	-	100	90.196	Gorilla_gorilla
ENSSSCG00000033224	-	88	84.444	ENSGGOG00000040312	-	63	84.444	Gorilla_gorilla
ENSSSCG00000033224	-	100	84.314	ENSHGLG00000020604	-	100	84.314	Heterocephalus_glaber_female
ENSSSCG00000033224	-	100	84.314	ENSHGLG00100011216	-	100	84.314	Heterocephalus_glaber_male
ENSSSCG00000033224	-	100	86.275	ENSSTOG00000028051	-	100	86.275	Ictidomys_tridecemlineatus
ENSSSCG00000033224	-	100	88.235	ENSSTOG00000030492	-	100	88.235	Ictidomys_tridecemlineatus
ENSSSCG00000033224	-	100	82.353	ENSJJAG00000010041	-	100	82.353	Jaculus_jaculus
ENSSSCG00000033224	-	100	84.314	ENSLAFG00000028648	-	100	84.314	Loxodonta_africana
ENSSSCG00000033224	-	100	86.275	ENSMFAG00000020492	-	100	86.275	Macaca_fascicularis
ENSSSCG00000033224	-	100	86.275	ENSMMUG00000045452	-	100	86.275	Macaca_mulatta
ENSSSCG00000033224	-	100	84.314	ENSMMUG00000038479	-	100	84.314	Macaca_mulatta
ENSSSCG00000033224	-	100	88.235	ENSMMUG00000044527	-	100	88.235	Macaca_mulatta
ENSSSCG00000033224	-	100	86.275	ENSMNEG00000001683	-	68	86.275	Macaca_nemestrina
ENSSSCG00000033224	-	100	86.275	ENSMNEG00000000126	-	100	86.275	Macaca_nemestrina
ENSSSCG00000033224	-	100	86.275	ENSMLEG00000009433	-	100	86.275	Mandrillus_leucophaeus
ENSSSCG00000033224	-	100	88.235	ENSMLEG00000003517	-	100	88.235	Mandrillus_leucophaeus
ENSSSCG00000033224	-	100	86.275	ENSMLEG00000018088	-	100	86.275	Mandrillus_leucophaeus
ENSSSCG00000033224	-	98	86.000	ENSMLEG00000000739	-	100	86.000	Mandrillus_leucophaeus
ENSSSCG00000033224	-	100	82.353	ENSMAUG00000002516	-	100	82.353	Mesocricetus_auratus
ENSSSCG00000033224	-	100	82.353	ENSMAUG00000015776	Rpl39l	100	82.353	Mesocricetus_auratus
ENSSSCG00000033224	-	100	80.392	ENSMOCG00000001545	Rpl39l	100	80.392	Microtus_ochrogaster
ENSSSCG00000033224	-	100	88.235	ENSMOCG00000002138	-	100	88.235	Microtus_ochrogaster
ENSSSCG00000033224	-	100	84.314	MGP_CAROLIEiJ_G0020438	Rpl39l	100	84.314	Mus_caroli
ENSSSCG00000033224	-	100	84.314	ENSMUSG00000039209	Rpl39l	100	84.314	Mus_musculus
ENSSSCG00000033224	-	100	84.314	MGP_SPRETEiJ_G0021332	Rpl39l	100	84.314	Mus_spretus
ENSSSCG00000033224	-	100	84.314	ENSMLUG00000015029	-	100	84.314	Myotis_lucifugus
ENSSSCG00000033224	-	100	80.392	ENSMLUG00000025012	-	100	80.392	Myotis_lucifugus
ENSSSCG00000033224	-	100	82.353	ENSNGAG00000008665	-	100	82.353	Nannospalax_galili
ENSSSCG00000033224	-	100	84.314	ENSNGAG00000012570	Rpl39l	100	84.314	Nannospalax_galili
ENSSSCG00000033224	-	88	80.000	ENSNGAG00000022494	-	94	80.000	Nannospalax_galili
ENSSSCG00000033224	-	100	86.275	ENSODEG00000020114	-	100	86.275	Octodon_degus
ENSSSCG00000033224	-	100	82.353	ENSOGAG00000024799	-	100	82.353	Otolemur_garnettii
ENSSSCG00000033224	-	100	78.431	ENSPPRG00000020779	-	100	78.431	Panthera_pardus
ENSSSCG00000033224	-	100	82.353	ENSPTIG00000006209	-	100	82.353	Panthera_tigris_altaica
ENSSSCG00000033224	-	98	86.000	ENSPANG00000030226	-	100	86.000	Papio_anubis
ENSSSCG00000033224	-	100	84.314	ENSRNOG00000032300	Rpl39l	100	84.314	Rattus_norvegicus
ENSSSCG00000033224	-	100	90.196	ENSRBIG00000010842	-	100	90.196	Rhinopithecus_bieti
ENSSSCG00000033224	-	100	90.196	ENSRROG00000037724	-	100	90.196	Rhinopithecus_roxellana
ENSSSCG00000033224	-	100	86.275	ENSRROG00000023025	-	100	86.275	Rhinopithecus_roxellana
ENSSSCG00000033224	-	88	86.667	ENSUAMG00000000067	-	96	86.667	Ursus_americanus
ENSSSCG00000033224	-	100	88.235	ENSUAMG00000020990	-	100	88.235	Ursus_americanus
ENSSSCG00000033224	-	100	88.235	ENSUMAG00000015280	-	100	88.235	Ursus_maritimus
ENSSSCG00000033224	-	100	88.235	ENSVVUG00000030147	-	100	88.235	Vulpes_vulpes
ENSSSCG00000033224	-	100	84.314	ENSVVUG00000014095	-	100	84.314	Vulpes_vulpes
ENSSSCG00000033224	-	98	84.000	ENSVVUG00000022951	-	100	84.000	Vulpes_vulpes