EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033521 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3433 bases
Position: chr4:719790-723222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037838	S10_plectin	PF03501.15	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055176	-	486	-	ENSSSCP00000037838	161 (aa)	-	A0A287A1P1

Gene Model

Click here to download ENSSSCG00000033521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033521	-	62	64.486	ENSSSCG00000001528	-	59	64.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033521	-	60	62.500	ENSAPOG00000016494	-	50	62.500	Acanthochromis_polyacanthus
ENSSSCG00000033521	-	61	76.768	ENSAPOG00000014059	-	68	76.768	Acanthochromis_polyacanthus
ENSSSCG00000033521	-	80	53.488	ENSACIG00000019704	-	66	53.488	Amphilophus_citrinellus
ENSSSCG00000033521	-	61	75.758	ENSACIG00000013806	-	55	75.758	Amphilophus_citrinellus
ENSSSCG00000033521	-	61	77.778	ENSAOCG00000011000	-	58	77.778	Amphiprion_ocellaris
ENSSSCG00000033521	-	88	52.113	ENSAOCG00000007730	-	56	67.708	Amphiprion_ocellaris
ENSSSCG00000033521	-	57	52.174	ENSAPEG00000017745	-	59	52.174	Amphiprion_percula
ENSSSCG00000033521	-	61	77.778	ENSAPEG00000019531	-	56	77.778	Amphiprion_percula
ENSSSCG00000033521	-	60	64.583	ENSATEG00000004340	-	68	64.583	Anabas_testudineus
ENSSSCG00000033521	-	76	56.098	ENSACLG00000001013	-	71	56.098	Astatotilapia_calliptera
ENSSSCG00000033521	-	61	74.747	ENSAMXG00000037914	-	60	74.747	Astyanax_mexicanus
ENSSSCG00000033521	-	94	43.871	WBGene00004479	rps-10	79	49.580	Caenorhabditis_elegans
ENSSSCG00000033521	-	61	58.586	ENSCING00000006180	-	62	58.586	Ciona_intestinalis
ENSSSCG00000033521	-	61	76.768	ENSCSEG00000009179	-	58	76.768	Cynoglossus_semilaevis
ENSSSCG00000033521	-	97	47.170	FBgn0285947	RpS10b	61	61.224	Drosophila_melanogaster
ENSSSCG00000033521	-	61	58.163	FBgn0027494	RpS10a	60	58.163	Drosophila_melanogaster
ENSSSCG00000033521	-	60	65.625	ENSEBUG00000015221	-	63	65.625	Eptatretus_burgeri
ENSSSCG00000033521	-	61	72.727	ENSFHEG00000008769	-	62	72.727	Fundulus_heteroclitus
ENSSSCG00000033521	-	61	75.510	ENSGAFG00000001335	-	50	75.510	Gambusia_affinis
ENSSSCG00000033521	-	61	74.747	ENSHBUG00000023819	-	60	74.747	Haplochromis_burtoni
ENSSSCG00000033521	-	76	56.098	ENSHBUG00000018067	-	71	56.098	Haplochromis_burtoni
ENSSSCG00000033521	-	60	73.196	ENSLBEG00000020432	-	64	73.196	Labrus_bergylta
ENSSSCG00000033521	-	75	69.919	ENSLACG00000010998	-	57	81.818	Latimeria_chalumnae
ENSSSCG00000033521	-	62	64.762	ENSMAMG00000006622	-	50	64.762	Mastacembelus_armatus
ENSSSCG00000033521	-	61	74.747	ENSMZEG00005007838	-	60	74.747	Maylandia_zebra
ENSSSCG00000033521	-	76	56.098	ENSMZEG00005026198	-	71	56.098	Maylandia_zebra
ENSSSCG00000033521	-	61	79.592	ENSMMOG00000003228	-	55	79.592	Mola_mola
ENSSSCG00000033521	-	61	69.697	ENSMMOG00000014380	-	52	69.697	Mola_mola
ENSSSCG00000033521	-	68	63.636	ENSMALG00000015614	-	68	63.636	Monopterus_albus
ENSSSCG00000033521	-	61	73.737	ENSNBRG00000008848	-	69	73.737	Neolamprologus_brichardi
ENSSSCG00000033521	-	76	56.098	ENSNBRG00000016554	-	71	56.098	Neolamprologus_brichardi
ENSSSCG00000033521	-	61	73.737	ENSPKIG00000013061	-	54	73.737	Paramormyrops_kingsleyae
ENSSSCG00000033521	-	61	74.747	ENSPMGG00000017071	-	53	74.747	Periophthalmus_magnuspinnatus
ENSSSCG00000033521	-	61	65.657	ENSPMAG00000003064	-	79	55.118	Petromyzon_marinus
ENSSSCG00000033521	-	61	74.747	ENSPMAG00000010266	-	53	74.747	Petromyzon_marinus
ENSSSCG00000033521	-	61	74.747	ENSPLAG00000012690	-	59	74.747	Poecilia_latipinna
ENSSSCG00000033521	-	61	73.737	ENSPNYG00000012665	-	60	73.737	Pundamilia_nyererei
ENSSSCG00000033521	-	76	55.285	ENSPNYG00000006286	-	71	55.285	Pundamilia_nyererei
ENSSSCG00000033521	-	61	67.677	ENSPNAG00000021290	-	56	67.677	Pygocentrus_nattereri
ENSSSCG00000033521	-	61	42.424	YMR230W	RPS10B	92	42.424	Saccharomyces_cerevisiae
ENSSSCG00000033521	-	61	42.424	YOR293W	RPS10A	92	42.424	Saccharomyces_cerevisiae
ENSSSCG00000033521	-	61	74.747	ENSSFOG00015009603	-	50	74.747	Scleropages_formosus
ENSSSCG00000033521	-	88	57.343	ENSSFOG00015012004	-	68	64.228	Scleropages_formosus
ENSSSCG00000033521	-	61	76.768	ENSSDUG00000010997	-	59	76.768	Seriola_dumerili
ENSSSCG00000033521	-	61	67.677	ENSSDUG00000011052	-	63	67.677	Seriola_dumerili
ENSSSCG00000033521	-	61	66.667	ENSSLDG00000016257	-	56	66.667	Seriola_lalandi_dorsalis
ENSSSCG00000033521	-	61	76.768	ENSSLDG00000012473	-	63	76.768	Seriola_lalandi_dorsalis
ENSSSCG00000033521	-	61	77.778	ENSSPAG00000015615	-	77	77.778	Stegastes_partitus
ENSSSCG00000033521	-	69	54.472	ENSSPAG00000012512	-	64	54.472	Stegastes_partitus
ENSSSCG00000033521	-	58	79.787	ENSXETG00000032983	-	52	80.808	Xenopus_tropicalis
ENSSSCG00000033521	-	61	74.747	ENSXCOG00000016917	-	61	74.747	Xiphophorus_couchianus
ENSSSCG00000033521	-	58	74.194	ENSXMAG00000029046	-	54	74.194	Xiphophorus_maculatus