EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033591 (Gene tree)
Gene ID: 110260954
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 147443 bases
Position: chr6:31832493-31979935
Accession: 110260954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000059167	ResIII	PF04851.15	8.4e-06	1	1
ENSSSCP00000059167	BRK	PF07533.16	8.2e-31	1	2
ENSSSCP00000059167	BRK	PF07533.16	8.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000040052	CHD9-201	8571	XM_021094174	ENSSSCP00000059167	2856 (aa)	XP_020949833	A0A287BSL8

Gene Model

Click here to download ENSSSCG00000033591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033591's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033591	CHD9	90	56.878	ENSSSCG00000006231	CHD7	72	53.808
ENSSSCG00000033591	CHD9	74	57.447	ENSSSCG00000002127	CHD8	76	67.703
ENSSSCG00000033591	CHD9	70	65.852	ENSSSCG00000007360	CHD6	79	62.340

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033591	CHD9	100	95.086	ENSAMEG00000016232	CHD9	100	94.914	Ailuropoda_melanoleuca
ENSSSCG00000033591	CHD9	57	73.224	ENSACIG00000004097	chd9	98	59.353	Amphilophus_citrinellus
ENSSSCG00000033591	CHD9	57	76.090	ENSATEG00000002748	chd9	99	61.398	Anabas_testudineus
ENSSSCG00000033591	CHD9	99	83.717	ENSAPLG00000002826	CHD9	99	83.275	Anas_platyrhynchos
ENSSSCG00000033591	CHD9	61	74.954	ENSAMXG00000005652	chd9	68	74.376	Astyanax_mexicanus
ENSSSCG00000033591	CHD9	100	95.222	ENSBTAG00000002287	CHD9	100	95.050	Bos_taurus
ENSSSCG00000033591	CHD9	100	95.084	ENSCAFG00000009699	CHD9	100	95.084	Canis_familiaris
ENSSSCG00000033591	CHD9	100	95.084	ENSCAFG00020002879	CHD9	98	99.267	Canis_lupus_dingo
ENSSSCG00000033591	CHD9	100	95.905	ENSCHIG00000021000	CHD9	100	95.905	Capra_hircus
ENSSSCG00000033591	CHD9	75	96.159	ENSTSYG00000007693	CHD9	98	98.168	Carlito_syrichta
ENSSSCG00000033591	CHD9	92	95.070	ENSCAPG00000011604	CHD9	96	79.916	Cavia_aperea
ENSSSCG00000033591	CHD9	75	91.760	ENSCPOG00000036544	CHD9	99	89.611	Cavia_porcellus
ENSSSCG00000033591	CHD9	75	95.740	ENSCLAG00000007137	CHD9	99	97.110	Chinchilla_lanigera
ENSSSCG00000033591	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSSSCG00000033591	CHD9	95	84.449	ENSCPBG00000012459	CHD9	99	90.870	Chrysemys_picta_bellii
ENSSSCG00000033591	CHD9	75	92.743	ENSCGRG00001016150	Chd9	99	90.014	Cricetulus_griseus_chok1gshd
ENSSSCG00000033591	CHD9	75	92.743	ENSCGRG00000012850	Chd9	99	95.607	Cricetulus_griseus_crigri
ENSSSCG00000033591	CHD9	62	75.511	ENSCVAG00000016195	chd9	99	59.987	Cyprinodon_variegatus
ENSSSCG00000033591	CHD9	82	97.895	ENSETEG00000009565	CHD9	80	97.895	Echinops_telfairi
ENSSSCG00000033591	CHD9	90	95.024	ENSEASG00005014832	CHD9	99	95.362	Equus_asinus_asinus
ENSSSCG00000033591	CHD9	100	93.230	ENSECAG00000011505	CHD9	100	93.230	Equus_caballus
ENSSSCG00000033591	CHD9	71	98.095	ENSEEUG00000014515	CHD9	73	98.095	Erinaceus_europaeus
ENSSSCG00000033591	CHD9	77	72.648	ENSELUG00000006031	chd9	83	73.567	Esox_lucius
ENSSSCG00000033591	CHD9	75	95.131	ENSFDAG00000021037	CHD9	99	91.964	Fukomys_damarensis
ENSSSCG00000033591	CHD9	56	75.684	ENSFHEG00000006068	chd9	99	67.720	Fundulus_heteroclitus
ENSSSCG00000033591	CHD9	68	75.911	ENSGMOG00000006040	chd9	83	76.030	Gadus_morhua
ENSSSCG00000033591	CHD9	61	75.650	ENSGAFG00000010014	chd9	91	65.099	Gambusia_affinis
ENSSSCG00000033591	CHD9	61	75.713	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSSSCG00000033591	CHD9	75	95.459	ENSHGLG00000014938	CHD9	99	97.110	Heterocephalus_glaber_female
ENSSSCG00000033591	CHD9	67	69.827	ENSHCOG00000000937	chd9	97	66.999	Hippocampus_comes
ENSSSCG00000033591	CHD9	80	68.832	ENSIPUG00000016448	chd9	98	73.358	Ictalurus_punctatus
ENSSSCG00000033591	CHD9	62	75.195	ENSKMAG00000016784	chd9	94	69.067	Kryptolebias_marmoratus
ENSSSCG00000033591	CHD9	69	64.600	ENSLBEG00000012077	chd9	98	66.680	Labrus_bergylta
ENSSSCG00000033591	CHD9	87	72.328	ENSLOCG00000007225	chd9	95	79.486	Lepisosteus_oculatus
ENSSSCG00000033591	CHD9	75	95.087	ENSLAFG00000015374	CHD9	99	91.938	Loxodonta_africana
ENSSSCG00000033591	CHD9	81	94.185	ENSMFAG00000041354	CHD9	98	98.168	Macaca_fascicularis
ENSSSCG00000033591	CHD9	57	75.636	ENSMAMG00000003909	chd9	99	59.602	Mastacembelus_armatus
ENSSSCG00000033591	CHD9	57	76.396	ENSMZEG00005006581	chd9	97	68.816	Maylandia_zebra
ENSSSCG00000033591	CHD9	95	79.177	ENSMGAG00000004642	CHD9	72	80.644	Meleagris_gallopavo
ENSSSCG00000033591	CHD9	75	96.582	ENSMICG00000016679	CHD9	98	97.436	Microcebus_murinus
ENSSSCG00000033591	CHD9	73	84.140	ENSMODG00000013142	-	99	84.092	Monodelphis_domestica
ENSSSCG00000033591	CHD9	61	75.121	ENSMALG00000013306	chd9	99	59.893	Monopterus_albus
ENSSSCG00000033591	CHD9	75	91.437	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSSSCG00000033591	CHD9	98	91.296	MGP_PahariEiJ_G0022964	Chd9	99	86.889	Mus_pahari
ENSSSCG00000033591	CHD9	75	91.437	MGP_SPRETEiJ_G0032483	Chd9	99	88.429	Mus_spretus
ENSSSCG00000033591	CHD9	100	94.842	ENSMPUG00000003285	CHD9	100	94.842	Mustela_putorius_furo
ENSSSCG00000033591	CHD9	75	95.927	ENSMLUG00000004456	CHD9	99	92.380	Myotis_lucifugus
ENSSSCG00000033591	CHD9	82	74.742	ENSNBRG00000009423	chd9	99	60.382	Neolamprologus_brichardi
ENSSSCG00000033591	CHD9	52	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSSSCG00000033591	CHD9	60	97.654	ENSOPRG00000011168	CHD9	85	97.654	Ochotona_princeps
ENSSSCG00000033591	CHD9	75	95.133	ENSODEG00000004466	CHD9	99	91.967	Octodon_degus
ENSSSCG00000033591	CHD9	58	96.972	ENSOCUG00000001016	CHD9	98	93.134	Oryctolagus_cuniculus
ENSSSCG00000033591	CHD9	57	75.152	ENSORLG00000013810	chd9	98	66.680	Oryzias_latipes
ENSSSCG00000033591	CHD9	70	75.534	ENSORLG00020020665	chd9	99	60.087	Oryzias_latipes_hni
ENSSSCG00000033591	CHD9	100	94.986	ENSOARG00000017664	CHD9	100	94.815	Ovis_aries
ENSSSCG00000033591	CHD9	83	94.351	ENSPANG00000019307	CHD9	98	98.168	Papio_anubis
ENSSSCG00000033591	CHD9	99	57.925	ENSPKIG00000025401	-	71	62.265	Paramormyrops_kingsleyae
ENSSSCG00000033591	CHD9	74	64.495	ENSPKIG00000021876	chd9	98	68.400	Paramormyrops_kingsleyae
ENSSSCG00000033591	CHD9	65	84.429	ENSPSIG00000008099	CHD9	99	84.429	Pelodiscus_sinensis
ENSSSCG00000033591	CHD9	59	56.686	ENSPMAG00000006035	-	92	67.014	Petromyzon_marinus
ENSSSCG00000033591	CHD9	83	85.974	ENSPCIG00000017215	CHD9	99	87.632	Phascolarctos_cinereus
ENSSSCG00000033591	CHD9	61	75.774	ENSPFOG00000015839	chd9	96	65.147	Poecilia_formosa
ENSSSCG00000033591	CHD9	61	75.650	ENSPLAG00000011118	chd9	98	67.820	Poecilia_latipinna
ENSSSCG00000033591	CHD9	61	75.351	ENSPMEG00000015106	chd9	95	65.473	Poecilia_mexicana
ENSSSCG00000033591	CHD9	61	76.153	ENSPREG00000006473	chd9	99	60.067	Poecilia_reticulata
ENSSSCG00000033591	CHD9	67	96.296	ENSPCAG00000007564	CHD9	74	96.296	Procavia_capensis
ENSSSCG00000033591	CHD9	100	92.847	ENSPCOG00000028433	CHD9	98	98.535	Propithecus_coquereli
ENSSSCG00000033591	CHD9	85	92.836	ENSPVAG00000015617	CHD9	84	92.857	Pteropus_vampyrus
ENSSSCG00000033591	CHD9	67	69.565	ENSPNAG00000024141	chd9	99	67.319	Pygocentrus_nattereri
ENSSSCG00000033591	CHD9	55	89.879	ENSRNOG00000049302	Chd9	99	89.879	Rattus_norvegicus
ENSSSCG00000033591	CHD9	83	94.307	ENSRBIG00000035553	CHD9	98	98.168	Rhinopithecus_bieti
ENSSSCG00000033591	CHD9	82	94.338	ENSRROG00000033278	CHD9	98	98.168	Rhinopithecus_roxellana
ENSSSCG00000033591	CHD9	75	63.774	ENSSFOG00015020209	chd9	99	67.626	Scleropages_formosus
ENSSSCG00000033591	CHD9	99	60.489	ENSSFOG00015001327	chd9	95	68.837	Scleropages_formosus
ENSSSCG00000033591	CHD9	52	77.377	ENSSMAG00000008953	chd9	97	67.392	Scophthalmus_maximus
ENSSSCG00000033591	CHD9	61	75.423	ENSSDUG00000006139	chd9	98	67.492	Seriola_dumerili
ENSSSCG00000033591	CHD9	61	75.483	ENSSLDG00000017818	chd9	98	67.147	Seriola_lalandi_dorsalis
ENSSSCG00000033591	CHD9	55	93.060	ENSSARG00000010632	CHD9	53	93.288	Sorex_araneus
ENSSSCG00000033591	CHD9	62	75.625	ENSTRUG00000009125	chd9	99	59.524	Takifugu_rubripes
ENSSSCG00000033591	CHD9	56	81.951	ENSTNIG00000003825	chd9	87	81.951	Tetraodon_nigroviridis
ENSSSCG00000033591	CHD9	67	96.847	ENSTBEG00000016052	-	81	96.818	Tupaia_belangeri
ENSSSCG00000033591	CHD9	90	94.457	ENSTTRG00000012674	CHD9	90	94.457	Tursiops_truncatus
ENSSSCG00000033591	CHD9	75	94.452	ENSUMAG00000004043	CHD9	99	96.614	Ursus_maritimus
ENSSSCG00000033591	CHD9	72	96.466	ENSVPAG00000001374	CHD9	97	96.466	Vicugna_pacos
ENSSSCG00000033591	CHD9	100	95.119	ENSVVUG00000019435	CHD9	100	95.119	Vulpes_vulpes
ENSSSCG00000033591	CHD9	70	76.482	ENSXETG00000000349	chd9	96	76.482	Xenopus_tropicalis
ENSSSCG00000033591	CHD9	61	75.650	ENSXMAG00000016192	chd9	99	59.558	Xiphophorus_maculatus