EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033617 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 2362 bases
Position: chr1:168427513-168429874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057753	Ribosomal_L16	PF00252.18	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000048834	-	549	-	ENSSSCP00000057753	182 (aa)	-	A0A287BNK6

Gene Model

Click here to download ENSSSCG00000033617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033617	-	77	65.248	ENSSSCG00000034788	-	85	65.248
ENSSSCG00000033617	-	57	86.538	ENSSSCG00000035997	RPL10	64	86.538
ENSSSCG00000033617	-	92	57.310	ENSSSCG00000039816	-	73	68.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033617	-	57	84.615	ENSG00000147403	RPL10	64	84.615	Homo_sapiens
ENSSSCG00000033617	-	67	64.754	ENSAPOG00000000217	rpl10	59	73.333	Acanthochromis_polyacanthus
ENSSSCG00000033617	-	59	55.046	ENSAMEG00000007942	-	72	55.046	Ailuropoda_melanoleuca
ENSSSCG00000033617	-	57	75.000	ENSACIG00000005751	rpl10	63	75.000	Amphilophus_citrinellus
ENSSSCG00000033617	-	57	76.923	ENSANAG00000037907	-	56	76.923	Aotus_nancymaae
ENSSSCG00000033617	-	57	85.577	ENSANAG00000036053	-	58	85.577	Aotus_nancymaae
ENSSSCG00000033617	-	57	75.000	ENSACLG00000000472	rpl10	58	75.000	Astatotilapia_calliptera
ENSSSCG00000033617	-	57	74.038	ENSAMXG00000030047	rpl10	58	74.038	Astyanax_mexicanus
ENSSSCG00000033617	-	57	81.731	ENSBTAG00000000609	-	64	81.731	Bos_taurus
ENSSSCG00000033617	-	57	85.577	ENSCJAG00000011822	-	58	85.577	Callithrix_jacchus
ENSSSCG00000033617	-	57	85.577	ENSCAFG00020009114	-	58	85.577	Canis_lupus_dingo
ENSSSCG00000033617	-	57	68.269	ENSCHIG00000020953	-	57	68.269	Capra_hircus
ENSSSCG00000033617	-	57	85.577	ENSTSYG00000004067	-	58	85.577	Carlito_syrichta
ENSSSCG00000033617	-	57	85.577	ENSCAPG00000000072	-	50	85.577	Cavia_aperea
ENSSSCG00000033617	-	57	85.577	ENSCPOG00000002355	-	50	85.577	Cavia_porcellus
ENSSSCG00000033617	-	57	75.962	ENSCCAG00000023080	-	52	75.962	Cebus_capucinus
ENSSSCG00000033617	-	87	58.750	ENSCCAG00000021256	-	90	58.750	Cebus_capucinus
ENSSSCG00000033617	-	57	85.577	ENSCCAG00000024992	-	58	85.577	Cebus_capucinus
ENSSSCG00000033617	-	57	69.231	ENSCCAG00000024507	-	56	69.231	Cebus_capucinus
ENSSSCG00000033617	-	57	85.577	ENSCATG00000030970	-	58	85.577	Cercocebus_atys
ENSSSCG00000033617	-	57	80.769	ENSCPBG00000015988	-	63	80.769	Chrysemys_picta_bellii
ENSSSCG00000033617	-	57	85.577	ENSCANG00000032226	-	58	85.577	Colobus_angolensis_palliatus
ENSSSCG00000033617	-	57	72.115	ENSCANG00000040013	-	50	72.115	Colobus_angolensis_palliatus
ENSSSCG00000033617	-	92	58.683	ENSCGRG00001014291	-	86	58.788	Cricetulus_griseus_chok1gshd
ENSSSCG00000033617	-	62	72.321	ENSCGRG00000019314	-	51	72.321	Cricetulus_griseus_crigri
ENSSSCG00000033617	-	87	58.896	ENSCGRG00000012867	-	86	58.896	Cricetulus_griseus_crigri
ENSSSCG00000033617	-	57	83.654	ENSCGRG00000001915	-	50	83.654	Cricetulus_griseus_crigri
ENSSSCG00000033617	-	57	78.846	ENSCGRG00000002922	Rpl10l	55	78.846	Cricetulus_griseus_crigri
ENSSSCG00000033617	-	57	74.038	ENSCSEG00000003267	rpl10	69	74.038	Cynoglossus_semilaevis
ENSSSCG00000033617	-	57	74.038	ENSCVAG00000011424	rpl10	58	74.038	Cyprinodon_variegatus
ENSSSCG00000033617	-	56	75.490	ENSDARG00000025581	rpl10	63	75.490	Danio_rerio
ENSSSCG00000033617	-	53	72.165	ENSDNOG00000039117	-	99	72.165	Dasypus_novemcinctus
ENSSSCG00000033617	-	57	85.577	ENSETEG00000001712	-	69	85.577	Echinops_telfairi
ENSSSCG00000033617	-	57	85.577	ENSEASG00005018463	-	64	85.577	Equus_asinus_asinus
ENSSSCG00000033617	-	57	80.769	ENSEASG00005000897	-	70	80.769	Equus_asinus_asinus
ENSSSCG00000033617	-	57	79.808	ENSECAG00000038999	-	70	79.808	Equus_caballus
ENSSSCG00000033617	-	57	67.308	ENSELUG00000020689	rpl10	58	67.308	Esox_lucius
ENSSSCG00000033617	-	57	85.577	ENSFCAG00000011395	-	58	85.577	Felis_catus
ENSSSCG00000033617	-	57	74.038	ENSFHEG00000011386	rpl10	58	74.038	Fundulus_heteroclitus
ENSSSCG00000033617	-	57	73.077	ENSGAFG00000015698	rpl10	58	73.077	Gambusia_affinis
ENSSSCG00000033617	-	57	80.769	ENSGAGG00000005518	-	51	80.769	Gopherus_agassizii
ENSSSCG00000033617	-	57	85.577	ENSGGOG00000000131	-	58	85.577	Gorilla_gorilla
ENSSSCG00000033617	-	53	83.505	ENSGGOG00000043721	-	60	83.505	Gorilla_gorilla
ENSSSCG00000033617	-	55	76.000	ENSGGOG00000042131	-	60	76.000	Gorilla_gorilla
ENSSSCG00000033617	-	57	75.000	ENSHBUG00000002074	rpl10	58	75.000	Haplochromis_burtoni
ENSSSCG00000033617	-	57	77.885	ENSHGLG00000017540	-	50	77.885	Heterocephalus_glaber_female
ENSSSCG00000033617	-	92	55.689	ENSHGLG00000002608	-	70	64.029	Heterocephalus_glaber_female
ENSSSCG00000033617	-	92	55.689	ENSHGLG00100001759	-	70	64.029	Heterocephalus_glaber_male
ENSSSCG00000033617	-	57	77.885	ENSHGLG00100006076	-	50	77.885	Heterocephalus_glaber_male
ENSSSCG00000033617	-	69	64.800	ENSHGLG00100012361	-	57	73.077	Heterocephalus_glaber_male
ENSSSCG00000033617	-	57	72.115	ENSIPUG00000019491	rl10	58	72.115	Ictalurus_punctatus
ENSSSCG00000033617	-	55	74.000	ENSSTOG00000032177	-	53	74.000	Ictidomys_tridecemlineatus
ENSSSCG00000033617	-	57	73.077	ENSKMAG00000005017	rpl10	58	73.077	Kryptolebias_marmoratus
ENSSSCG00000033617	-	57	70.192	ENSLBEG00000016776	rpl10	55	70.192	Labrus_bergylta
ENSSSCG00000033617	-	57	85.577	ENSMFAG00000040824	RPL10	58	85.577	Macaca_fascicularis
ENSSSCG00000033617	-	63	73.913	ENSMMUG00000011609	-	54	73.913	Macaca_mulatta
ENSSSCG00000033617	-	57	85.577	ENSMMUG00000005494	RPL10	59	87.037	Macaca_mulatta
ENSSSCG00000033617	-	57	83.654	ENSMMUG00000001925	-	59	83.654	Macaca_mulatta
ENSSSCG00000033617	-	57	71.845	ENSMNEG00000035514	-	86	52.727	Macaca_nemestrina
ENSSSCG00000033617	-	57	85.577	ENSMNEG00000038094	-	58	85.577	Macaca_nemestrina
ENSSSCG00000033617	-	57	74.038	ENSMAMG00000015455	rpl10	58	74.038	Mastacembelus_armatus
ENSSSCG00000033617	-	57	75.000	ENSMZEG00005026532	rpl10	58	75.000	Maylandia_zebra
ENSSSCG00000033617	-	55	50.476	ENSMZEG00005028041	-	60	50.476	Maylandia_zebra
ENSSSCG00000033617	-	81	48.538	ENSMAUG00000020276	-	84	48.538	Mesocricetus_auratus
ENSSSCG00000033617	-	57	85.577	ENSMICG00000033705	-	58	85.577	Microcebus_murinus
ENSSSCG00000033617	-	57	77.885	ENSMOCG00000014966	-	62	77.885	Microtus_ochrogaster
ENSSSCG00000033617	-	87	62.264	ENSMOCG00000009835	-	86	62.264	Microtus_ochrogaster
ENSSSCG00000033617	-	57	74.038	ENSMMOG00000017347	rpl10	58	74.038	Mola_mola
ENSSSCG00000033617	-	57	74.038	ENSMALG00000002559	rpl10	58	74.038	Monopterus_albus
ENSSSCG00000033617	-	82	54.430	ENSNGAG00000019141	-	72	54.430	Nannospalax_galili
ENSSSCG00000033617	-	57	64.423	ENSNGAG00000019291	-	63	64.423	Nannospalax_galili
ENSSSCG00000033617	-	58	73.394	ENSNGAG00000004971	-	51	73.394	Nannospalax_galili
ENSSSCG00000033617	-	57	75.000	ENSNBRG00000004192	rpl10	58	75.000	Neolamprologus_brichardi
ENSSSCG00000033617	-	54	75.510	ENSNLEG00000027552	-	52	75.510	Nomascus_leucogenys
ENSSSCG00000033617	-	57	79.808	ENSNLEG00000035527	-	61	79.808	Nomascus_leucogenys
ENSSSCG00000033617	-	57	75.728	ENSNLEG00000032289	-	67	75.728	Nomascus_leucogenys
ENSSSCG00000033617	-	57	85.577	ENSNLEG00000028143	-	64	85.577	Nomascus_leucogenys
ENSSSCG00000033617	-	57	82.692	ENSMEUG00000013163	-	50	82.692	Notamacropus_eugenii
ENSSSCG00000033617	-	57	79.808	ENSODEG00000012263	-	55	79.808	Octodon_degus
ENSSSCG00000033617	-	57	71.154	ENSORLG00020021143	rpl10	57	71.154	Oryzias_latipes_hni
ENSSSCG00000033617	-	57	72.115	ENSORLG00015015821	rpl10	57	72.115	Oryzias_latipes_hsok
ENSSSCG00000033617	-	57	73.077	ENSOMEG00000011751	rpl10	58	73.077	Oryzias_melastigma
ENSSSCG00000033617	-	56	83.333	ENSOARG00000016318	-	100	83.333	Ovis_aries
ENSSSCG00000033617	-	57	85.577	ENSPPAG00000034160	-	58	85.577	Pan_paniscus
ENSSSCG00000033617	-	62	67.257	ENSPPAG00000020443	-	66	67.257	Pan_paniscus
ENSSSCG00000033617	-	54	71.429	ENSPPAG00000031165	-	52	71.429	Pan_paniscus
ENSSSCG00000033617	-	57	70.192	ENSPPRG00000006827	-	63	70.192	Panthera_pardus
ENSSSCG00000033617	-	57	85.577	ENSPPRG00000021464	-	58	85.577	Panthera_pardus
ENSSSCG00000033617	-	57	85.577	ENSPTIG00000005599	-	58	85.577	Panthera_tigris_altaica
ENSSSCG00000033617	-	62	68.142	ENSPTRG00000043110	-	54	68.142	Pan_troglodytes
ENSSSCG00000033617	-	57	85.577	ENSPTRG00000043378	RPL10	58	85.577	Pan_troglodytes
ENSSSCG00000033617	-	91	54.651	ENSPANG00000032366	-	50	80.769	Papio_anubis
ENSSSCG00000033617	-	55	80.000	ENSPANG00000029439	-	58	80.000	Papio_anubis
ENSSSCG00000033617	-	55	83.000	ENSPANG00000017636	-	61	83.000	Papio_anubis
ENSSSCG00000033617	-	57	85.577	ENSPANG00000008309	RPL10	58	85.577	Papio_anubis
ENSSSCG00000033617	-	57	75.962	ENSPKIG00000006371	rpl10	58	75.962	Paramormyrops_kingsleyae
ENSSSCG00000033617	-	57	80.769	ENSPSIG00000010987	-	63	80.769	Pelodiscus_sinensis
ENSSSCG00000033617	-	57	75.000	ENSPMGG00000013904	rpl10	58	75.000	Periophthalmus_magnuspinnatus
ENSSSCG00000033617	-	57	78.846	ENSPCIG00000030588	-	58	78.846	Phascolarctos_cinereus
ENSSSCG00000033617	-	57	82.692	ENSPCIG00000026904	-	58	82.692	Phascolarctos_cinereus
ENSSSCG00000033617	-	57	74.038	ENSPLAG00000017727	rpl10	58	74.038	Poecilia_latipinna
ENSSSCG00000033617	-	57	74.038	ENSPMEG00000023368	rpl10	58	74.038	Poecilia_mexicana
ENSSSCG00000033617	-	57	73.077	ENSPREG00000006075	rpl10	58	73.077	Poecilia_reticulata
ENSSSCG00000033617	-	57	85.577	ENSPCOG00000027122	-	58	85.577	Propithecus_coquereli
ENSSSCG00000033617	-	57	74.038	ENSPNYG00000024106	rpl10	58	74.038	Pundamilia_nyererei
ENSSSCG00000033617	-	57	74.038	ENSPNAG00000014427	rpl10	58	74.038	Pygocentrus_nattereri
ENSSSCG00000033617	-	57	60.577	ENSRBIG00000037895	-	58	60.577	Rhinopithecus_bieti
ENSSSCG00000033617	-	57	85.577	ENSRBIG00000042996	-	58	85.577	Rhinopithecus_bieti
ENSSSCG00000033617	-	57	85.577	ENSRROG00000019247	-	58	85.577	Rhinopithecus_roxellana
ENSSSCG00000033617	-	57	61.538	ENSRROG00000029223	-	58	61.538	Rhinopithecus_roxellana
ENSSSCG00000033617	-	60	72.477	ENSRROG00000034848	-	55	72.477	Rhinopithecus_roxellana
ENSSSCG00000033617	-	57	85.577	ENSSBOG00000025724	-	55	85.577	Saimiri_boliviensis_boliviensis
ENSSSCG00000033617	-	57	81.731	ENSSBOG00000034221	-	60	81.731	Saimiri_boliviensis_boliviensis
ENSSSCG00000033617	-	57	74.038	ENSSFOG00015000901	-	58	74.038	Scleropages_formosus
ENSSSCG00000033617	-	57	75.962	ENSSFOG00015011227	rpl10	58	75.962	Scleropages_formosus
ENSSSCG00000033617	-	57	75.000	ENSSMAG00000001919	rpl10	58	75.000	Scophthalmus_maximus
ENSSSCG00000033617	-	57	73.077	ENSSDUG00000013659	rpl10	58	73.077	Seriola_dumerili
ENSSSCG00000033617	-	54	50.505	ENSSLDG00000006577	-	56	50.505	Seriola_lalandi_dorsalis
ENSSSCG00000033617	-	57	73.077	ENSSLDG00000000776	rpl10	58	73.077	Seriola_lalandi_dorsalis
ENSSSCG00000033617	-	57	82.524	ENSSPUG00000017991	RPL10L	63	81.731	Sphenodon_punctatus
ENSSSCG00000033617	-	57	73.077	ENSSPAG00000000497	rpl10	58	73.077	Stegastes_partitus
ENSSSCG00000033617	-	57	73.077	ENSTRUG00000023282	rpl10	58	73.077	Takifugu_rubripes
ENSSSCG00000033617	-	57	80.952	ENSVVUG00000029559	-	59	80.952	Vulpes_vulpes
ENSSSCG00000033617	-	57	73.077	ENSXCOG00000002144	rpl10	58	73.077	Xiphophorus_couchianus
ENSSSCG00000033617	-	57	73.077	ENSXMAG00000004788	rpl10	58	73.077	Xiphophorus_maculatus