EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033638 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 479 bases
Position: chrX:39258413-39258891
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000044250	RRM_1	PF00076.22	1.5e-18	1	2
ENSSSCP00000044250	RRM_1	PF00076.22	1.5e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000065855	-	456	-	ENSSSCP00000044250	151 (aa)	-	A0A287AK20

Gene Model

Click here to download ENSSSCG00000033638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033638	-	95	66.216	ENSSSCG00000032167	-	74	66.216
ENSSSCG00000033638	-	91	54.930	ENSSSCG00000040194	PABPC5	53	55.479
ENSSSCG00000033638	-	95	66.216	ENSSSCG00000036336	-	74	66.216
ENSSSCG00000033638	-	96	73.826	ENSSSCG00000006063	PABPC1	54	73.826
ENSSSCG00000033638	-	94	65.306	ENSSSCG00000007382	PABPC1L	51	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033638	-	96	73.826	ENSG00000070756	PABPC1	100	75.229	Homo_sapiens
ENSSSCG00000033638	-	84	78.495	ENSAPLG00000001129	PABPC1	50	78.495	Anas_platyrhynchos
ENSSSCG00000033638	-	95	73.826	ENSANAG00000027730	-	54	73.826	Aotus_nancymaae
ENSSSCG00000033638	-	95	67.114	ENSANAG00000019222	-	63	67.114	Aotus_nancymaae
ENSSSCG00000033638	-	95	73.154	ENSCJAG00000041162	-	58	73.154	Callithrix_jacchus
ENSSSCG00000033638	-	95	67.785	ENSCJAG00000045282	-	56	67.785	Callithrix_jacchus
ENSSSCG00000033638	-	96	73.826	ENSCAFG00000000567	PABPC1	55	73.826	Canis_familiaris
ENSSSCG00000033638	-	96	73.826	ENSCHIG00000023714	PABPC1	73	73.826	Capra_hircus
ENSSSCG00000033638	-	95	69.128	ENSTSYG00000033737	-	58	69.128	Carlito_syrichta
ENSSSCG00000033638	-	95	73.826	ENSCCAG00000037733	-	51	78.740	Cebus_capucinus
ENSSSCG00000033638	-	95	70.470	ENSCCAG00000031750	-	58	70.470	Cebus_capucinus
ENSSSCG00000033638	-	91	70.796	ENSCCAG00000031444	-	51	70.796	Cebus_capucinus
ENSSSCG00000033638	-	95	63.514	ENSCANG00000036233	-	95	63.514	Colobus_angolensis_palliatus
ENSSSCG00000033638	-	96	73.826	ENSDORG00000013935	Pabpc1	54	73.826	Dipodomys_ordii
ENSSSCG00000033638	-	84	78.495	ENSFALG00000005841	PABPC1	50	78.495	Ficedula_albicollis
ENSSSCG00000033638	-	96	73.826	ENSGALG00000030280	PABPC1	54	73.826	Gallus_gallus
ENSSSCG00000033638	-	96	73.826	ENSGAGG00000000869	PABPC1	54	73.826	Gopherus_agassizii
ENSSSCG00000033638	-	85	44.776	ENSIPUG00000010020	-	67	44.776	Ictalurus_punctatus
ENSSSCG00000033638	-	83	68.800	ENSJJAG00000019230	Pabpc6	52	68.800	Jaculus_jaculus
ENSSSCG00000033638	-	84	77.895	ENSMFAG00000004725	-	51	77.895	Macaca_fascicularis
ENSSSCG00000033638	-	96	73.826	ENSMMUG00000017786	PABPC1	51	78.740	Macaca_mulatta
ENSSSCG00000033638	-	81	77.895	ENSMMUG00000047411	-	57	75.758	Macaca_mulatta
ENSSSCG00000033638	-	95	70.946	ENSMMUG00000020835	PABPC3	59	70.946	Macaca_mulatta
ENSSSCG00000033638	-	96	73.826	ENSMNEG00000009340	-	54	78.740	Macaca_nemestrina
ENSSSCG00000033638	-	84	74.000	ENSMGAG00000012239	PABPC1	51	74.000	Meleagris_gallopavo
ENSSSCG00000033638	-	95	69.128	ENSMAUG00000017991	Pabpc2	54	69.128	Mesocricetus_auratus
ENSSSCG00000033638	-	96	73.826	ENSMICG00000009121	PABPC1	54	73.826	Microcebus_murinus
ENSSSCG00000033638	-	81	77.500	ENSMOCG00000018191	-	55	77.500	Microtus_ochrogaster
ENSSSCG00000033638	-	95	69.799	ENSMOCG00000001354	Pabpc2	55	69.799	Microtus_ochrogaster
ENSSSCG00000033638	-	95	69.128	MGP_CAROLIEiJ_G0022217	Pabpc2	55	69.128	Mus_caroli
ENSSSCG00000033638	-	96	73.826	ENSMUSG00000022283	Pabpc1	93	71.186	Mus_musculus
ENSSSCG00000033638	-	95	69.128	ENSMUSG00000051732	Pabpc2	55	69.128	Mus_musculus
ENSSSCG00000033638	-	96	73.826	MGP_PahariEiJ_G0019749	Pabpc1	54	73.826	Mus_pahari
ENSSSCG00000033638	-	95	69.799	MGP_PahariEiJ_G0018950	Pabpc2	55	69.799	Mus_pahari
ENSSSCG00000033638	-	95	69.128	MGP_SPRETEiJ_G0023126	Pabpc2	55	69.128	Mus_spretus
ENSSSCG00000033638	-	96	73.826	MGP_SPRETEiJ_G0020636	Pabpc1	54	73.826	Mus_spretus
ENSSSCG00000033638	-	95	61.644	ENSMLUG00000030069	-	54	61.644	Myotis_lucifugus
ENSSSCG00000033638	-	95	66.216	ENSODEG00000013269	-	56	70.079	Octodon_degus
ENSSSCG00000033638	-	96	73.826	ENSOANG00000007307	PABPC1	54	73.826	Ornithorhynchus_anatinus
ENSSSCG00000033638	-	95	67.114	ENSPPAG00000037498	-	50	70.866	Pan_paniscus
ENSSSCG00000033638	-	96	73.826	ENSPSIG00000003719	PABPC1	52	78.740	Pelodiscus_sinensis
ENSSSCG00000033638	-	96	73.826	ENSPCIG00000000267	-	62	78.740	Phascolarctos_cinereus
ENSSSCG00000033638	-	95	73.154	ENSPCOG00000013197	PABPC3	54	73.154	Propithecus_coquereli
ENSSSCG00000033638	-	95	71.141	ENSRNOG00000017367	Pabpc6	55	71.141	Rattus_norvegicus
ENSSSCG00000033638	-	95	69.799	ENSRNOG00000014527	Pabpc2	54	69.799	Rattus_norvegicus
ENSSSCG00000033638	-	96	73.826	ENSRNOG00000008639	Pabpc1	64	73.826	Rattus_norvegicus
ENSSSCG00000033638	-	93	56.643	ENSRBIG00000000042	-	71	56.643	Rhinopithecus_bieti
ENSSSCG00000033638	-	95	72.483	ENSRROG00000042796	-	62	77.953	Rhinopithecus_roxellana
ENSSSCG00000033638	-	93	56.643	ENSRROG00000028723	-	57	56.643	Rhinopithecus_roxellana
ENSSSCG00000033638	-	95	65.772	ENSSBOG00000021975	-	61	65.772	Saimiri_boliviensis_boliviensis
ENSSSCG00000033638	-	95	71.233	ENSSBOG00000025499	-	60	71.233	Saimiri_boliviensis_boliviensis
ENSSSCG00000033638	-	95	63.758	ENSSBOG00000020745	-	53	63.758	Saimiri_boliviensis_boliviensis
ENSSSCG00000033638	-	95	64.430	ENSSFOG00015006617	-	54	64.430	Scleropages_formosus
ENSSSCG00000033638	-	96	73.826	ENSSPUG00000018267	PABPC1	54	73.826	Sphenodon_punctatus
ENSSSCG00000033638	-	96	73.826	ENSTGUG00000012067	PABPC1	54	73.826	Taeniopygia_guttata
ENSSSCG00000033638	-	96	73.154	ENSXETG00000006635	pabpc1	54	73.154	Xenopus_tropicalis