EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033858 (Gene tree)
Gene ID: 110257936
Gene Symbol: -
Alias: -
Full Name: putative GTP-binding protein 6
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 11991 bases
Position: chrY:6984332-6996322
Accession: 110257936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039464	MMR_HSR1	PF01926.23	2.4e-13	1	1
ENSSSCP00000043310	MMR_HSR1	PF01926.23	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000044015	-	4450	XM_021080945	ENSSSCP00000043310	519 (aa)	XP_020936604	A0A287AHH2
ENSSSCT00000060483	-	4958	-	ENSSSCP00000039464	428 (aa)	-	A0A287A662

Gene Model

Click here to download ENSSSCG00000033858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033858	-	100	100.000	ENSSSCG00000037491	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033858	-	100	76.690	ENSG00000178605	GTPBP6	99	75.479	Homo_sapiens
ENSSSCG00000033858	-	84	61.416	ENSAPOG00000001396	gtpbp6	79	62.559	Acanthochromis_polyacanthus
ENSSSCG00000033858	-	91	84.177	ENSAMEG00000001958	GTPBP6	97	85.621	Ailuropoda_melanoleuca
ENSSSCG00000033858	-	82	60.563	ENSACIG00000001694	gtpbp6	72	59.740	Amphilophus_citrinellus
ENSSSCG00000033858	-	84	60.502	ENSAOCG00000014817	gtpbp6	79	61.611	Amphiprion_ocellaris
ENSSSCG00000033858	-	84	60.502	ENSAPEG00000017894	gtpbp6	79	61.611	Amphiprion_percula
ENSSSCG00000033858	-	84	59.817	ENSATEG00000012768	gtpbp6	79	60.900	Anabas_testudineus
ENSSSCG00000033858	-	77	66.915	ENSAPLG00000005592	GTPBP6	98	66.915	Anas_platyrhynchos
ENSSSCG00000033858	-	99	59.535	ENSACAG00000011834	GTPBP6	82	65.888	Anolis_carolinensis
ENSSSCG00000033858	-	87	59.081	ENSACLG00000002216	gtpbp6	80	60.373	Astatotilapia_calliptera
ENSSSCG00000033858	-	94	55.268	ENSAMXG00000012493	gtpbp6	84	61.098	Astyanax_mexicanus
ENSSSCG00000033858	-	100	77.622	ENSBTAG00000054315	GTPBP6	99	78.613	Bos_taurus
ENSSSCG00000033858	-	68	79.320	ENSCJAG00000013056	GTPBP6	99	79.320	Callithrix_jacchus
ENSSSCG00000033858	-	100	78.178	ENSCAFG00000010931	GTPBP6	100	78.368	Canis_familiaris
ENSSSCG00000033858	-	100	77.989	ENSCAFG00020001279	-	100	78.178	Canis_lupus_dingo
ENSSSCG00000033858	-	100	77.989	ENSCAFG00020010766	-	100	78.178	Canis_lupus_dingo
ENSSSCG00000033858	-	100	79.487	ENSCHIG00000000121	GTPBP6	99	79.191	Capra_hircus
ENSSSCG00000033858	-	100	73.427	ENSCCAG00000032874	GTPBP6	99	73.563	Cebus_capucinus
ENSSSCG00000033858	-	100	75.291	ENSCATG00000024945	GTPBP6	99	73.372	Cercocebus_atys
ENSSSCG00000033858	-	65	76.923	ENSCLAG00000000054	-	100	76.923	Chinchilla_lanigera
ENSSSCG00000033858	-	50	79.923	ENSCSAG00000018371	-	99	79.923	Chlorocebus_sabaeus
ENSSSCG00000033858	-	50	78.082	ENSCHOG00000012888	-	68	78.082	Choloepus_hoffmanni
ENSSSCG00000033858	-	82	67.371	ENSCPBG00000007520	GTPBP6	82	67.371	Chrysemys_picta_bellii
ENSSSCG00000033858	-	88	38.346	ENSCING00000012867	-	77	39.409	Ciona_intestinalis
ENSSSCG00000033858	-	68	42.088	ENSCSAVG00000009232	-	97	35.915	Ciona_savignyi
ENSSSCG00000033858	-	99	65.085	ENSCGRG00001022411	Gtpbp6	85	69.910	Cricetulus_griseus_chok1gshd
ENSSSCG00000033858	-	79	70.574	ENSCGRG00000007715	Gtpbp6	95	70.574	Cricetulus_griseus_crigri
ENSSSCG00000033858	-	93	54.192	ENSCSEG00000007271	gtpbp6	83	58.057	Cynoglossus_semilaevis
ENSSSCG00000033858	-	84	60.909	ENSCVAG00000015417	gtpbp6	83	61.882	Cyprinodon_variegatus
ENSSSCG00000033858	-	86	59.292	ENSDARG00000061091	gtpbp6	79	60.606	Danio_rerio
ENSSSCG00000033858	-	100	59.453	ENSDNOG00000039508	GTPBP6	100	61.503	Dasypus_novemcinctus
ENSSSCG00000033858	-	82	39.545	FBgn0039339	CG5116	82	39.545	Drosophila_melanogaster
ENSSSCG00000033858	-	91	46.042	ENSEBUG00000000404	gtpbp6	78	47.575	Eptatretus_burgeri
ENSSSCG00000033858	-	100	79.446	ENSEASG00005007092	-	68	84.615	Equus_asinus_asinus
ENSSSCG00000033858	-	100	78.571	ENSECAG00000032734	GTPBP6	99	79.576	Equus_caballus
ENSSSCG00000033858	-	79	63.690	ENSELUG00000016376	gtpbp6	74	61.893	Esox_lucius
ENSSSCG00000033858	-	99	72.937	ENSFCAG00000013263	-	100	72.553	Felis_catus
ENSSSCG00000033858	-	99	73.005	ENSFCAG00000010310	-	98	80.894	Felis_catus
ENSSSCG00000033858	-	83	65.581	ENSFALG00000004133	GTPBP6	91	65.438	Ficedula_albicollis
ENSSSCG00000033858	-	88	59.307	ENSFHEG00000012018	gtpbp6	81	61.611	Fundulus_heteroclitus
ENSSSCG00000033858	-	77	61.845	ENSGMOG00000004778	gtpbp6	99	61.845	Gadus_morhua
ENSSSCG00000033858	-	76	67.254	ENSGALG00000016717	GTPBP6	98	67.424	Gallus_gallus
ENSSSCG00000033858	-	81	62.796	ENSGAFG00000018158	gtpbp6	74	62.796	Gambusia_affinis
ENSSSCG00000033858	-	77	61.845	ENSGACG00000013857	gtpbp6	99	61.845	Gasterosteus_aculeatus
ENSSSCG00000033858	-	82	67.849	ENSGAGG00000021606	GTPBP6	81	67.849	Gopherus_agassizii
ENSSSCG00000033858	-	55	80.070	ENSGGOG00000002792	-	99	80.070	Gorilla_gorilla
ENSSSCG00000033858	-	87	59.081	ENSHBUG00000013113	gtpbp6	79	60.900	Haplochromis_burtoni
ENSSSCG00000033858	-	84	75.115	ENSHGLG00000000207	GTPBP6	85	75.115	Heterocephalus_glaber_female
ENSSSCG00000033858	-	72	76.052	ENSHGLG00100000320	GTPBP6	100	74.652	Heterocephalus_glaber_male
ENSSSCG00000033858	-	82	46.824	ENSHCOG00000012544	gtpbp6	91	59.298	Hippocampus_comes
ENSSSCG00000033858	-	82	61.215	ENSIPUG00000022531	gtpbp6	79	61.215	Ictalurus_punctatus
ENSSSCG00000033858	-	84	58.314	ENSKMAG00000016464	gtpbp6	82	59.251	Kryptolebias_marmoratus
ENSSSCG00000033858	-	77	64.955	ENSLBEG00000024203	gtpbp6	80	60.900	Labrus_bergylta
ENSSSCG00000033858	-	85	66.440	ENSLACG00000012754	GTPBP6	78	67.130	Latimeria_chalumnae
ENSSSCG00000033858	-	89	59.660	ENSLOCG00000008009	gtpbp6	88	64.133	Lepisosteus_oculatus
ENSSSCG00000033858	-	100	75.291	ENSMFAG00000041568	GTPBP6	99	73.563	Macaca_fascicularis
ENSSSCG00000033858	-	99	64.933	ENSMNEG00000039609	GTPBP6	99	63.027	Macaca_nemestrina
ENSSSCG00000033858	-	84	59.817	ENSMAMG00000012631	gtpbp6	80	60.900	Mastacembelus_armatus
ENSSSCG00000033858	-	87	59.081	ENSMZEG00005002869	gtpbp6	80	60.373	Maylandia_zebra
ENSSSCG00000033858	-	72	70.000	ENSMGAG00000014752	GTPBP6	94	64.829	Meleagris_gallopavo
ENSSSCG00000033858	-	95	56.010	ENSMMOG00000005950	gtpbp6	81	61.374	Mola_mola
ENSSSCG00000033858	-	82	70.213	ENSMODG00000000326	GTPBP6	92	69.977	Monodelphis_domestica
ENSSSCG00000033858	-	81	59.005	ENSMALG00000014993	gtpbp6	79	59.005	Monopterus_albus
ENSSSCG00000033858	-	81	66.271	MGP_CAROLIEiJ_G0027536	Gtpbp6	84	66.051	Mus_caroli
ENSSSCG00000033858	-	81	67.062	ENSMUSG00000033434	Gtpbp6	84	66.975	Mus_musculus
ENSSSCG00000033858	-	81	66.588	MGP_SPRETEiJ_G0028534	Gtpbp6	84	66.513	Mus_spretus
ENSSSCG00000033858	-	77	84.289	ENSMPUG00000001536	GTPBP6	86	84.289	Mustela_putorius_furo
ENSSSCG00000033858	-	100	65.209	ENSNGAG00000011609	Gtpbp6	100	65.143	Nannospalax_galili
ENSSSCG00000033858	-	99	55.116	ENSNBRG00000017629	gtpbp6	79	61.137	Neolamprologus_brichardi
ENSSSCG00000033858	-	88	62.141	ENSMEUG00000001355	-	79	72.014	Notamacropus_eugenii
ENSSSCG00000033858	-	100	65.421	ENSODEG00000001052	GTPBP6	100	65.764	Octodon_degus
ENSSSCG00000033858	-	87	59.300	ENSONIG00000007330	gtpbp6	80	61.137	Oreochromis_niloticus
ENSSSCG00000033858	-	87	58.606	ENSOANG00000007007	-	96	59.410	Ornithorhynchus_anatinus
ENSSSCG00000033858	-	100	73.077	ENSOCUG00000008245	GTPBP6	100	70.209	Oryctolagus_cuniculus
ENSSSCG00000033858	-	87	58.811	ENSORLG00000016077	gtpbp6	82	60.748	Oryzias_latipes
ENSSSCG00000033858	-	87	58.811	ENSORLG00020018687	gtpbp6	82	60.748	Oryzias_latipes_hni
ENSSSCG00000033858	-	87	58.370	ENSORLG00015014255	gtpbp6	82	60.280	Oryzias_latipes_hsok
ENSSSCG00000033858	-	87	60.132	ENSOMEG00000004496	gtpbp6	82	61.916	Oryzias_melastigma
ENSSSCG00000033858	-	83	78.753	ENSOGAG00000011327	GTPBP6	97	78.753	Otolemur_garnettii
ENSSSCG00000033858	-	77	77.340	ENSOARG00000000946	GTPBP6	98	77.396	Ovis_aries
ENSSSCG00000033858	-	72	82.201	ENSPPAG00000028400	-	80	80.110	Pan_paniscus
ENSSSCG00000033858	-	98	72.076	ENSPPRG00000004932	-	100	70.138	Panthera_pardus
ENSSSCG00000033858	-	88	81.081	ENSPPRG00000006710	-	99	64.355	Panthera_pardus
ENSSSCG00000033858	-	100	76.457	ENSPTRG00000050696	GTPBP6	99	75.479	Pan_troglodytes
ENSSSCG00000033858	-	100	72.028	ENSPANG00000011580	GTPBP6	99	71.264	Papio_anubis
ENSSSCG00000033858	-	87	61.589	ENSPKIG00000022514	gtpbp6	75	64.048	Paramormyrops_kingsleyae
ENSSSCG00000033858	-	78	68.734	ENSPSIG00000013117	GTPBP6	100	68.734	Pelodiscus_sinensis
ENSSSCG00000033858	-	77	51.880	ENSPMAG00000006496	gtpbp6	99	51.880	Petromyzon_marinus
ENSSSCG00000033858	-	99	63.810	ENSPCIG00000016456	GTPBP6	84	68.822	Phascolarctos_cinereus
ENSSSCG00000033858	-	81	63.507	ENSPFOG00000015695	gtpbp6	99	64.051	Poecilia_formosa
ENSSSCG00000033858	-	81	63.270	ENSPLAG00000015495	gtpbp6	81	63.270	Poecilia_latipinna
ENSSSCG00000033858	-	81	63.270	ENSPMEG00000000859	gtpbp6	81	63.270	Poecilia_mexicana
ENSSSCG00000033858	-	81	63.744	ENSPREG00000017643	gtpbp6	81	63.744	Poecilia_reticulata
ENSSSCG00000033858	-	53	81.022	ENSPPYG00000020075	-	99	81.022	Pongo_abelii
ENSSSCG00000033858	-	63	84.762	ENSPCOG00000014096	GTPBP6	76	84.762	Propithecus_coquereli
ENSSSCG00000033858	-	87	59.081	ENSPNYG00000000521	gtpbp6	78	60.900	Pundamilia_nyererei
ENSSSCG00000033858	-	89	57.204	ENSPNAG00000002094	gtpbp6	78	59.907	Pygocentrus_nattereri
ENSSSCG00000033858	-	82	64.252	ENSRNOG00000037426	Gtpbp6	84	64.203	Rattus_norvegicus
ENSSSCG00000033858	-	82	64.252	ENSRNOG00000048168	Gtpbp6	84	64.203	Rattus_norvegicus
ENSSSCG00000033858	-	100	74.359	ENSRBIG00000027538	GTPBP6	99	73.563	Rhinopithecus_bieti
ENSSSCG00000033858	-	100	73.893	ENSRROG00000033503	GTPBP6	99	73.180	Rhinopithecus_roxellana
ENSSSCG00000033858	-	99	63.118	ENSSHAG00000015570	GTPBP6	84	70.575	Sarcophilus_harrisii
ENSSSCG00000033858	-	87	61.319	ENSSFOG00015004098	gtpbp6	75	64.678	Scleropages_formosus
ENSSSCG00000033858	-	84	60.502	ENSSMAG00000019520	gtpbp6	79	61.412	Scophthalmus_maximus
ENSSSCG00000033858	-	85	59.234	ENSSDUG00000002202	gtpbp6	79	60.471	Seriola_dumerili
ENSSSCG00000033858	-	87	59.574	ENSSLDG00000023633	gtpbp6	88	60.000	Seriola_lalandi_dorsalis
ENSSSCG00000033858	-	98	59.454	ENSSPUG00000005537	GTPBP6	83	65.647	Sphenodon_punctatus
ENSSSCG00000033858	-	55	61.111	ENSSPAG00000017331	gtpbp6	96	61.111	Stegastes_partitus
ENSSSCG00000033858	-	84	59.318	ENSSPAG00000017406	gtpbp6	79	60.377	Stegastes_partitus
ENSSSCG00000033858	-	85	64.108	ENSTGUG00000010642	-	96	64.977	Taeniopygia_guttata
ENSSSCG00000033858	-	85	58.784	ENSTRUG00000011175	gtpbp6	82	60.664	Takifugu_rubripes
ENSSSCG00000033858	-	81	60.095	ENSTNIG00000010659	gtpbp6	98	60.095	Tetraodon_nigroviridis
ENSSSCG00000033858	-	77	87.032	ENSUMAG00000018848	GTPBP6	99	87.032	Ursus_maritimus
ENSSSCG00000033858	-	86	82.749	ENSVVUG00000008199	GTPBP6	73	83.373	Vulpes_vulpes
ENSSSCG00000033858	-	82	64.471	ENSXETG00000004125	gtpbp6	80	64.471	Xenopus_tropicalis
ENSSSCG00000033858	-	66	66.431	ENSXCOG00000006281	gtpbp6	57	66.431	Xiphophorus_couchianus
ENSSSCG00000033858	-	81	62.796	ENSXMAG00000015980	gtpbp6	81	62.796	Xiphophorus_maculatus