EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000033865 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 817 bases
Position: chr2:57691180-57691996
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000054538	SMN	PF06003.12	2.3e-33	1	2
ENSSSCP00000054538	SMN	PF06003.12	2.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037762	-	534	-	ENSSSCP00000054538	177 (aa)	-	A0A287BEK1

Gene Model

Click here to download ENSSSCG00000033865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000033865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000033865	-	95	64.815	ENSSSCG00000016970	-	80	66.355
ENSSSCG00000033865	-	92	72.892	ENSSSCG00000029127	-	67	71.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000033865	-	94	61.033	ENSG00000172062	SMN1	72	57.746	Homo_sapiens
ENSSSCG00000033865	-	94	61.033	ENSG00000205571	SMN2	85	89.744	Homo_sapiens
ENSSSCG00000033865	-	95	60.185	ENSAMEG00000003316	-	71	61.033	Ailuropoda_melanoleuca
ENSSSCG00000033865	-	90	40.594	ENSACAG00000010017	-	72	35.266	Anolis_carolinensis
ENSSSCG00000033865	-	92	58.511	ENSANAG00000032133	-	79	54.419	Aotus_nancymaae
ENSSSCG00000033865	-	95	57.674	ENSBTAG00000005743	SMN2	74	57.277	Bos_taurus
ENSSSCG00000033865	-	94	60.104	ENSCJAG00000016290	-	72	56.542	Callithrix_jacchus
ENSSSCG00000033865	-	95	60.185	ENSCAFG00000007812	SMN	74	61.033	Canis_familiaris
ENSSSCG00000033865	-	95	61.395	ENSCAFG00020019229	-	68	60.849	Canis_lupus_dingo
ENSSSCG00000033865	-	95	58.605	ENSCHIG00000015559	-	73	58.605	Capra_hircus
ENSSSCG00000033865	-	94	61.137	ENSTSYG00000012058	-	73	58.768	Carlito_syrichta
ENSSSCG00000033865	-	87	47.959	ENSCAPG00000011021	-	87	49.744	Cavia_aperea
ENSSSCG00000033865	-	95	55.300	ENSCPOG00000012328	-	72	56.075	Cavia_porcellus
ENSSSCG00000033865	-	95	55.300	ENSCPOG00000036973	-	74	56.075	Cavia_porcellus
ENSSSCG00000033865	-	94	58.549	ENSCCAG00000018127	-	72	55.660	Cebus_capucinus
ENSSSCG00000033865	-	94	60.563	ENSCATG00000037002	-	72	57.547	Cercocebus_atys
ENSSSCG00000033865	-	93	55.825	ENSCLAG00000000284	-	72	55.924	Chinchilla_lanigera
ENSSSCG00000033865	-	92	61.722	ENSCSAG00000015688	-	72	58.216	Chlorocebus_sabaeus
ENSSSCG00000033865	-	66	84.615	ENSCHOG00000007346	-	79	50.251	Choloepus_hoffmanni
ENSSSCG00000033865	-	94	42.788	ENSCPBG00000010968	-	78	43.750	Chrysemys_picta_bellii
ENSSSCG00000033865	-	94	62.559	ENSCANG00000038242	-	72	58.768	Colobus_angolensis_palliatus
ENSSSCG00000033865	-	94	59.067	ENSCANG00000033324	-	68	58.031	Colobus_angolensis_palliatus
ENSSSCG00000033865	-	92	59.487	ENSCGRG00001016998	-	83	53.030	Cricetulus_griseus_chok1gshd
ENSSSCG00000033865	-	92	55.769	ENSCGRG00001017959	-	74	49.289	Cricetulus_griseus_chok1gshd
ENSSSCG00000033865	-	92	55.769	ENSCGRG00000007698	Smn1	74	49.289	Cricetulus_griseus_crigri
ENSSSCG00000033865	-	63	50.794	ENSDNOG00000045949	-	58	48.413	Dasypus_novemcinctus
ENSSSCG00000033865	-	95	58.962	ENSDNOG00000007283	-	88	59.434	Dasypus_novemcinctus
ENSSSCG00000033865	-	95	56.944	ENSDORG00000007082	Smn1	79	54.930	Dipodomys_ordii
ENSSSCG00000033865	-	53	55.085	ENSETEG00000001406	-	57	44.915	Echinops_telfairi
ENSSSCG00000033865	-	84	58.378	ENSEASG00005018000	-	70	56.545	Equus_asinus_asinus
ENSSSCG00000033865	-	92	58.571	ENSECAG00000015215	-	74	57.209	Equus_caballus
ENSSSCG00000033865	-	87	53.807	ENSEEUG00000015777	-	79	53.299	Erinaceus_europaeus
ENSSSCG00000033865	-	92	37.811	ENSELUG00000018067	smn1	72	31.343	Esox_lucius
ENSSSCG00000033865	-	95	62.963	ENSFCAG00000028292	SMN	74	61.682	Felis_catus
ENSSSCG00000033865	-	92	44.792	ENSFALG00000012320	-	71	43.005	Ficedula_albicollis
ENSSSCG00000033865	-	91	58.333	ENSFDAG00000017683	-	72	58.019	Fukomys_damarensis
ENSSSCG00000033865	-	94	42.365	ENSGAGG00000011374	-	73	44.498	Gopherus_agassizii
ENSSSCG00000033865	-	92	56.842	ENSGGOG00000003872	-	68	55.556	Gorilla_gorilla
ENSSSCG00000033865	-	51	61.207	ENSGGOG00000026704	-	62	56.716	Gorilla_gorilla
ENSSSCG00000033865	-	95	58.019	ENSHGLG00000001018	-	71	56.190	Heterocephalus_glaber_female
ENSSSCG00000033865	-	95	55.189	ENSHGLG00000001905	-	75	54.245	Heterocephalus_glaber_female
ENSSSCG00000033865	-	89	53.000	ENSHGLG00100018676	-	74	52.000	Heterocephalus_glaber_male
ENSSSCG00000033865	-	95	58.019	ENSHGLG00100011252	-	71	56.190	Heterocephalus_glaber_male
ENSSSCG00000033865	-	87	55.500	ENSSTOG00000012288	-	71	53.846	Ictidomys_tridecemlineatus
ENSSSCG00000033865	-	87	34.078	ENSLOCG00000011339	smn1	71	34.673	Lepisosteus_oculatus
ENSSSCG00000033865	-	95	56.944	ENSLAFG00000003425	-	100	51.948	Loxodonta_africana
ENSSSCG00000033865	-	94	59.434	ENSMFAG00000008812	-	72	57.075	Macaca_fascicularis
ENSSSCG00000033865	-	94	62.617	ENSMFAG00000031523	SMN1	77	58.685	Macaca_fascicularis
ENSSSCG00000033865	-	94	59.434	ENSMMUG00000030594	-	72	57.075	Macaca_mulatta
ENSSSCG00000033865	-	94	62.617	ENSMMUG00000020214	SMN1	72	58.685	Macaca_mulatta
ENSSSCG00000033865	-	94	52.830	ENSMNEG00000036423	-	82	50.472	Macaca_nemestrina
ENSSSCG00000033865	-	94	62.150	ENSMNEG00000035094	-	72	58.216	Macaca_nemestrina
ENSSSCG00000033865	-	94	62.176	ENSMLEG00000041902	-	72	58.216	Mandrillus_leucophaeus
ENSSSCG00000033865	-	93	54.545	ENSMAUG00000010262	Smn1	74	53.302	Mesocricetus_auratus
ENSSSCG00000033865	-	95	54.359	ENSMICG00000034708	-	70	51.282	Microcebus_murinus
ENSSSCG00000033865	-	92	55.340	ENSMOCG00000017833	Smn1	73	46.667	Microtus_ochrogaster
ENSSSCG00000033865	-	90	51.256	ENSMODG00000001436	-	69	49.751	Monodelphis_domestica
ENSSSCG00000033865	-	95	55.399	MGP_CAROLIEiJ_G0018836	Smn1	77	56.800	Mus_caroli
ENSSSCG00000033865	-	95	56.808	ENSMUSG00000021645	Smn1	77	56.800	Mus_musculus
ENSSSCG00000033865	-	95	53.521	MGP_PahariEiJ_G0015911	Smn1	78	52.800	Mus_pahari
ENSSSCG00000033865	-	95	55.869	MGP_SPRETEiJ_G0019718	Smn1	77	56.000	Mus_spretus
ENSSSCG00000033865	-	87	58.416	ENSMPUG00000014470	-	71	56.784	Mustela_putorius_furo
ENSSSCG00000033865	-	95	60.633	ENSMLUG00000010603	-	71	59.729	Myotis_lucifugus
ENSSSCG00000033865	-	91	55.825	ENSNGAG00000019833	Smn1	74	55.607	Nannospalax_galili
ENSSSCG00000033865	-	94	60.563	ENSNLEG00000004454	-	72	57.277	Nomascus_leucogenys
ENSSSCG00000033865	-	83	49.462	ENSMEUG00000011393	-	87	49.485	Notamacropus_eugenii
ENSSSCG00000033865	-	87	53.465	ENSOPRG00000002015	-	79	53.234	Ochotona_princeps
ENSSSCG00000033865	-	87	53.769	ENSODEG00000015976	-	71	53.769	Octodon_degus
ENSSSCG00000033865	-	93	46.798	ENSOANG00000001626	-	74	44.444	Ornithorhynchus_anatinus
ENSSSCG00000033865	-	90	60.513	ENSOCUG00000026649	-	70	59.606	Oryctolagus_cuniculus
ENSSSCG00000033865	-	90	60.766	ENSOCUG00000025183	-	80	58.065	Oryctolagus_cuniculus
ENSSSCG00000033865	-	90	61.224	ENSOCUG00000017097	-	72	60.294	Oryctolagus_cuniculus
ENSSSCG00000033865	-	87	57.143	ENSOGAG00000031414	-	70	52.709	Otolemur_garnettii
ENSSSCG00000033865	-	95	57.209	ENSOARG00000005425	-	78	56.808	Ovis_aries
ENSSSCG00000033865	-	94	60.563	ENSPPAG00000036640	-	72	57.277	Pan_paniscus
ENSSSCG00000033865	-	95	62.963	ENSPPRG00000005575	-	74	61.682	Panthera_pardus
ENSSSCG00000033865	-	95	62.963	ENSPTIG00000007745	-	74	61.860	Panthera_tigris_altaica
ENSSSCG00000033865	-	94	60.622	ENSPTRG00000016955	-	72	57.870	Pan_troglodytes
ENSSSCG00000033865	-	94	62.617	ENSPANG00000013601	-	72	58.685	Papio_anubis
ENSSSCG00000033865	-	94	55.000	ENSPANG00000000253	-	71	55.024	Papio_anubis
ENSSSCG00000033865	-	94	43.062	ENSPSIG00000014787	-	68	42.584	Pelodiscus_sinensis
ENSSSCG00000033865	-	92	53.234	ENSPCIG00000025764	-	73	50.476	Phascolarctos_cinereus
ENSSSCG00000033865	-	86	39.326	ENSPPYG00000019189	-	73	36.875	Pongo_abelii
ENSSSCG00000033865	-	94	61.033	ENSPPYG00000015533	-	77	57.746	Pongo_abelii
ENSSSCG00000033865	-	93	55.189	ENSPCAG00000004187	-	81	55.093	Procavia_capensis
ENSSSCG00000033865	-	95	52.284	ENSPCOG00000022307	-	79	49.231	Propithecus_coquereli
ENSSSCG00000033865	-	95	62.441	ENSPVAG00000005977	-	73	61.972	Pteropus_vampyrus
ENSSSCG00000033865	-	92	53.589	ENSRNOG00000018067	Smn1	74	52.113	Rattus_norvegicus
ENSSSCG00000033865	-	87	61.326	ENSRBIG00000036775	-	65	60.773	Rhinopithecus_bieti
ENSSSCG00000033865	-	94	61.972	ENSRBIG00000037052	-	72	58.216	Rhinopithecus_bieti
ENSSSCG00000033865	-	94	61.972	ENSRROG00000039399	-	72	58.216	Rhinopithecus_roxellana
ENSSSCG00000033865	-	94	60.104	ENSRROG00000031088	-	69	57.297	Rhinopithecus_roxellana
ENSSSCG00000033865	-	94	60.476	ENSSBOG00000011665	-	72	57.143	Saimiri_boliviensis_boliviensis
ENSSSCG00000033865	-	82	52.525	ENSSBOG00000020112	-	69	48.990	Saimiri_boliviensis_boliviensis
ENSSSCG00000033865	-	92	53.234	ENSSHAG00000001499	-	77	51.429	Sarcophilus_harrisii
ENSSSCG00000033865	-	92	43.000	ENSSPUG00000000373	-	71	37.186	Sphenodon_punctatus
ENSSSCG00000033865	-	50	60.870	ENSTBEG00000002399	-	63	60.000	Tupaia_belangeri
ENSSSCG00000033865	-	95	59.524	ENSTTRG00000005080	-	72	59.524	Tursiops_truncatus
ENSSSCG00000033865	-	95	60.648	ENSUMAG00000007842	-	55	61.502	Ursus_maritimus
ENSSSCG00000033865	-	95	60.185	ENSVVUG00000006934	-	74	61.033	Vulpes_vulpes