EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034001 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3854 bases
Position: chrAEMK02000276.1:14815-18668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000048864	RNA_pol_Rpb4	PF03874.16	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049754	-	336	-	ENSSSCP00000048864	111 (aa)	-	A0A287AYA1

Gene Model

Click here to download ENSSSCG00000034001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034001	-	77	86.517	ENSSSCG00000039653	-	91	86.517
ENSSSCG00000034001	-	98	70.229	ENSSSCG00000032119	-	88	70.229
ENSSSCG00000034001	-	100	93.860	ENSSSCG00000031397	-	100	93.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034001	-	73	73.267	ENSG00000241258	CRCP	88	67.176	Homo_sapiens
ENSSSCG00000034001	-	73	64.356	ENSAPOG00000016572	crcp	72	66.038	Acanthochromis_polyacanthus
ENSSSCG00000034001	-	95	67.969	ENSAMEG00000015954	CRCP	88	67.969	Ailuropoda_melanoleuca
ENSSSCG00000034001	-	68	58.947	ENSACIG00000020248	crcp	82	54.472	Amphilophus_citrinellus
ENSSSCG00000034001	-	73	64.356	ENSAOCG00000021389	crcp	72	66.038	Amphiprion_ocellaris
ENSSSCG00000034001	-	54	58.750	ENSAPEG00000016688	crcp	58	58.750	Amphiprion_percula
ENSSSCG00000034001	-	73	62.376	ENSATEG00000008670	crcp	88	57.364	Anabas_testudineus
ENSSSCG00000034001	-	98	67.939	ENSANAG00000032466	CRCP	88	67.939	Aotus_nancymaae
ENSSSCG00000034001	-	73	63.366	ENSACLG00000007588	crcp	88	58.140	Astatotilapia_calliptera
ENSSSCG00000034001	-	75	61.165	ENSAMXG00000043940	crcp	71	61.165	Astyanax_mexicanus
ENSSSCG00000034001	-	98	66.412	ENSBTAG00000049986	-	88	66.412	Bos_taurus
ENSSSCG00000034001	-	98	67.176	ENSBTAG00000037489	CRCP	88	67.176	Bos_taurus
ENSSSCG00000034001	-	77	32.381	WBGene00044924	M106.7	80	32.381	Caenorhabditis_elegans
ENSSSCG00000034001	-	98	67.176	ENSCJAG00000004225	CRCP	88	67.176	Callithrix_jacchus
ENSSSCG00000034001	-	98	67.939	ENSCAFG00000010756	CRCP	88	67.939	Canis_familiaris
ENSSSCG00000034001	-	98	67.939	ENSCAFG00020005322	CRCP	88	67.939	Canis_lupus_dingo
ENSSSCG00000034001	-	67	67.021	ENSCHIG00000015299	CRCP	78	61.600	Capra_hircus
ENSSSCG00000034001	-	98	67.176	ENSTSYG00000005933	CRCP	88	67.176	Carlito_syrichta
ENSSSCG00000034001	-	73	62.963	ENSCATG00000036957	CRCP	84	58.559	Cercocebus_atys
ENSSSCG00000034001	-	98	64.122	ENSCLAG00000007249	CRCP	88	64.122	Chinchilla_lanigera
ENSSSCG00000034001	-	59	69.767	ENSCSAG00000018288	CRCP	65	63.793	Chlorocebus_sabaeus
ENSSSCG00000034001	-	73	66.337	ENSCPBG00000014854	CRCP	72	67.925	Chrysemys_picta_bellii
ENSSSCG00000034001	-	60	34.483	ENSCING00000003588	cgrp-rcp	73	38.043	Ciona_intestinalis
ENSSSCG00000034001	-	98	67.939	ENSCANG00000038796	CRCP	88	67.939	Colobus_angolensis_palliatus
ENSSSCG00000034001	-	73	70.297	ENSCGRG00001009376	Crcp	87	65.385	Cricetulus_griseus_chok1gshd
ENSSSCG00000034001	-	73	69.307	ENSCGRG00000003194	Crcp	87	64.615	Cricetulus_griseus_crigri
ENSSSCG00000034001	-	70	57.143	ENSCSEG00000018814	crcp	70	59.223	Cynoglossus_semilaevis
ENSSSCG00000034001	-	73	56.436	ENSCVAG00000013625	crcp	72	58.491	Cyprinodon_variegatus
ENSSSCG00000034001	-	73	63.366	ENSDARG00000069373	crcp	90	57.692	Danio_rerio
ENSSSCG00000034001	-	73	75.248	ENSDNOG00000002751	CRCP	88	68.702	Dasypus_novemcinctus
ENSSSCG00000034001	-	70	71.429	ENSDORG00000013712	Crcp	88	65.625	Dipodomys_ordii
ENSSSCG00000034001	-	73	75.248	ENSEASG00005008835	CRCP	88	68.702	Equus_asinus_asinus
ENSSSCG00000034001	-	70	74.490	ENSECAG00000011060	CRCP	86	67.969	Equus_caballus
ENSSSCG00000034001	-	59	63.529	ENSEEUG00000005796	-	87	59.130	Erinaceus_europaeus
ENSSSCG00000034001	-	73	62.376	ENSELUG00000019916	crcp	71	64.151	Esox_lucius
ENSSSCG00000034001	-	98	67.939	ENSFCAG00000022099	CRCP	88	67.939	Felis_catus
ENSSSCG00000034001	-	73	66.337	ENSFALG00000006720	CRCP	91	61.240	Ficedula_albicollis
ENSSSCG00000034001	-	73	73.267	ENSFDAG00000014337	CRCP	71	73.585	Fukomys_damarensis
ENSSSCG00000034001	-	73	60.396	ENSFHEG00000021283	crcp	72	62.264	Fundulus_heteroclitus
ENSSSCG00000034001	-	70	63.265	ENSGMOG00000011351	crcp	90	57.937	Gadus_morhua
ENSSSCG00000034001	-	95	58.730	ENSGALG00000002587	CRCP	73	67.925	Gallus_gallus
ENSSSCG00000034001	-	73	60.396	ENSGAFG00000002307	crcp	72	62.264	Gambusia_affinis
ENSSSCG00000034001	-	73	64.356	ENSGACG00000020468	crcp	74	66.038	Gasterosteus_aculeatus
ENSSSCG00000034001	-	73	66.337	ENSGAGG00000011445	CRCP	84	59.375	Gopherus_agassizii
ENSSSCG00000034001	-	73	73.267	ENSGGOG00000039733	CRCP	88	67.176	Gorilla_gorilla
ENSSSCG00000034001	-	73	64.356	ENSHBUG00000004779	crcp	88	58.915	Haplochromis_burtoni
ENSSSCG00000034001	-	73	70.297	ENSHGLG00000011719	CRCP	88	61.832	Heterocephalus_glaber_female
ENSSSCG00000034001	-	74	67.647	ENSHGLG00100005071	CRCP	69	67.647	Heterocephalus_glaber_male
ENSSSCG00000034001	-	70	58.163	ENSHCOG00000009105	crcp	73	60.194	Hippocampus_comes
ENSSSCG00000034001	-	73	61.386	ENSIPUG00000024520	CRCP	88	56.589	Ictalurus_punctatus
ENSSSCG00000034001	-	59	69.767	ENSSTOG00000008885	CRCP	86	62.931	Ictidomys_tridecemlineatus
ENSSSCG00000034001	-	73	73.267	ENSJJAG00000016893	Crcp	88	66.412	Jaculus_jaculus
ENSSSCG00000034001	-	73	60.396	ENSKMAG00000007300	crcp	88	55.814	Kryptolebias_marmoratus
ENSSSCG00000034001	-	77	62.264	ENSLBEG00000000804	crcp	74	62.264	Labrus_bergylta
ENSSSCG00000034001	-	70	64.286	ENSLOCG00000005302	crcp	86	58.730	Lepisosteus_oculatus
ENSSSCG00000034001	-	70	74.490	ENSLAFG00000027377	CRCP	88	67.969	Loxodonta_africana
ENSSSCG00000034001	-	98	67.176	ENSMFAG00000037828	CRCP	88	67.176	Macaca_fascicularis
ENSSSCG00000034001	-	98	67.176	ENSMMUG00000014524	CRCP	88	67.176	Macaca_mulatta
ENSSSCG00000034001	-	71	62.626	ENSMNEG00000030945	CRCP	97	62.626	Macaca_nemestrina
ENSSSCG00000034001	-	98	67.176	ENSMLEG00000043904	CRCP	88	67.176	Mandrillus_leucophaeus
ENSSSCG00000034001	-	73	63.366	ENSMAMG00000021168	crcp	73	65.094	Mastacembelus_armatus
ENSSSCG00000034001	-	73	63.366	ENSMZEG00005025255	crcp	88	58.140	Maylandia_zebra
ENSSSCG00000034001	-	72	65.000	ENSMGAG00000004593	CRCP	72	66.667	Meleagris_gallopavo
ENSSSCG00000034001	-	58	64.286	ENSMAUG00000018383	Crcp	100	64.286	Mesocricetus_auratus
ENSSSCG00000034001	-	98	68.702	ENSMICG00000004191	CRCP	88	68.702	Microcebus_murinus
ENSSSCG00000034001	-	70	68.367	ENSMOCG00000002717	Crcp	85	63.780	Microtus_ochrogaster
ENSSSCG00000034001	-	70	62.245	ENSMMOG00000011491	crcp	65	64.078	Mola_mola
ENSSSCG00000034001	-	86	62.500	ENSMODG00000028983	-	53	62.500	Monodelphis_domestica
ENSSSCG00000034001	-	70	59.184	ENSMALG00000020309	crcp	71	61.165	Monopterus_albus
ENSSSCG00000034001	-	73	70.297	MGP_CAROLIEiJ_G0027795	Crcp	87	65.385	Mus_caroli
ENSSSCG00000034001	-	73	70.297	ENSMUSG00000025532	Crcp	87	65.385	Mus_musculus
ENSSSCG00000034001	-	73	70.297	MGP_PahariEiJ_G0024389	Crcp	87	65.385	Mus_pahari
ENSSSCG00000034001	-	73	69.307	MGP_SPRETEiJ_G0028793	Crcp	87	64.615	Mus_spretus
ENSSSCG00000034001	-	96	67.442	ENSMPUG00000016198	CRCP	88	67.442	Mustela_putorius_furo
ENSSSCG00000034001	-	95	67.188	ENSMLUG00000012217	CRCP	88	67.188	Myotis_lucifugus
ENSSSCG00000034001	-	73	73.267	ENSNGAG00000021687	Crcp	87	67.692	Nannospalax_galili
ENSSSCG00000034001	-	60	62.069	ENSNBRG00000003094	crcp	57	56.522	Neolamprologus_brichardi
ENSSSCG00000034001	-	95	67.188	ENSNLEG00000001437	CRCP	86	67.188	Nomascus_leucogenys
ENSSSCG00000034001	-	70	72.449	ENSODEG00000014255	-	88	63.281	Octodon_degus
ENSSSCG00000034001	-	73	72.277	ENSODEG00000020033	-	89	63.359	Octodon_degus
ENSSSCG00000034001	-	69	53.333	ENSODEG00000003432	-	90	48.387	Octodon_degus
ENSSSCG00000034001	-	73	52.427	ENSONIG00000008677	crcp	88	49.618	Oreochromis_niloticus
ENSSSCG00000034001	-	72	68.317	ENSOANG00000009026	-	74	68.317	Ornithorhynchus_anatinus
ENSSSCG00000034001	-	98	66.412	ENSOCUG00000014827	CRCP	88	66.412	Oryctolagus_cuniculus
ENSSSCG00000034001	-	73	60.396	ENSORLG00000028784	crcp	88	55.814	Oryzias_latipes
ENSSSCG00000034001	-	73	60.396	ENSORLG00020017373	crcp	72	62.264	Oryzias_latipes_hni
ENSSSCG00000034001	-	73	59.406	ENSORLG00015001859	crcp	88	55.039	Oryzias_latipes_hsok
ENSSSCG00000034001	-	73	59.406	ENSOMEG00000008006	crcp	88	55.039	Oryzias_melastigma
ENSSSCG00000034001	-	70	61.856	ENSOGAG00000001914	CRCP	87	58.268	Otolemur_garnettii
ENSSSCG00000034001	-	73	73.267	ENSPPAG00000030427	CRCP	88	67.176	Pan_paniscus
ENSSSCG00000034001	-	98	67.939	ENSPPRG00000012841	CRCP	88	67.939	Panthera_pardus
ENSSSCG00000034001	-	95	63.077	ENSPTIG00000009335	CRCP	88	63.077	Panthera_tigris_altaica
ENSSSCG00000034001	-	73	73.267	ENSPTRG00000046581	CRCP	88	67.176	Pan_troglodytes
ENSSSCG00000034001	-	70	72.449	ENSPTRG00000019246	-	86	66.406	Pan_troglodytes
ENSSSCG00000034001	-	98	67.176	ENSPANG00000023118	CRCP	88	67.176	Papio_anubis
ENSSSCG00000034001	-	73	65.347	ENSPKIG00000011467	crcp	72	66.981	Paramormyrops_kingsleyae
ENSSSCG00000034001	-	70	62.245	ENSPSIG00000008385	CRCP	84	57.143	Pelodiscus_sinensis
ENSSSCG00000034001	-	70	62.245	ENSPMGG00000005986	crcp	70	64.078	Periophthalmus_magnuspinnatus
ENSSSCG00000034001	-	73	69.307	ENSPEMG00000010829	Crcp	87	64.615	Peromyscus_maniculatus_bairdii
ENSSSCG00000034001	-	73	60.396	ENSPFOG00000008626	crcp	72	62.264	Poecilia_formosa
ENSSSCG00000034001	-	73	60.396	ENSPLAG00000005996	crcp	72	62.264	Poecilia_latipinna
ENSSSCG00000034001	-	73	60.396	ENSPMEG00000020035	crcp	72	62.264	Poecilia_mexicana
ENSSSCG00000034001	-	77	57.547	ENSPREG00000008487	crcp	79	57.547	Poecilia_reticulata
ENSSSCG00000034001	-	73	73.267	ENSPPYG00000017525	CRCP	88	67.176	Pongo_abelii
ENSSSCG00000034001	-	73	64.356	ENSPNYG00000016988	crcp	88	58.915	Pundamilia_nyererei
ENSSSCG00000034001	-	73	63.366	ENSPNAG00000004712	crcp	91	57.576	Pygocentrus_nattereri
ENSSSCG00000034001	-	72	69.000	ENSRNOG00000000901	Crcp	87	64.341	Rattus_norvegicus
ENSSSCG00000034001	-	95	67.188	ENSRBIG00000039256	CRCP	86	67.188	Rhinopithecus_bieti
ENSSSCG00000034001	-	95	67.188	ENSRROG00000037982	CRCP	86	67.188	Rhinopithecus_roxellana
ENSSSCG00000034001	-	73	70.297	ENSSBOG00000011617	-	88	64.885	Saimiri_boliviensis_boliviensis
ENSSSCG00000034001	-	95	67.188	ENSSBOG00000025998	-	88	67.188	Saimiri_boliviensis_boliviensis
ENSSSCG00000034001	-	70	69.388	ENSSHAG00000007315	CRCP	88	62.992	Sarcophilus_harrisii
ENSSSCG00000034001	-	77	66.038	ENSSFOG00015013799	crcp	71	66.038	Scleropages_formosus
ENSSSCG00000034001	-	73	62.376	ENSSMAG00000019004	crcp	88	57.364	Scophthalmus_maximus
ENSSSCG00000034001	-	73	64.356	ENSSDUG00000019628	crcp	69	66.038	Seriola_dumerili
ENSSSCG00000034001	-	73	64.356	ENSSLDG00000016367	crcp	72	66.038	Seriola_lalandi_dorsalis
ENSSSCG00000034001	-	97	59.690	ENSSPUG00000002367	CRCP	88	59.690	Sphenodon_punctatus
ENSSSCG00000034001	-	73	64.356	ENSSPAG00000010443	crcp	72	66.038	Stegastes_partitus
ENSSSCG00000034001	-	68	64.583	ENSTGUG00000005354	CRCP	100	64.583	Taeniopygia_guttata
ENSSSCG00000034001	-	73	61.386	ENSTRUG00000025161	crcp	72	63.208	Takifugu_rubripes
ENSSSCG00000034001	-	73	59.223	ENSTNIG00000016137	crcp	72	61.111	Tetraodon_nigroviridis
ENSSSCG00000034001	-	98	64.885	ENSTTRG00000002888	CRCP	88	64.885	Tursiops_truncatus
ENSSSCG00000034001	-	98	67.939	ENSUMAG00000015406	CRCP	88	67.939	Ursus_maritimus
ENSSSCG00000034001	-	95	67.188	ENSVPAG00000006107	CRCP	88	67.188	Vicugna_pacos
ENSSSCG00000034001	-	98	67.939	ENSVVUG00000016521	CRCP	88	67.939	Vulpes_vulpes
ENSSSCG00000034001	-	70	61.224	ENSXETG00000025028	crcp	88	55.906	Xenopus_tropicalis
ENSSSCG00000034001	-	64	54.945	ENSXCOG00000007013	crcp	58	59.341	Xiphophorus_couchianus
ENSSSCG00000034001	-	73	60.396	ENSXMAG00000022222	crcp	72	62.264	Xiphophorus_maculatus