EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 4679 bases
Position: chr7:78199802-78204480
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000053947	Ribosomal_L29	PF00831.23	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000053153	-	297	-	ENSSSCP00000053947	98 (aa)	-	A0A287BCV2

Gene Model

Click here to download ENSSSCG00000034020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034020	-	61	65.574	ENSSSCG00000038098	-	55	65.574
ENSSSCG00000034020	-	79	63.291	ENSSSCG00000031084	-	82	63.291
ENSSSCG00000034020	-	97	72.449	ENSSSCG00000034227	RPL35	80	72.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034020	-	89	51.648	ENSFCAG00000025176	-	70	52.128	Felis_catus
ENSSSCG00000034020	-	58	55.172	ENSPPRG00000009134	-	57	55.172	Panthera_pardus
ENSSSCG00000034020	-	58	57.627	ENSPPRG00000003706	-	64	55.738	Panthera_pardus
ENSSSCG00000034020	-	59	66.102	ENSRNOG00000019037	AABR07008724.1	80	66.102	Rattus_norvegicus
ENSSSCG00000034020	-	61	57.377	ENSVVUG00000000464	-	85	51.250	Vulpes_vulpes
ENSSSCG00000034020	-	62	63.492	ENSVVUG00000012720	-	65	62.500	Vulpes_vulpes